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M747DRAFT_259523-T1, M747DRAFT_259523-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_259523-T1
Unique NameM747DRAFT_259523-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851914.1:201636..203143-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_259523-T1 ID=M747DRAFT_259523-T1|Name=M747DRAFT_259523-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1508bp|location=Sequence derived from alignment at KZ851914.1:201636..203143- (Aspergillus niger ATCC 13496)
GTTCACGACCCTGCTGTGCTTTCTAAATTGCCTGCATCTTTTGGCTGATC
GAGCCCCGTCTCTCTGTCAATTGCGAATCGCAAAGTCCTGTTCTAGCACT
TTGTGTCCTTCTCTCGCCGTTTTCCCCGCCACGAGCCTCTTCCCGACAGG
TTCTGCCTTGCCCTCACCCCGCCTTCACCACTTCCTCGAATCTCTCTCCC
CTCAGCGATCTCTTCTCTCCCTCTCACGGGCACTCGATCAACTTCCTCGC
TCTCTCGAAGCGAAGATATAGAATTTTTCTATCTTCACTATTTTCACCTC
CGGTAGTCCGACTCCGCCAGAAAGAATCATGGCGGTCCGCGCGCAGTTCG
AGAACTCCAACGAGTGAGACGCACCCCGGAGAATTTTCTGCTGGCCTGCT
TGACCATGCGGCCCAGACCTCGCAGCTTCTGGAATCTTAACTAACGTATT
CCTTGTTTTCCAGAGTCGGTGTTTTCTCCCGTCTCACCAACTCGTACGCT
ATTGTTGCCATTGGCGCCTCCGAGAACTTCTACAGGTGCTTATATACCCG
TTTCTGCCAGAACCACAAACCAGTCCCATTAACGCTCCTTCCAGTGTATT
CGAGGCCGAATTGCAAGATGTCATTCCCATCTGCCACGCAACCATTGCCG
GAACCCGCATCGTTGGCCGTCTGACGGCAGGGTATGTCTAGATCCGATAT
CCATTTGGATCTCTGTATCAACCCCGCTGACCATCTTGCCCCCAATATCA
GAAACCGTAATGGTCTCCTCGTCCCCACCACCACGACAGACCAAGAGCTT
CAACATCTCCGGAATACGCTACCCGAATCGGTAAAGATTCAACGTATAGA
GGAACGTCTATCGGCTCTGGGGAACGTCATCTGCTGCAATGACCATGTTG
CGCTGATCCACCCGGATCTCGAGCGGGAAACCGAAGAGATGTATGTCGTG
CTGCCAATATCTGCAAGTACTGCGCTCAATGCTAACATGCTAAACCAACA
GCATCGCCGATGTCCTCGGTGTCGAAGTCTTCCGTCAAACCGTCGCCGAT
AACGTCCTGACTGGCTCCTACATGGCCCTCTCCAACCAAGGTGGTATCGT
CCACCCCAAGACCTCCATCCGTGACCAGGATGAACTTTCCTCCCTCCTGC
AAGTGCCCCTCGTCGCTGGTAGTGTCAACCGCGGTAGCCCCGTCGTCGGT
GCCGGCATGGTCGTGAACGACTGGCTCGCTGTCACGGGTCTGGACACGAC
AGCCACGGAATTGAGTGTCATTGAAAGTGTCTTCCGTCTGGGTGAGATGG
GTCCCCGTGGTGTTGGAATGGGCGACGCCAACAAGGAGAGTATTGTGGAG
AGTTTCTACTAGAGGGTTTCACATTTTCTTTCATCATCACGCTGTTTCCT
TTTGTTTTTTTCTTTTTTCTTTCTCGAACATACATGAATATCCTTATTGT
GCTATGAATGAATGGAATGGGTAGAATATCCGGGGGTGTGTCTGTGGATT
GACTGGAC
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Coding sequence (CDS) from alignment at KZ851914.1:201636..203143-

>M747DRAFT_259523-T1 ID=M747DRAFT_259523-T1|Name=M747DRAFT_259523-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3720bp|location=Sequence derived from alignment at KZ851914.1:201636..203143- (Aspergillus niger ATCC 13496)
CATCGCCGATGTCCTCGGTGTCGAAGTCTTCCGTCAAACCGTCGCCGATA
ACGTCCTGACTGGCTCCTACATGGCCCTCTCCAACCAAGGTGGTATCGTC
CACCCCAAGACCTCCATCCGTGACCAGGATGAACTTTCCTCCCTCCTGCA
AGTGCCCCTCGTCGCTGGTAGTGTCAACCGCGGTAGCCCCGTCGTCGGTG
CCGGCATGGTCGTGAACGACTGGCTCGCTGTCACGGGTCTGGACACGACA
GCCACGGAATTGAGTGTCATTGAAAGTGTCTTCCGTCTGGGTGAGATGGG
TCCCCGTGGTGTTGGAATGGGCGACGCCAACAAGGAGAGTATTGTGGAGA
GTTTCTACTAGAAACCGTAATGGTCTCCTCGTCCCCACCACCACGACAGA
CCAAGAGCTTCAACATCTCCGGAATACGCTACCCGAATCGGTAAAGATTC
AACGTATAGAGGAACGTCTATCGGCTCTGGGGAACGTCATCTGCTGCAAT
GACCATGTTGCGCTGATCCACCCGGATCTCGAGCGGGAAACCGAAGAGAT
TGTATTCGAGGCCGAATTGCAAGATGTCATTCCCATCTGCCACGCAACCA
TTGCCGGAACCCGCATCGTTGGCCGTCTGACGGCAGGAGTCGGTGTTTTC
TCCCGTCTCACCAACTCGTACGCTATTGTTGCCATTGGCGCCTCCGAGAA
CTTCTACAGATGGCGGTCCGCGCGCAGTTCGAGAACTCCAACGACATCGC
CGATGTCCTCGGTGTCGAAGTCTTCCGTCAAACCGTCGCCGATAACGTCC
TGACTGGCTCCTACATGGCCCTCTCCAACCAAGGTGGTATCGTCCACCCC
AAGACCTCCATCCGTGACCAGGATGAACTTTCCTCCCTCCTGCAAGTGCC
CCTCGTCGCTGGTAGTGTCAACCGCGGTAGCCCCGTCGTCGGTGCCGGCA
TGGTCGTGAACGACTGGCTCGCTGTCACGGGTCTGGACACGACAGCCACG
GAATTGAGTGTCATTGAAAGTGTCTTCCGTCTGGGTGAGATGGGTCCCCG
TGGTGTTGGAATGGGCGACGCCAACAAGGAGAGTATTGTGGAGAGTTTCT
ACTAGAAACCGTAATGGTCTCCTCGTCCCCACCACCACGACAGACCAAGA
GCTTCAACATCTCCGGAATACGCTACCCGAATCGGTAAAGATTCAACGTA
TAGAGGAACGTCTATCGGCTCTGGGGAACGTCATCTGCTGCAATGACCAT
GTTGCGCTGATCCACCCGGATCTCGAGCGGGAAACCGAAGAGATTGTATT
CGAGGCCGAATTGCAAGATGTCATTCCCATCTGCCACGCAACCATTGCCG
GAACCCGCATCGTTGGCCGTCTGACGGCAGGAGTCGGTGTTTTCTCCCGT
CTCACCAACTCGTACGCTATTGTTGCCATTGGCGCCTCCGAGAACTTCTA
CAGATGGCGGTCCGCGCGCAGTTCGAGAACTCCAACGACATCGCCGATGT
CCTCGGTGTCGAAGTCTTCCGTCAAACCGTCGCCGATAACGTCCTGACTG
GCTCCTACATGGCCCTCTCCAACCAAGGTGGTATCGTCCACCCCAAGACC
TCCATCCGTGACCAGGATGAACTTTCCTCCCTCCTGCAAGTGCCCCTCGT
CGCTGGTAGTGTCAACCGCGGTAGCCCCGTCGTCGGTGCCGGCATGGTCG
TGAACGACTGGCTCGCTGTCACGGGTCTGGACACGACAGCCACGGAATTG
AGTGTCATTGAAAGTGTCTTCCGTCTGGGTGAGATGGGTCCCCGTGGTGT
TGGAATGGGCGACGCCAACAAGGAGAGTATTGTGGAGAGTTTCTACTAGA
AACCGTAATGGTCTCCTCGTCCCCACCACCACGACAGACCAAGAGCTTCA
ACATCTCCGGAATACGCTACCCGAATCGGTAAAGATTCAACGTATAGAGG
AACGTCTATCGGCTCTGGGGAACGTCATCTGCTGCAATGACCATGTTGCG
CTGATCCACCCGGATCTCGAGCGGGAAACCGAAGAGATTGTATTCGAGGC
CGAATTGCAAGATGTCATTCCCATCTGCCACGCAACCATTGCCGGAACCC
GCATCGTTGGCCGTCTGACGGCAGGAGTCGGTGTTTTCTCCCGTCTCACC
AACTCGTACGCTATTGTTGCCATTGGCGCCTCCGAGAACTTCTACAGATG
GCGGTCCGCGCGCAGTTCGAGAACTCCAACGACATCGCCGATGTCCTCGG
TGTCGAAGTCTTCCGTCAAACCGTCGCCGATAACGTCCTGACTGGCTCCT
ACATGGCCCTCTCCAACCAAGGTGGTATCGTCCACCCCAAGACCTCCATC
CGTGACCAGGATGAACTTTCCTCCCTCCTGCAAGTGCCCCTCGTCGCTGG
TAGTGTCAACCGCGGTAGCCCCGTCGTCGGTGCCGGCATGGTCGTGAACG
ACTGGCTCGCTGTCACGGGTCTGGACACGACAGCCACGGAATTGAGTGTC
ATTGAAAGTGTCTTCCGTCTGGGTGAGATGGGTCCCCGTGGTGTTGGAAT
GGGCGACGCCAACAAGGAGAGTATTGTGGAGAGTTTCTACTAGAAACCGT
AATGGTCTCCTCGTCCCCACCACCACGACAGACCAAGAGCTTCAACATCT
CCGGAATACGCTACCCGAATCGGTAAAGATTCAACGTATAGAGGAACGTC
TATCGGCTCTGGGGAACGTCATCTGCTGCAATGACCATGTTGCGCTGATC
CACCCGGATCTCGAGCGGGAAACCGAAGAGATTGTATTCGAGGCCGAATT
GCAAGATGTCATTCCCATCTGCCACGCAACCATTGCCGGAACCCGCATCG
TTGGCCGTCTGACGGCAGGAGTCGGTGTTTTCTCCCGTCTCACCAACTCG
TACGCTATTGTTGCCATTGGCGCCTCCGAGAACTTCTACAGATGGCGGTC
CGCGCGCAGTTCGAGAACTCCAACGACATCGCCGATGTCCTCGGTGTCGA
AGTCTTCCGTCAAACCGTCGCCGATAACGTCCTGACTGGCTCCTACATGG
CCCTCTCCAACCAAGGTGGTATCGTCCACCCCAAGACCTCCATCCGTGAC
CAGGATGAACTTTCCTCCCTCCTGCAAGTGCCCCTCGTCGCTGGTAGTGT
CAACCGCGGTAGCCCCGTCGTCGGTGCCGGCATGGTCGTGAACGACTGGC
TCGCTGTCACGGGTCTGGACACGACAGCCACGGAATTGAGTGTCATTGAA
AGTGTCTTCCGTCTGGGTGAGATGGGTCCCCGTGGTGTTGGAATGGGCGA
CGCCAACAAGGAGAGTATTGTGGAGAGTTTCTACTAGAAACCGTAATGGT
CTCCTCGTCCCCACCACCACGACAGACCAAGAGCTTCAACATCTCCGGAA
TACGCTACCCGAATCGGTAAAGATTCAACGTATAGAGGAACGTCTATCGG
CTCTGGGGAACGTCATCTGCTGCAATGACCATGTTGCGCTGATCCACCCG
GATCTCGAGCGGGAAACCGAAGAGATTGTATTCGAGGCCGAATTGCAAGA
TGTCATTCCCATCTGCCACGCAACCATTGCCGGAACCCGCATCGTTGGCC
GTCTGACGGCAGGAGTCGGTGTTTTCTCCCGTCTCACCAACTCGTACGCT
ATTGTTGCCATTGGCGCCTCCGAGAACTTCTACAGATGGCGGTCCGCGCG
CAGTTCGAGAACTCCAACGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0042256mature ribosome assembly
Vocabulary: Molecular Function
TermDefinition
GO:0043022ribosome binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TIF6M747DRAFT_259523Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_259523-T1M747DRAFT_259523-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_259523-T1.cdsM747DRAFT_259523-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_259523-T1.utr3p1M747DRAFT_259523-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_259523-T1.exon5M747DRAFT_259523-T1.exon5Aspergillus niger ATCC 13496exon
M747DRAFT_259523-T1.exon4M747DRAFT_259523-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_259523-T1.exon3M747DRAFT_259523-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_259523-T1.exon2M747DRAFT_259523-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_259523-T1.exon1M747DRAFT_259523-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_259523-T1.utr5p1M747DRAFT_259523-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092644O2
DBxrefInterPro:IPR002769
DBxrefPFAM:PF01912
ProductEukaryotic translation initiation factor 6
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851914.1supercontigKZ851914.1:201636..203143 -
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