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M747DRAFT_265188-T1, M747DRAFT_265188-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_265188-T1
Unique NameM747DRAFT_265188-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851932.1:342041..343016+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_265188-T1 ID=M747DRAFT_265188-T1|Name=M747DRAFT_265188-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=976bp|location=Sequence derived from alignment at KZ851932.1:342041..343016+ (Aspergillus niger ATCC 13496)
CTTACAAAGGCTGCATCGCAATCGCGTCTGGAGATCTTCCTGCGCTTTCC
TGCTTGTTGATAACCTATTCAGTTTATCGCATTTGCTGCAGTGAACTGCA
AGCATTTTGCAAGATGCGTCAACTCACCGAAGGTAGGTACAACCATCTCC
GTCTGTTGTGATTCTCGCGCATGGATTCTTATTTCGCTTCTGTTTAGAGG
AAACCCGGACTTTGTTCGAAAAGTTGGCCAACTACACTGGAAGGAGTCTT
AACAACCTGATCGCACCTCCTTCTGGCTCCGAAGATGCCAACGACCGCTA
TGTTTTCCGTCTTCACGGCAGCAGAGTATACTACCTGAGACTTTCTCTGG
CGAACCTCGCAACCAGCATTCCTCGCGCCAACCTCCTCACCCTCGGAACC
TGCATCGGAAAGTTCACCAAGACCGGAAAGTTCAGAATCCAGCTTACGGC
TTTGGATGTCCTCGCTCCTCATGCGCGCTACAAGGTGTGGATCAAGCAGA
ACGGTGTGATGCCGTTCCTCTATGGCTCCAACGTGGCCAAGGCCCACGTC
GGAAGATTCAGCGAGGACTGCCCGGAGAATGCCGGTGTAATCGTTATGGA
TATGAATGATACGCCATTGGTAAGAAGACTTCGGCTGGATTGAGATAATC
AGAGGCTGATATACGTTAGGGATTCGGTGTGACTGCCCGGTCGAGTGCTG
AAACCCGGAGACTGGAGCCCACAGCCAACGTGGTGTTCCGTCAGGCAGAT
ATTGGAGAGTACCTGAGAGAGGTAGGTTGACCAAATGTCACATCCACGGT
ATCAATTTGCTGACATACCCCTAGGAAGATACTCTGTTTACGACCTAAGC
CAAAGCCTTGCATACGCGGGATCGAACATGGGAGATATATACTAGATACC
TGGGCATTCTCGCAGGAGTTCTGGAGTCGTCTGTCTGTACATTTAGAAAA
GTGTTTCTCAATTCACCTTATCCATC
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Coding sequence (CDS) from alignment at KZ851932.1:342041..343016+

>M747DRAFT_265188-T1 ID=M747DRAFT_265188-T1|Name=M747DRAFT_265188-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2268bp|location=Sequence derived from alignment at KZ851932.1:342041..343016+ (Aspergillus niger ATCC 13496)
ATGCGTCAACTCACCGAAGAGGAAACCCGGACTTTGTTCGAAAAGTTGGC
CAACTACACTGGAAGGAGTCTTAACAACCTGATCGCACCTCCTTCTGGCT
CCGAAGATGCCAACGACCGCTATGTTTTCCGTCTTCACGGCAGCAGAGTA
TACTACCTGAGACTTTCTCTGGCGAACCTCGCAACCAGCATTCCTCGCGC
CAACCTCCTCACCCTCGGAACCTGCATCGGAAAGTTCACCAAGACCGGAA
AGTTCAGAATCCAGCTTACGGCTTTGGATGTCCTCGCTCCTCATGCGCGC
TACAAGGTGTGGATCAAGCAGAACGGTGTGATGCCGTTCCTCTATGGCTC
CAACGTGGCCAAGGCCCACGTCGGAAGATTCAGCGAGGACTGCCCGGAGA
ATGCCGGTGTAATCGTTATGGATATGAATGATACGCCATTGGGATTCGGT
GTGACTGCCCGGTCGAGTGCTGAAACCCGGAGACTGGAGCCCACAGCCAA
CGTGGTGTTCCGTCAGGCAGATATTGGAGAGTACCTGAGAGAGGAAGATA
CTCTGTTTACGACCTAAATGCGTCAACTCACCGAAGAGGAAACCCGGACT
TTGTTCGAAAAGTTGGCCAACTACACTGGAAGGAGTCTTAACAACCTGAT
CGCACCTCCTTCTGGCTCCGAAGATGCCAACGACCGCTATGTTTTCCGTC
TTCACGGCAGCAGAGTATACTACCTGAGACTTTCTCTGGCGAACCTCGCA
ACCAGCATTCCTCGCGCCAACCTCCTCACCCTCGGAACCTGCATCGGAAA
GTTCACCAAGACCGGAAAGTTCAGAATCCAGCTTACGGCTTTGGATGTCC
TCGCTCCTCATGCGCGCTACAAGGTGTGGATCAAGCAGAACGGTGTGATG
CCGTTCCTCTATGGCTCCAACGTGGCCAAGGCCCACGTCGGAAGATTCAG
CGAGGACTGCCCGGAGAATGCCGGTGTAATCGTTATGGATATGAATGATA
CGCCATTGGGATTCGGTGTGACTGCCCGGTCGAGTGCTGAAACCCGGAGA
CTGGAGCCCACAGCCAACGTGGTGTTCCGTCAGGCAGATATTGGAGAGTA
CCTGAGAGAGGAAGATACTCTGTTTACGACCTAAATGCGTCAACTCACCG
AAGAGGAAACCCGGACTTTGTTCGAAAAGTTGGCCAACTACACTGGAAGG
AGTCTTAACAACCTGATCGCACCTCCTTCTGGCTCCGAAGATGCCAACGA
CCGCTATGTTTTCCGTCTTCACGGCAGCAGAGTATACTACCTGAGACTTT
CTCTGGCGAACCTCGCAACCAGCATTCCTCGCGCCAACCTCCTCACCCTC
GGAACCTGCATCGGAAAGTTCACCAAGACCGGAAAGTTCAGAATCCAGCT
TACGGCTTTGGATGTCCTCGCTCCTCATGCGCGCTACAAGGTGTGGATCA
AGCAGAACGGTGTGATGCCGTTCCTCTATGGCTCCAACGTGGCCAAGGCC
CACGTCGGAAGATTCAGCGAGGACTGCCCGGAGAATGCCGGTGTAATCGT
TATGGATATGAATGATACGCCATTGGGATTCGGTGTGACTGCCCGGTCGA
GTGCTGAAACCCGGAGACTGGAGCCCACAGCCAACGTGGTGTTCCGTCAG
GCAGATATTGGAGAGTACCTGAGAGAGGAAGATACTCTGTTTACGACCTA
AATGCGTCAACTCACCGAAGAGGAAACCCGGACTTTGTTCGAAAAGTTGG
CCAACTACACTGGAAGGAGTCTTAACAACCTGATCGCACCTCCTTCTGGC
TCCGAAGATGCCAACGACCGCTATGTTTTCCGTCTTCACGGCAGCAGAGT
ATACTACCTGAGACTTTCTCTGGCGAACCTCGCAACCAGCATTCCTCGCG
CCAACCTCCTCACCCTCGGAACCTGCATCGGAAAGTTCACCAAGACCGGA
AAGTTCAGAATCCAGCTTACGGCTTTGGATGTCCTCGCTCCTCATGCGCG
CTACAAGGTGTGGATCAAGCAGAACGGTGTGATGCCGTTCCTCTATGGCT
CCAACGTGGCCAAGGCCCACGTCGGAAGATTCAGCGAGGACTGCCCGGAG
AATGCCGGTGTAATCGTTATGGATATGAATGATACGCCATTGGGATTCGG
TGTGACTGCCCGGTCGAGTGCTGAAACCCGGAGACTGGAGCCCACAGCCA
ACGTGGTGTTCCGTCAGGCAGATATTGGAGAGTACCTGAGAGAGGAAGAT
ACTCTGTTTACGACCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0042255ribosome assembly
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NIP7M747DRAFT_265188Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_265188-T1M747DRAFT_265188-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_265188-T1.utr5p1M747DRAFT_265188-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_265188-T1.exon1M747DRAFT_265188-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_265188-T1.exon2M747DRAFT_265188-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_265188-T1.exon3M747DRAFT_265188-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_265188-T1.exon4M747DRAFT_265188-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_265188-T1.cdsM747DRAFT_265188-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_265188-T1.utr3p1M747DRAFT_265188-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264PD5
DBxrefInterPro:IPR015947
DBxrefInterPro:IPR016686
DBxrefInterPro:IPR040598
DBxrefInterPro:IPR005155
DBxrefInterPro:IPR036974
DBxrefInterPro:IPR002478
DBxrefPFAM:PF17833
DBxrefPFAM:PF03657
Productribosome biosynthesis protein nip7
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851932.1supercontigKZ851932.1:342041..343016 +
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