|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851916.1:117289..119367+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_260378-T1 ID=M747DRAFT_260378-T1|Name=M747DRAFT_260378-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2079bp|location=Sequence derived from alignment at KZ851916.1:117289..119367+ (Aspergillus niger ATCC 13496)
GAACCCAACTTTAGCTTTTGCCTTCAACTTATGTTATCTACTCTGTAGTG
TCTGACACCTTTATTCCTGTCTCTGCAAGCACTATGTCAATGCGATCAAA
TCCGTAACAATGAGTGAAACGTGCGCCAATCCCCTACTACTGGGGTGGAT
CAAAGAATGGCTAGACGAGGCTCGAGAACGCAACAGCAAGGGCGCCATAG
TGTCAGTACTATTTCATGACGCGATACAATGATCGAATTTGATGCTGAAT
TATGCACAGATACAAAAAGGCGTACGAGTCGATGAAAGCTTGTCCCTTAG
TTTTCCAACACCCCTCCGAGGCTCAGCAGCTAAATGGACTCGGCCCAAAA
CTATGTGATCGCTTGACCGAAAAGCTAAAGGCTTACTGCGAAGAAAATGC
ACTTCCAATGCCCGAACATCCTCAAAAATGTAAGTCTCGGTAGTACTGTC
GTGTCTGAGCAGGCCCTAAAAATCGTAGCGGCAAGCAGCAAAAGAGCATC
CGATGAGGGCACAGCAGAAAGTCAGCCAGCCAAGAAACCTCGAAAGGCAA
GACCTTATGTCCCGACTTTACGATCTGGCCCGTATGCGTTGATTTTAGCC
CTGGCAACCCTTAATGAGAACTCTTCTCAAGGCCTAACCAAGGCACAACT
GATTGACTTGGCGCAGCCGAATTGCGATAGTTCATTCACGGCACCTGCCG
AGTCGTCCAAATTCCATACTGCCTGGAGCTCAATGAAGACGCTCTTGCAG
AAGGAGATTGTATATGATTTCGGGCGTCCTCTGAAGAAGTACGCACTCAC
AGAAGAGGGATGGGAGGTGGCGAAAAGGATGAAGAAGGTCGCCCTGCCGT
CAAATCAAGGCACTTTGGCGTTTGGGAATCAATCGGTAACAAATCCAATA
CCTAATATGCTATGACGATGTCTAACCTGCGTAGGGGCCAAGCACAAGCC
ATACTGGGGACACCCAGTTGCAGGACAACATGGGTGGCAACGGCACAGAG
CTAATCGACGATGAGGAGACACCCACAGCCCATAACGATACCCAAAGATG
GGAACCTGCTTCTGACGGAACAGTAACTCCCATAACAATCCCTCCCGACA
GCTTTACGGTCCAGCTGGTTCTGGATAACCGCGAAGTTCGATCATCCAAA
GACAGAGATTACATCACCAACGAACTACACAAGAAGGGAGCCAGTCCCGA
GGTGCGCGCACTAGAACTAGGCGACGTCATGTGGGTAGCTAAATTCCACA
ATCCGACGTTCCTCTCCCAGTACGGCGAGGAAGGCGACGAAGTCATGCTC
GACTGGATCGTTGAGCGCAAAAGAATCGACGATCTCATCAGCTCCATGAA
AGACGGACGGTTCCACGAACAGAAGTTCCGTCTCCGTCGTTCAGGAGTGA
AAAACGTCATCTACCTCATTGAAGAATTCACCGTCCCCTCAGACCCTAAT
ACCGCCATGGCCGGCAAGTACAACGAAATGGTAGCGTCCGCCATAGCCTC
GACGCAAGTCGTCAACGGCTACTTTGTTAAGAGAACTAAGAACCTCGACG
ATACAATTCAATACCTAGCTAGAATGACCCTCCTGCTTCGCAGAATGTTC
AATTCATCTGCCGGCGGTGTACCATCCTCCACCCTCAGTCTAATCCCTAG
TCGCCAGCTCTCCTCCTCCCAATCATACCTCACGGCCCTGGAACGTCTCC
GGGCAGAGAGCCCCAAGACCACTTACGCCGTCACCTTCTCCACATTTTCC
GCTCTAACCTCCAAATCCGACGTCTTGACCCTCCGAGACGTGTTCCTGAA
AATGCTCATGTGCATCCGGGGCGTAACGGGCGAAAAGGCACTCGAGATTC
AACGGCGGTGGCCGACTCCGCAGGCATTCATCCGTGCTTTTGAAGAGCTT
GATCCTCAGGACCGGGATAATATGGTTTCAGAACGGATGCAAACGCTCGT
TGGACGGAAGAAGATCGCGAAGGTTCTGAGCAAGAAAATCGCAGAGGTAT
GGGGTGAGGATGGGTGATCATTTTTCAGGGGGATTGGTACCTTTTCAGAA
TTGAATTGCGAGCGAATGCATTAGAGCGG back to topCoding sequence (CDS) from alignment at KZ851916.1:117289..119367+ >M747DRAFT_260378-T1 ID=M747DRAFT_260378-T1|Name=M747DRAFT_260378-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=7008bp|location=Sequence derived from alignment at KZ851916.1:117289..119367+ (Aspergillus niger ATCC 13496)
ATGAGTGAAACGTGCGCCAATCCCCTACTACTGGGGTGGATCAAAGAATG
GCTAGACGAGGCTCGAGAACGCAACAGCAAGGGCGCCATAGTATACAAAA
AGGCGTACGAGTCGATGAAAGCTTGTCCCTTAGTTTTCCAACACCCCTCC
GAGGCTCAGCAGCTAAATGGACTCGGCCCAAAACTATGTGATCGCTTGAC
CGAAAAGCTAAAGGCTTACTGCGAAGAAAATGCACTTCCAATGCCCGAAC
ATCCTCAAAAATCGGCAAGCAGCAAAAGAGCATCCGATGAGGGCACAGCA
GAAAGTCAGCCAGCCAAGAAACCTCGAAAGGCAAGACCTTATGTCCCGAC
TTTACGATCTGGCCCGTATGCGTTGATTTTAGCCCTGGCAACCCTTAATG
AGAACTCTTCTCAAGGCCTAACCAAGGCACAACTGATTGACTTGGCGCAG
CCGAATTGCGATAGTTCATTCACGGCACCTGCCGAGTCGTCCAAATTCCA
TACTGCCTGGAGCTCAATGAAGACGCTCTTGCAGAAGGAGATTGTATATG
ATTTCGGGCGTCCTCTGAAGAAGTACGCACTCACAGAAGAGGGATGGGAG
GTGGCGAAAAGGATGAAGAAGGTCGCCCTGCCGTCAAATCAAGGCACTTT
GGCGTTTGGGAATCAATCGGGGCCAAGCACAAGCCATACTGGGGACACCC
AGTTGCAGGACAACATGGGTGGCAACGGCACAGAGCTAATCGACGATGAG
GAGACACCCACAGCCCATAACGATACCCAAAGATGGGAACCTGCTTCTGA
CGGAACAGTAACTCCCATAACAATCCCTCCCGACAGCTTTACGGTCCAGC
TGGTTCTGGATAACCGCGAAGTTCGATCATCCAAAGACAGAGATTACATC
ACCAACGAACTACACAAGAAGGGAGCCAGTCCCGAGGTGCGCGCACTAGA
ACTAGGCGACGTCATGTGGGTAGCTAAATTCCACAATCCGACGTTCCTCT
CCCAGTACGGCGAGGAAGGCGACGAAGTCATGCTCGACTGGATCGTTGAG
CGCAAAAGAATCGACGATCTCATCAGCTCCATGAAAGACGGACGGTTCCA
CGAACAGAAGTTCCGTCTCCGTCGTTCAGGAGTGAAAAACGTCATCTACC
TCATTGAAGAATTCACCGTCCCCTCAGACCCTAATACCGCCATGGCCGGC
AAGTACAACGAAATGGTAGCGTCCGCCATAGCCTCGACGCAAGTCGTCAA
CGGCTACTTTGTTAAGAGAACTAAGAACCTCGACGATACAATTCAATACC
TAGCTAGAATGACCCTCCTGCTTCGCAGAATGTTCAATTCATCTGCCGGC
GGTGTACCATCCTCCACCCTCAGTCTAATCCCTAGTCGCCAGCTCTCCTC
CTCCCAATCATACCTCACGGCCCTGGAACGTCTCCGGGCAGAGAGCCCCA
AGACCACTTACGCCGTCACCTTCTCCACATTTTCCGCTCTAACCTCCAAA
TCCGACGTCTTGACCCTCCGAGACGTGTTCCTGAAAATGCTCATGTGCAT
CCGGGGCGTAACGGGCGAAAAGGCACTCGAGATTCAACGGCGGTGGCCGA
CTCCGCAGGCATTCATCCGTGCTTTTGAAGAGCTTGATCCTCAGGACCGG
GATAATATGGTTTCAGAACGGATGCAAACGCTCGTTGGACGGAAGAAGAT
CGCGAAGGTTCTGAGCAAGAAAATCGCAGAGGTATGGGGTGAGGATGGGT
GAATGAGTGAAACGTGCGCCAATCCCCTACTACTGGGGTGGATCAAAGAA
TGGCTAGACGAGGCTCGAGAACGCAACAGCAAGGGCGCCATAGTATACAA
AAAGGCGTACGAGTCGATGAAAGCTTGTCCCTTAGTTTTCCAACACCCCT
CCGAGGCTCAGCAGCTAAATGGACTCGGCCCAAAACTATGTGATCGCTTG
ACCGAAAAGCTAAAGGCTTACTGCGAAGAAAATGCACTTCCAATGCCCGA
ACATCCTCAAAAATCGGCAAGCAGCAAAAGAGCATCCGATGAGGGCACAG
CAGAAAGTCAGCCAGCCAAGAAACCTCGAAAGGCAAGACCTTATGTCCCG
ACTTTACGATCTGGCCCGTATGCGTTGATTTTAGCCCTGGCAACCCTTAA
TGAGAACTCTTCTCAAGGCCTAACCAAGGCACAACTGATTGACTTGGCGC
AGCCGAATTGCGATAGTTCATTCACGGCACCTGCCGAGTCGTCCAAATTC
CATACTGCCTGGAGCTCAATGAAGACGCTCTTGCAGAAGGAGATTGTATA
TGATTTCGGGCGTCCTCTGAAGAAGTACGCACTCACAGAAGAGGGATGGG
AGGTGGCGAAAAGGATGAAGAAGGTCGCCCTGCCGTCAAATCAAGGCACT
TTGGCGTTTGGGAATCAATCGGGGCCAAGCACAAGCCATACTGGGGACAC
CCAGTTGCAGGACAACATGGGTGGCAACGGCACAGAGCTAATCGACGATG
AGGAGACACCCACAGCCCATAACGATACCCAAAGATGGGAACCTGCTTCT
GACGGAACAGTAACTCCCATAACAATCCCTCCCGACAGCTTTACGGTCCA
GCTGGTTCTGGATAACCGCGAAGTTCGATCATCCAAAGACAGAGATTACA
TCACCAACGAACTACACAAGAAGGGAGCCAGTCCCGAGGTGCGCGCACTA
GAACTAGGCGACGTCATGTGGGTAGCTAAATTCCACAATCCGACGTTCCT
CTCCCAGTACGGCGAGGAAGGCGACGAAGTCATGCTCGACTGGATCGTTG
AGCGCAAAAGAATCGACGATCTCATCAGCTCCATGAAAGACGGACGGTTC
CACGAACAGAAGTTCCGTCTCCGTCGTTCAGGAGTGAAAAACGTCATCTA
CCTCATTGAAGAATTCACCGTCCCCTCAGACCCTAATACCGCCATGGCCG
GCAAGTACAACGAAATGGTAGCGTCCGCCATAGCCTCGACGCAAGTCGTC
AACGGCTACTTTGTTAAGAGAACTAAGAACCTCGACGATACAATTCAATA
CCTAGCTAGAATGACCCTCCTGCTTCGCAGAATGTTCAATTCATCTGCCG
GCGGTGTACCATCCTCCACCCTCAGTCTAATCCCTAGTCGCCAGCTCTCC
TCCTCCCAATCATACCTCACGGCCCTGGAACGTCTCCGGGCAGAGAGCCC
CAAGACCACTTACGCCGTCACCTTCTCCACATTTTCCGCTCTAACCTCCA
AATCCGACGTCTTGACCCTCCGAGACGTGTTCCTGAAAATGCTCATGTGC
ATCCGGGGCGTAACGGGCGAAAAGGCACTCGAGATTCAACGGCGGTGGCC
GACTCCGCAGGCATTCATCCGTGCTTTTGAAGAGCTTGATCCTCAGGACC
GGGATAATATGGTTTCAGAACGGATGCAAACGCTCGTTGGACGGAAGAAG
ATCGCGAAGGTTCTGAGCAAGAAAATCGCAGAGGTATGGGGTGAGGATGG
GTGAATGAGTGAAACGTGCGCCAATCCCCTACTACTGGGGTGGATCAAAG
AATGGCTAGACGAGGCTCGAGAACGCAACAGCAAGGGCGCCATAGTATAC
AAAAAGGCGTACGAGTCGATGAAAGCTTGTCCCTTAGTTTTCCAACACCC
CTCCGAGGCTCAGCAGCTAAATGGACTCGGCCCAAAACTATGTGATCGCT
TGACCGAAAAGCTAAAGGCTTACTGCGAAGAAAATGCACTTCCAATGCCC
GAACATCCTCAAAAATCGGCAAGCAGCAAAAGAGCATCCGATGAGGGCAC
AGCAGAAAGTCAGCCAGCCAAGAAACCTCGAAAGGCAAGACCTTATGTCC
CGACTTTACGATCTGGCCCGTATGCGTTGATTTTAGCCCTGGCAACCCTT
AATGAGAACTCTTCTCAAGGCCTAACCAAGGCACAACTGATTGACTTGGC
GCAGCCGAATTGCGATAGTTCATTCACGGCACCTGCCGAGTCGTCCAAAT
TCCATACTGCCTGGAGCTCAATGAAGACGCTCTTGCAGAAGGAGATTGTA
TATGATTTCGGGCGTCCTCTGAAGAAGTACGCACTCACAGAAGAGGGATG
GGAGGTGGCGAAAAGGATGAAGAAGGTCGCCCTGCCGTCAAATCAAGGCA
CTTTGGCGTTTGGGAATCAATCGGGGCCAAGCACAAGCCATACTGGGGAC
ACCCAGTTGCAGGACAACATGGGTGGCAACGGCACAGAGCTAATCGACGA
TGAGGAGACACCCACAGCCCATAACGATACCCAAAGATGGGAACCTGCTT
CTGACGGAACAGTAACTCCCATAACAATCCCTCCCGACAGCTTTACGGTC
CAGCTGGTTCTGGATAACCGCGAAGTTCGATCATCCAAAGACAGAGATTA
CATCACCAACGAACTACACAAGAAGGGAGCCAGTCCCGAGGTGCGCGCAC
TAGAACTAGGCGACGTCATGTGGGTAGCTAAATTCCACAATCCGACGTTC
CTCTCCCAGTACGGCGAGGAAGGCGACGAAGTCATGCTCGACTGGATCGT
TGAGCGCAAAAGAATCGACGATCTCATCAGCTCCATGAAAGACGGACGGT
TCCACGAACAGAAGTTCCGTCTCCGTCGTTCAGGAGTGAAAAACGTCATC
TACCTCATTGAAGAATTCACCGTCCCCTCAGACCCTAATACCGCCATGGC
CGGCAAGTACAACGAAATGGTAGCGTCCGCCATAGCCTCGACGCAAGTCG
TCAACGGCTACTTTGTTAAGAGAACTAAGAACCTCGACGATACAATTCAA
TACCTAGCTAGAATGACCCTCCTGCTTCGCAGAATGTTCAATTCATCTGC
CGGCGGTGTACCATCCTCCACCCTCAGTCTAATCCCTAGTCGCCAGCTCT
CCTCCTCCCAATCATACCTCACGGCCCTGGAACGTCTCCGGGCAGAGAGC
CCCAAGACCACTTACGCCGTCACCTTCTCCACATTTTCCGCTCTAACCTC
CAAATCCGACGTCTTGACCCTCCGAGACGTGTTCCTGAAAATGCTCATGT
GCATCCGGGGCGTAACGGGCGAAAAGGCACTCGAGATTCAACGGCGGTGG
CCGACTCCGCAGGCATTCATCCGTGCTTTTGAAGAGCTTGATCCTCAGGA
CCGGGATAATATGGTTTCAGAACGGATGCAAACGCTCGTTGGACGGAAGA
AGATCGCGAAGGTTCTGAGCAAGAAAATCGCAGAGGTATGGGGTGAGGAT
GGGTGAATGAGTGAAACGTGCGCCAATCCCCTACTACTGGGGTGGATCAA
AGAATGGCTAGACGAGGCTCGAGAACGCAACAGCAAGGGCGCCATAGTAT
ACAAAAAGGCGTACGAGTCGATGAAAGCTTGTCCCTTAGTTTTCCAACAC
CCCTCCGAGGCTCAGCAGCTAAATGGACTCGGCCCAAAACTATGTGATCG
CTTGACCGAAAAGCTAAAGGCTTACTGCGAAGAAAATGCACTTCCAATGC
CCGAACATCCTCAAAAATCGGCAAGCAGCAAAAGAGCATCCGATGAGGGC
ACAGCAGAAAGTCAGCCAGCCAAGAAACCTCGAAAGGCAAGACCTTATGT
CCCGACTTTACGATCTGGCCCGTATGCGTTGATTTTAGCCCTGGCAACCC
TTAATGAGAACTCTTCTCAAGGCCTAACCAAGGCACAACTGATTGACTTG
GCGCAGCCGAATTGCGATAGTTCATTCACGGCACCTGCCGAGTCGTCCAA
ATTCCATACTGCCTGGAGCTCAATGAAGACGCTCTTGCAGAAGGAGATTG
TATATGATTTCGGGCGTCCTCTGAAGAAGTACGCACTCACAGAAGAGGGA
TGGGAGGTGGCGAAAAGGATGAAGAAGGTCGCCCTGCCGTCAAATCAAGG
CACTTTGGCGTTTGGGAATCAATCGGGGCCAAGCACAAGCCATACTGGGG
ACACCCAGTTGCAGGACAACATGGGTGGCAACGGCACAGAGCTAATCGAC
GATGAGGAGACACCCACAGCCCATAACGATACCCAAAGATGGGAACCTGC
TTCTGACGGAACAGTAACTCCCATAACAATCCCTCCCGACAGCTTTACGG
TCCAGCTGGTTCTGGATAACCGCGAAGTTCGATCATCCAAAGACAGAGAT
TACATCACCAACGAACTACACAAGAAGGGAGCCAGTCCCGAGGTGCGCGC
ACTAGAACTAGGCGACGTCATGTGGGTAGCTAAATTCCACAATCCGACGT
TCCTCTCCCAGTACGGCGAGGAAGGCGACGAAGTCATGCTCGACTGGATC
GTTGAGCGCAAAAGAATCGACGATCTCATCAGCTCCATGAAAGACGGACG
GTTCCACGAACAGAAGTTCCGTCTCCGTCGTTCAGGAGTGAAAAACGTCA
TCTACCTCATTGAAGAATTCACCGTCCCCTCAGACCCTAATACCGCCATG
GCCGGCAAGTACAACGAAATGGTAGCGTCCGCCATAGCCTCGACGCAAGT
CGTCAACGGCTACTTTGTTAAGAGAACTAAGAACCTCGACGATACAATTC
AATACCTAGCTAGAATGACCCTCCTGCTTCGCAGAATGTTCAATTCATCT
GCCGGCGGTGTACCATCCTCCACCCTCAGTCTAATCCCTAGTCGCCAGCT
CTCCTCCTCCCAATCATACCTCACGGCCCTGGAACGTCTCCGGGCAGAGA
GCCCCAAGACCACTTACGCCGTCACCTTCTCCACATTTTCCGCTCTAACC
TCCAAATCCGACGTCTTGACCCTCCGAGACGTGTTCCTGAAAATGCTCAT
GTGCATCCGGGGCGTAACGGGCGAAAAGGCACTCGAGATTCAACGGCGGT
GGCCGACTCCGCAGGCATTCATCCGTGCTTTTGAAGAGCTTGATCCTCAG
GACCGGGATAATATGGTTTCAGAACGGATGCAAACGCTCGTTGGACGGAA
GAAGATCGCGAAGGTTCTGAGCAAGAAAATCGCAGAGGTATGGGGTGAGG
ATGGGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004518 | nuclease activity |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011335 |
| DBxref | InterPro:IPR027421 |
| DBxref | InterPro:IPR036388 |
| DBxref | InterPro:IPR006166 |
| DBxref | PFAM:PF02732 |
| Product | Crossover junction endonuclease mus81 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851916.1 | supercontig | KZ851916.1:117289..119367 + |
|
