You are here

Home

M747DRAFT_261810-T1, M747DRAFT_261810-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_261810-T1
Unique NameM747DRAFT_261810-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851920.1:30273..31850-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_261810-T1 ID=M747DRAFT_261810-T1|Name=M747DRAFT_261810-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1578bp|location=Sequence derived from alignment at KZ851920.1:30273..31850- (Aspergillus niger ATCC 13496)
CATTCATTCTCTTTCATTCATTCTTCCTTAATCTCTCCTTTTAACCGTCG
CAATGGATCCTTTTTCTGCAGAGGGTGGTATGTTTTGTCCATTGAGCAAA
CACACACATACAATCCCCCCTTATGACCTCAAAGCGCTAACTTGCCTCAT
CCCCCCAATAACAGAGCTAATCAACATCCACAATGCCTTTCACCAAGGCC
AATACCAAGCCGTAATCGAATTCGACACCTCCGCTCTATCCCCCGAGAAC
CAACTCCCTGCCCGTGTCCTCCAGCTTCGCGCCAAGATCGCCCTAGGCCA
ATCAGATGAAGTTCTCGCCGATGTCGAAGGCGAGGAAGAGACCCCCGATC
TAGCGGCCGTGAAAGCGCTGGCCCAGCAGTCGACTGGAGATGCCGAATCG
GCGTTGAAGCTGGCTCAGGACCTTGCGGAGAATTACCCCGACAATGCTAC
TGTACAGGTTCTGTGCGGGACGTTGCTGCAGGCTCAGGGACAAAGTGAGG
ATGCGTTGGCTTTATTGACCAAGCATCAGGGGAACCTCGAGGCGTGAGTT
TTAGCCGTCAATTTGCCATGTGCACTGTCTGTATAATGGGTGGAACTCAG
GAAGCTAATGGACAATGATATAGTGTGGCCTTGATCGTCCAGATTCATCT
TCAGCAGAACCGCTCTGATCTCGCCTTGAAGGAAGTCCAGGCTGCAAAGC
GCTGGGCGCAGGATTCCCTCTTGGTTAACTTGGCTGAGTCGTGGGTGGGA
ATGAGAGTGGTATGTGTCACACCCTGCTGCAGCCTCCTTGCTGTTTGTTC
GAGGGTAAGCGATGAAACTAATATGCTGTTGCTTCGGCTTTTAGGGCGGC
GAGAAATACCAGGCTGCATTCTACGTCTACGAGGAATTGGCTTCCGCTCC
TAGCAGCTCCGCGCCCCTCTCTATCGTTGGTCAGGCCGTGGCAGAACTCC
ATCTCGGTCGGTTGCCTGAGGCCGAGGCCGCCTTGACTGCAGCTCTGCAG
CAGTATCCCGACGAGGCGGAACTGATTGCGAACACTGTTGTGCTGAACGT
CTTGGCTGGCAAGCCCTCGGAAGAGTTGGAGCAGTACGTTCACCCTCCTA
CCCCTAAACCCATCGATCTGCGGACGAATGTGTAGCTAACGCATGCATTG
CACTTACTATAGGCGCCTCGAACAGATCAACCCCGCGCACCCCCTGCTCT
CCGATCTTCAAGCAAAGAGTGAACTGTTCGATACCGCGGCTGCGAAGTAT
GCTCCCAGAGTGTCGGCTTAATCTAGGATATCCGTTGTTTACTTTTGTGC
TGCTTGCATTGTTTTTGTCTCCTGATCTCCATCTTGTACCCCTCTTCTTG
CTCCCTGGGCGTGATATTGTTTCCGATTATGAATTGATACGACGGCGTAG
CTATGTGTAAGCTAGTTATTGTCCAGCGAATGCTTCCTGCCTTATCCTAT
TTTGCCCCGTCTAGTCTGCACTTGCCCGTTTTCTGTGTATAACGAGGGAC
CAAGAATCTACCAGTATCAGCAGACAGGCTGATAGATTATATTAGTTGTA
CGTTATTTGGTGTACCTTCCCCAATTTG
back to top

Coding sequence (CDS) from alignment at KZ851920.1:30273..31850-

>M747DRAFT_261810-T1 ID=M747DRAFT_261810-T1|Name=M747DRAFT_261810-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3900bp|location=Sequence derived from alignment at KZ851920.1:30273..31850- (Aspergillus niger ATCC 13496)
GCGCCTCGAACAGATCAACCCCGCGCACCCCCTGCTCTCCGATCTTCAAG
CAAAGAGTGAACTGTTCGATACCGCGGCTGCGAAGTATGCTCCCAGAGTG
TCGGCTTAAGGCGGCGAGAAATACCAGGCTGCATTCTACGTCTACGAGGA
ATTGGCTTCCGCTCCTAGCAGCTCCGCGCCCCTCTCTATCGTTGGTCAGG
CCGTGGCAGAACTCCATCTCGGTCGGTTGCCTGAGGCCGAGGCCGCCTTG
ACTGCAGCTCTGCAGCAGTATCCCGACGAGGCGGAACTGATTGCGAACAC
TGTTGTGCTGAACGTCTTGGCTGGCAAGCCCTCGGAAGAGTTGGAGCATG
TGGCCTTGATCGTCCAGATTCATCTTCAGCAGAACCGCTCTGATCTCGCC
TTGAAGGAAGTCCAGGCTGCAAAGCGCTGGGCGCAGGATTCCCTCTTGGT
TAACTTGGCTGAGTCGTGGGTGGGAATGAGAGTGATGGATCCTTTTTCTG
CAGAGGGTGGTATGTTTTGTCCATTGAGCAAACACACACATACAATCCCC
CCTTATGACCTCAAAGCGCTAACTTGCCTCATCCCCCCAATAACAGAGCT
AATCAACATCCACAATGCCTTTCACCAAGGCCAATACCAAGCCGTAATCG
AATTCGACACCTCCGCTCTATCCCCCGAGAACCAACTCCCTGCCCGTGTC
CTCCAGCTTCGCGCCAAGATCGCCCTAGGCCAATCAGATGAAGTTCTCGC
CGATGTCGAAGGCGAGGAAGAGACCCCCGATCTAGCGGCCGTGAAAGCGC
TGGCCCAGCAGTCGACTGGAGATGCCGAATCGGCGTTGAAGCTGGCTCAG
GACCTTGCGGAGAATTACCCCGACAATGCTACTGTACAGGTTCTGTGCGG
GACGTTGCTGCAGGCTCAGGGACAAAGTGAGGATGCGTTGGCTTTATTGA
CCAAGCATCAGGGGAACCTCGAGGCGCGCCTCGAACAGATCAACCCCGCG
CACCCCCTGCTCTCCGATCTTCAAGCAAAGAGTGAACTGTTCGATACCGC
GGCTGCGAAGTATGCTCCCAGAGTGTCGGCTTAAGGCGGCGAGAAATACC
AGGCTGCATTCTACGTCTACGAGGAATTGGCTTCCGCTCCTAGCAGCTCC
GCGCCCCTCTCTATCGTTGGTCAGGCCGTGGCAGAACTCCATCTCGGTCG
GTTGCCTGAGGCCGAGGCCGCCTTGACTGCAGCTCTGCAGCAGTATCCCG
ACGAGGCGGAACTGATTGCGAACACTGTTGTGCTGAACGTCTTGGCTGGC
AAGCCCTCGGAAGAGTTGGAGCATGTGGCCTTGATCGTCCAGATTCATCT
TCAGCAGAACCGCTCTGATCTCGCCTTGAAGGAAGTCCAGGCTGCAAAGC
GCTGGGCGCAGGATTCCCTCTTGGTTAACTTGGCTGAGTCGTGGGTGGGA
ATGAGAGTGATGGATCCTTTTTCTGCAGAGGGTGGTATGTTTTGTCCATT
GAGCAAACACACACATACAATCCCCCCTTATGACCTCAAAGCGCTAACTT
GCCTCATCCCCCCAATAACAGAGCTAATCAACATCCACAATGCCTTTCAC
CAAGGCCAATACCAAGCCGTAATCGAATTCGACACCTCCGCTCTATCCCC
CGAGAACCAACTCCCTGCCCGTGTCCTCCAGCTTCGCGCCAAGATCGCCC
TAGGCCAATCAGATGAAGTTCTCGCCGATGTCGAAGGCGAGGAAGAGACC
CCCGATCTAGCGGCCGTGAAAGCGCTGGCCCAGCAGTCGACTGGAGATGC
CGAATCGGCGTTGAAGCTGGCTCAGGACCTTGCGGAGAATTACCCCGACA
ATGCTACTGTACAGGTTCTGTGCGGGACGTTGCTGCAGGCTCAGGGACAA
AGTGAGGATGCGTTGGCTTTATTGACCAAGCATCAGGGGAACCTCGAGGC
GCGCCTCGAACAGATCAACCCCGCGCACCCCCTGCTCTCCGATCTTCAAG
CAAAGAGTGAACTGTTCGATACCGCGGCTGCGAAGTATGCTCCCAGAGTG
TCGGCTTAAGGCGGCGAGAAATACCAGGCTGCATTCTACGTCTACGAGGA
ATTGGCTTCCGCTCCTAGCAGCTCCGCGCCCCTCTCTATCGTTGGTCAGG
CCGTGGCAGAACTCCATCTCGGTCGGTTGCCTGAGGCCGAGGCCGCCTTG
ACTGCAGCTCTGCAGCAGTATCCCGACGAGGCGGAACTGATTGCGAACAC
TGTTGTGCTGAACGTCTTGGCTGGCAAGCCCTCGGAAGAGTTGGAGCATG
TGGCCTTGATCGTCCAGATTCATCTTCAGCAGAACCGCTCTGATCTCGCC
TTGAAGGAAGTCCAGGCTGCAAAGCGCTGGGCGCAGGATTCCCTCTTGGT
TAACTTGGCTGAGTCGTGGGTGGGAATGAGAGTGATGGATCCTTTTTCTG
CAGAGGGTGGTATGTTTTGTCCATTGAGCAAACACACACATACAATCCCC
CCTTATGACCTCAAAGCGCTAACTTGCCTCATCCCCCCAATAACAGAGCT
AATCAACATCCACAATGCCTTTCACCAAGGCCAATACCAAGCCGTAATCG
AATTCGACACCTCCGCTCTATCCCCCGAGAACCAACTCCCTGCCCGTGTC
CTCCAGCTTCGCGCCAAGATCGCCCTAGGCCAATCAGATGAAGTTCTCGC
CGATGTCGAAGGCGAGGAAGAGACCCCCGATCTAGCGGCCGTGAAAGCGC
TGGCCCAGCAGTCGACTGGAGATGCCGAATCGGCGTTGAAGCTGGCTCAG
GACCTTGCGGAGAATTACCCCGACAATGCTACTGTACAGGTTCTGTGCGG
GACGTTGCTGCAGGCTCAGGGACAAAGTGAGGATGCGTTGGCTTTATTGA
CCAAGCATCAGGGGAACCTCGAGGCGCGCCTCGAACAGATCAACCCCGCG
CACCCCCTGCTCTCCGATCTTCAAGCAAAGAGTGAACTGTTCGATACCGC
GGCTGCGAAGTATGCTCCCAGAGTGTCGGCTTAAGGCGGCGAGAAATACC
AGGCTGCATTCTACGTCTACGAGGAATTGGCTTCCGCTCCTAGCAGCTCC
GCGCCCCTCTCTATCGTTGGTCAGGCCGTGGCAGAACTCCATCTCGGTCG
GTTGCCTGAGGCCGAGGCCGCCTTGACTGCAGCTCTGCAGCAGTATCCCG
ACGAGGCGGAACTGATTGCGAACACTGTTGTGCTGAACGTCTTGGCTGGC
AAGCCCTCGGAAGAGTTGGAGCATGTGGCCTTGATCGTCCAGATTCATCT
TCAGCAGAACCGCTCTGATCTCGCCTTGAAGGAAGTCCAGGCTGCAAAGC
GCTGGGCGCAGGATTCCCTCTTGGTTAACTTGGCTGAGTCGTGGGTGGGA
ATGAGAGTGATGGATCCTTTTTCTGCAGAGGGTGGTATGTTTTGTCCATT
GAGCAAACACACACATACAATCCCCCCTTATGACCTCAAAGCGCTAACTT
GCCTCATCCCCCCAATAACAGAGCTAATCAACATCCACAATGCCTTTCAC
CAAGGCCAATACCAAGCCGTAATCGAATTCGACACCTCCGCTCTATCCCC
CGAGAACCAACTCCCTGCCCGTGTCCTCCAGCTTCGCGCCAAGATCGCCC
TAGGCCAATCAGATGAAGTTCTCGCCGATGTCGAAGGCGAGGAAGAGACC
CCCGATCTAGCGGCCGTGAAAGCGCTGGCCCAGCAGTCGACTGGAGATGC
CGAATCGGCGTTGAAGCTGGCTCAGGACCTTGCGGAGAATTACCCCGACA
ATGCTACTGTACAGGTTCTGTGCGGGACGTTGCTGCAGGCTCAGGGACAA
AGTGAGGATGCGTTGGCTTTATTGACCAAGCATCAGGGGAACCTCGAGGC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006890retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
Vocabulary: Molecular Function
TermDefinition
GO:0005198structural molecule activity
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_261810M747DRAFT_261810Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_261810-T1M747DRAFT_261810-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_261810-T1.cdsM747DRAFT_261810-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_261810-T1.utr3p1M747DRAFT_261810-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_261810-T1.exon4M747DRAFT_261810-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_261810-T1.exon3M747DRAFT_261810-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_261810-T1.exon2M747DRAFT_261810-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_261810-T1.exon1M747DRAFT_261810-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_261810-T1.utr5p1M747DRAFT_261810-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR006822
DBxrefInterPro:IPR011990
DBxrefPFAM:PF13174
DBxrefPFAM:PF13432
DBxrefPFAM:PF04733
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851920.1supercontigKZ851920.1:30273..31850 -
Powered by Drupal