You are here

Home

M747DRAFT_262921-T1, M747DRAFT_262921-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_262921-T1
Unique NameM747DRAFT_262921-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851924.1:127876..129178-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_262921-T1 ID=M747DRAFT_262921-T1|Name=M747DRAFT_262921-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1303bp|location=Sequence derived from alignment at KZ851924.1:127876..129178- (Aspergillus niger ATCC 13496)
CCCAAACACACATTCACAATGGGTTTCACTGATCTCGCTTCCGAAGCCGG
CCTCACCCGTATGTTCACATTTTCCCTCTCTTTTTTATCATTTCCCTTTC
CAATCTGCTCTCAGCAGTAACTAATGGTACCCCTCAGTTGCCAACAACTA
CCTGGCTACCAGGAGCTACATTGTTGGGTAAGGCACACCTTTAGGGATCC
TTCCCCCCCTCCCCCCTTAGCATTGGTACCTTGTGAAAGATTCTTCCTTG
TTTGCATGATGAAAAGAAATTGGTCCGTGTTTATGAGGCGGCTTAAGACC
CCGCTGCAAGATTAAACACAATTGCGAGCAATCGCGTTTCTGATTACTTG
GAAAAATTCTTCTTTGCTTTTTGTTTTCCGTCGTTCATGGATATAATCAC
TAGCGATGATGGTGGCATGAAGCTAACTGGAATATAGCGATGCTCCTTCC
CAGGCCGATGTCGTGACCTTCAAGGCCTTCTCCGGTGCCCCTGACGCCGA
GAAGTACCCCCACGCTGCTCGCTGGTACAAGAACATCGCCTCTTTCGAGG
CTGAGCACGCCACTCTCCCCGGCGATGCCTCCAAGCCCTACACTGCCTAC
GGCCCCGAGTCCACTGAGCTGCCCACCAACCCCAAGGCTGCCAACGACGA
CGACGACATGGACCTCTTCGGCTCCGACGAGGAGGAGGAGGACCCCGAGG
TCGTCAAGGAGCGTGAGGCTCGTCTTGCTGAGTACAGGAAGAAGAAGGAG
GCCAAGCCCAAGCCCGTTGCCAAGTCTCTCGTGACTCTTGAGGTTAAGCC
TTGGGGTATGTTCCATCTTCCATTTTTGGATCTTGTGTATGATTCTAACT
CGCTACAGATGATGAGACCGACATTGAGACTATGGAGGCCAACGTCCGTG
CCATTGAGATCGACGGTCTTGTCTGGGGTGCCTCCAAGTTTGTTGCCGTC
GGTTACGGTATCAAGAAGCTCCAGATCAACCTTGTCGTTGAGGACGAGAA
GGTCTCCCTTGATGAGCTCCAGGCTCAGATCGAGGAGGACGAGGACCACG
TCCAGTCCACCGATGTTGTAAGTAAAGATGAACACCTAGGGCGTCGTGAT
GATGCTAATGAAACCCCAACAGGCTGCCATGCAGAAGCTGTAAGCGGAAC
GTTTAATGATGAAGATAAATGGCGTGATGATGGATTATTTGATGCTATCC
CACGGAAATATACTGTCATGAACTTGAATAACCCAAGCCGATTGGGGACA
CCCCTCGGCATAACGAATACCAAAAACCAAAATAAATACCCAATTAATAC
ACT
back to top

Coding sequence (CDS) from alignment at KZ851924.1:127876..129178-

>M747DRAFT_262921-T1 ID=M747DRAFT_262921-T1|Name=M747DRAFT_262921-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3564bp|location=Sequence derived from alignment at KZ851924.1:127876..129178- (Aspergillus niger ATCC 13496)
ATGATGAGACCGACATTGAGACTATGGAGGCCAACGTCCGTGCCATTGAG
ATCGACGGTCTTGTCTGGGGTGCCTCCAAGTTTGTTGCCGTCGGTTACGG
TATCAAGAAGCTCCAGATCAACCTTGTCGTTGAGGACGAGAAGGTCTCCC
TTGATGAGCTCCAGGCTCAGATCGAGGAGGACGAGGACCACGTCCAGTCC
ACCGATGTTGTAAGTAAAGATGAACACCTAGGGCGTCGTGATGATGCTAA
TGAAACCCCAACAGGCTGCCATGCAGAAGCTGTAAGCGGAACGTTTAATG
ATGAAGATAAATGGCGTGATGATGGATTATTTGATGCTATCCCACGGAAA
TATACTGTCATGAACTTGAATAACCCAAGCCGATTGGGGACACCCCTCGG
CATAACGAATACCAAAAACCAAAATAAATACCCAATTAATACACGATGCT
CCTTCCCAGGCCGATGTCGTGACCTTCAAGGCCTTCTCCGGTGCCCCTGA
CGCCGAGAAGTACCCCCACGCTGCTCGCTGGTACAAGAACATCGCCTCTT
TCGAGGCTGAGCACGCCACTCTCCCCGGCGATGCCTCCAAGCCCTACACT
GCCTACGGCCCCGAGTCCACTGAGCTGCCCACCAACCCCAAGGCTGCCAA
CGACGACGACGACATGGACCTCTTCGGCTCCGACGAGGAGGAGGAGGACC
CCGAGGTCGTCAAGGAGCGTGAGGCTCGTCTTGCTGAGTACAGGAAGAAG
AAGGAGGCCAAGCCCAAGCCCGTTGCCAAGTCTCTCGTGACTCTTGAGGT
TAAGCCTTGGGTTGCCAACAACTACCTGGCTACCAGGAGCTACATTGTTG
GATGGGTTTCACTGATCTCGCTTCCGAAGCCGGCCTCACCCATGATGAGA
CCGACATTGAGACTATGGAGGCCAACGTCCGTGCCATTGAGATCGACGGT
CTTGTCTGGGGTGCCTCCAAGTTTGTTGCCGTCGGTTACGGTATCAAGAA
GCTCCAGATCAACCTTGTCGTTGAGGACGAGAAGGTCTCCCTTGATGAGC
TCCAGGCTCAGATCGAGGAGGACGAGGACCACGTCCAGTCCACCGATGTT
GTAAGTAAAGATGAACACCTAGGGCGTCGTGATGATGCTAATGAAACCCC
AACAGGCTGCCATGCAGAAGCTGTAAGCGGAACGTTTAATGATGAAGATA
AATGGCGTGATGATGGATTATTTGATGCTATCCCACGGAAATATACTGTC
ATGAACTTGAATAACCCAAGCCGATTGGGGACACCCCTCGGCATAACGAA
TACCAAAAACCAAAATAAATACCCAATTAATACACGATGCTCCTTCCCAG
GCCGATGTCGTGACCTTCAAGGCCTTCTCCGGTGCCCCTGACGCCGAGAA
GTACCCCCACGCTGCTCGCTGGTACAAGAACATCGCCTCTTTCGAGGCTG
AGCACGCCACTCTCCCCGGCGATGCCTCCAAGCCCTACACTGCCTACGGC
CCCGAGTCCACTGAGCTGCCCACCAACCCCAAGGCTGCCAACGACGACGA
CGACATGGACCTCTTCGGCTCCGACGAGGAGGAGGAGGACCCCGAGGTCG
TCAAGGAGCGTGAGGCTCGTCTTGCTGAGTACAGGAAGAAGAAGGAGGCC
AAGCCCAAGCCCGTTGCCAAGTCTCTCGTGACTCTTGAGGTTAAGCCTTG
GGTTGCCAACAACTACCTGGCTACCAGGAGCTACATTGTTGGATGGGTTT
CACTGATCTCGCTTCCGAAGCCGGCCTCACCCATGATGAGACCGACATTG
AGACTATGGAGGCCAACGTCCGTGCCATTGAGATCGACGGTCTTGTCTGG
GGTGCCTCCAAGTTTGTTGCCGTCGGTTACGGTATCAAGAAGCTCCAGAT
CAACCTTGTCGTTGAGGACGAGAAGGTCTCCCTTGATGAGCTCCAGGCTC
AGATCGAGGAGGACGAGGACCACGTCCAGTCCACCGATGTTGTAAGTAAA
GATGAACACCTAGGGCGTCGTGATGATGCTAATGAAACCCCAACAGGCTG
CCATGCAGAAGCTGTAAGCGGAACGTTTAATGATGAAGATAAATGGCGTG
ATGATGGATTATTTGATGCTATCCCACGGAAATATACTGTCATGAACTTG
AATAACCCAAGCCGATTGGGGACACCCCTCGGCATAACGAATACCAAAAA
CCAAAATAAATACCCAATTAATACACGATGCTCCTTCCCAGGCCGATGTC
GTGACCTTCAAGGCCTTCTCCGGTGCCCCTGACGCCGAGAAGTACCCCCA
CGCTGCTCGCTGGTACAAGAACATCGCCTCTTTCGAGGCTGAGCACGCCA
CTCTCCCCGGCGATGCCTCCAAGCCCTACACTGCCTACGGCCCCGAGTCC
ACTGAGCTGCCCACCAACCCCAAGGCTGCCAACGACGACGACGACATGGA
CCTCTTCGGCTCCGACGAGGAGGAGGAGGACCCCGAGGTCGTCAAGGAGC
GTGAGGCTCGTCTTGCTGAGTACAGGAAGAAGAAGGAGGCCAAGCCCAAG
CCCGTTGCCAAGTCTCTCGTGACTCTTGAGGTTAAGCCTTGGGTTGCCAA
CAACTACCTGGCTACCAGGAGCTACATTGTTGGATGGGTTTCACTGATCT
CGCTTCCGAAGCCGGCCTCACCCATGATGAGACCGACATTGAGACTATGG
AGGCCAACGTCCGTGCCATTGAGATCGACGGTCTTGTCTGGGGTGCCTCC
AAGTTTGTTGCCGTCGGTTACGGTATCAAGAAGCTCCAGATCAACCTTGT
CGTTGAGGACGAGAAGGTCTCCCTTGATGAGCTCCAGGCTCAGATCGAGG
AGGACGAGGACCACGTCCAGTCCACCGATGTTGTAAGTAAAGATGAACAC
CTAGGGCGTCGTGATGATGCTAATGAAACCCCAACAGGCTGCCATGCAGA
AGCTGTAAGCGGAACGTTTAATGATGAAGATAAATGGCGTGATGATGGAT
TATTTGATGCTATCCCACGGAAATATACTGTCATGAACTTGAATAACCCA
AGCCGATTGGGGACACCCCTCGGCATAACGAATACCAAAAACCAAAATAA
ATACCCAATTAATACACGATGCTCCTTCCCAGGCCGATGTCGTGACCTTC
AAGGCCTTCTCCGGTGCCCCTGACGCCGAGAAGTACCCCCACGCTGCTCG
CTGGTACAAGAACATCGCCTCTTTCGAGGCTGAGCACGCCACTCTCCCCG
GCGATGCCTCCAAGCCCTACACTGCCTACGGCCCCGAGTCCACTGAGCTG
CCCACCAACCCCAAGGCTGCCAACGACGACGACGACATGGACCTCTTCGG
CTCCGACGAGGAGGAGGAGGACCCCGAGGTCGTCAAGGAGCGTGAGGCTC
GTCTTGCTGAGTACAGGAAGAAGAAGGAGGCCAAGCCCAAGCCCGTTGCC
AAGTCTCTCGTGACTCTTGAGGTTAAGCCTTGGGTTGCCAACAACTACCT
GGCTACCAGGAGCTACATTGTTGGATGGGTTTCACTGATCTCGCTTCCGA
AGCCGGCCTCACCC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005853eukaryotic translation elongation factor 1 complex
Vocabulary: Biological Process
TermDefinition
GO:0006414translational elongation
Vocabulary: Molecular Function
TermDefinition
GO:0003746translation elongation factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_262921M747DRAFT_262921Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_262921-T1M747DRAFT_262921-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_262921-T1.cdsM747DRAFT_262921-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_262921-T1.utr3p1M747DRAFT_262921-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_262921-T1.exon4M747DRAFT_262921-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_262921-T1.exon3M747DRAFT_262921-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_262921-T1.exon2M747DRAFT_262921-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_262921-T1.exon1M747DRAFT_262921-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_262921-T1.utr5p1M747DRAFT_262921-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092644ZU
DBxrefInterPro:IPR036219
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR001326
DBxrefInterPro:IPR014717
DBxrefInterPro:IPR018940
DBxrefInterPro:IPR014038
DBxrefPFAM:PF00736
DBxrefPFAM:PF10587
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851924.1supercontigKZ851924.1:127876..129178 -
Powered by Drupal