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M747DRAFT_268649-T1, M747DRAFT_268649-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_268649-T1
Unique NameM747DRAFT_268649-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851951.1:166090..167676+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_268649-T1 ID=M747DRAFT_268649-T1|Name=M747DRAFT_268649-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1587bp|location=Sequence derived from alignment at KZ851951.1:166090..167676+ (Aspergillus niger ATCC 13496)
AACAGCTTCCCTCTTCATCGTCATCGCTCCTCCTCCTCCTCCTTCATCTC
CCATCTTCATCCCCTTGCTTATCCCGCAACAATCCCTCCCACACGCTTCT
GAAAGACCCTTCATCCTCCCCTTCCAGTCCTATCTCCACCGCTGACAGCT
CGTCTCGCGTTCCTTCTGTCTCCGCCATGCCTGCCACCACGGCGGACGCA
CTTTCCCTCGTTCAGCGCACCGTCACGGTCGCTCCGCTAGTTCTTCTCTC
CGTCGCAGATCACTACGGCCGCTCGGCCAAGGGTACCCGGAAACGTGTGG
TTGGTGTGCTGCTGGGTGAGAACTCGGGCCAGAATGTCCGGGTATCGAAC
AGCTTTGCGGGTGCGTCATTGACCTTCTATTTACCTTCGGTATCTCTTTC
AGTGTCCACGTGCTGACAGTTCCTTCTCCCAGTACCCTTCGAGGAAGATG
AGAAGGACCCCTCCGTTTGGTTCCTAGATCACAACTTTGTCGAGTCGATG
AGGGACATGTTCAAGAAGATCAATGCTCGTGAGAAGCTGGTTGGATGGTA
TCACTCGGGCCCGAAGCTGCGGGCCTCGGATTTGGAAATCAACGAACTCT
TCAAGCGCTACACACCGAACCCTCTGCTGGTGATTGTGGATGTCCAACCG
AAGGAAGTCGGCGTTCCTACGGATGCTTACTTTGCTGTGGATGAGATCAA
GGATGTGAGTAACTATGCGCGCCGTCGTACCGGACCTCGTTAAAGGACAT
ATGGACTAATCATCACAATGCTGTAACAGGATGGCACCACAACATCAAAG
ACCTTCGTCCACACCCCGTCTATAATCGAAGCTGAGGAAGCTGAGGAAAT
TGGAGTGGAGCACCTTCTCCGGGATATCAGGGATGTCGCTGTCGGAACCC
TCTCCACCCGCATAACGTCGCAGCTTCAGTCGCTGCAGGGTCTGCACCTG
CGTTTGCGCGACATCGGCCAATACCTGCAGAAGGTTCTTGACCACGAACT
CCCCGTCAACCACGCCATTTTGGGCAACCTCCAGGACGTCTTCAACCTCC
TCCCCAACCTTTCCACACCAGCCGCCACGCCGCGCATCAGCGGCGCGCCC
GAACAGCCGACGGAGAACAGCGAGCTCGCACGGGCCATGAGCATCAAGAC
CAACGATCAATTAATGGCGATCTACTTGAGCAGCTTGATCCGCGCCATCA
CCGCATTCCACGACTTGATCGAGAACAAGATCCAGAACCGGCAGCAACAA
GAAGAGAACGAGCTGAAGAGGGAACAGGAGGCCAACGCGGCCAAGACCGA
GAAGGAGGCCGCGAAGAAGGCCAACAGTGCCGCCAATGGAGAGCAGAAGG
AGGGTCAAGACAAGGAGAAGGCCAAGAAGAGCCAGAAGGAGTAGACGGGT
CAGGGACTCTATGCGATACGATCATCTAGAACAATGCAGTCCATCGAATG
TATATTACGGTAATCTCTACGCGGCTGATTGCGACCACGGGGCATCTGCT
TGTTATAGGCCAGCAACGGTGCTGCTGTATGTGTGTATTGGTAAGATCTA
TCCTCAAGAGCAGCACTTGCGTGAGGTATTGTCGAGG
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Coding sequence (CDS) from alignment at KZ851951.1:166090..167676+

>M747DRAFT_268649-T1 ID=M747DRAFT_268649-T1|Name=M747DRAFT_268649-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3213bp|location=Sequence derived from alignment at KZ851951.1:166090..167676+ (Aspergillus niger ATCC 13496)
ATGCCTGCCACCACGGCGGACGCACTTTCCCTCGTTCAGCGCACCGTCAC
GGTCGCTCCGCTAGTTCTTCTCTCCGTCGCAGATCACTACGGCCGCTCGG
CCAAGGGTACCCGGAAACGTGTGGTTGGTGTGCTGCTGGGTGAGAACTCG
GGCCAGAATGTCCGGGTATCGAACAGCTTTGCGGTACCCTTCGAGGAAGA
TGAGAAGGACCCCTCCGTTTGGTTCCTAGATCACAACTTTGTCGAGTCGA
TGAGGGACATGTTCAAGAAGATCAATGCTCGTGAGAAGCTGGTTGGATGG
TATCACTCGGGCCCGAAGCTGCGGGCCTCGGATTTGGAAATCAACGAACT
CTTCAAGCGCTACACACCGAACCCTCTGCTGGTGATTGTGGATGTCCAAC
CGAAGGAAGTCGGCGTTCCTACGGATGCTTACTTTGCTGTGGATGAGATC
AAGGATGATGGCACCACAACATCAAAGACCTTCGTCCACACCCCGTCTAT
AATCGAAGCTGAGGAAGCTGAGGAAATTGGAGTGGAGCACCTTCTCCGGG
ATATCAGGGATGTCGCTGTCGGAACCCTCTCCACCCGCATAACGTCGCAG
CTTCAGTCGCTGCAGGGTCTGCACCTGCGTTTGCGCGACATCGGCCAATA
CCTGCAGAAGGTTCTTGACCACGAACTCCCCGTCAACCACGCCATTTTGG
GCAACCTCCAGGACGTCTTCAACCTCCTCCCCAACCTTTCCACACCAGCC
GCCACGCCGCGCATCAGCGGCGCGCCCGAACAGCCGACGGAGAACAGCGA
GCTCGCACGGGCCATGAGCATCAAGACCAACGATCAATTAATGGCGATCT
ACTTGAGCAGCTTGATCCGCGCCATCACCGCATTCCACGACTTGATCGAG
AACAAGATCCAGAACCGGCAGCAACAAGAAGAGAACGAGCTGAAGAGGGA
ACAGGAGGCCAACGCGGCCAAGACCGAGAAGGAGGCCGCGAAGAAGGCCA
ACAGTGCCGCCAATGGAGAGCAGAAGGAGGGTCAAGACAAGGAGAAGGCC
AAGAAGAGCCAGAAGGAGTAGATGCCTGCCACCACGGCGGACGCACTTTC
CCTCGTTCAGCGCACCGTCACGGTCGCTCCGCTAGTTCTTCTCTCCGTCG
CAGATCACTACGGCCGCTCGGCCAAGGGTACCCGGAAACGTGTGGTTGGT
GTGCTGCTGGGTGAGAACTCGGGCCAGAATGTCCGGGTATCGAACAGCTT
TGCGGTACCCTTCGAGGAAGATGAGAAGGACCCCTCCGTTTGGTTCCTAG
ATCACAACTTTGTCGAGTCGATGAGGGACATGTTCAAGAAGATCAATGCT
CGTGAGAAGCTGGTTGGATGGTATCACTCGGGCCCGAAGCTGCGGGCCTC
GGATTTGGAAATCAACGAACTCTTCAAGCGCTACACACCGAACCCTCTGC
TGGTGATTGTGGATGTCCAACCGAAGGAAGTCGGCGTTCCTACGGATGCT
TACTTTGCTGTGGATGAGATCAAGGATGATGGCACCACAACATCAAAGAC
CTTCGTCCACACCCCGTCTATAATCGAAGCTGAGGAAGCTGAGGAAATTG
GAGTGGAGCACCTTCTCCGGGATATCAGGGATGTCGCTGTCGGAACCCTC
TCCACCCGCATAACGTCGCAGCTTCAGTCGCTGCAGGGTCTGCACCTGCG
TTTGCGCGACATCGGCCAATACCTGCAGAAGGTTCTTGACCACGAACTCC
CCGTCAACCACGCCATTTTGGGCAACCTCCAGGACGTCTTCAACCTCCTC
CCCAACCTTTCCACACCAGCCGCCACGCCGCGCATCAGCGGCGCGCCCGA
ACAGCCGACGGAGAACAGCGAGCTCGCACGGGCCATGAGCATCAAGACCA
ACGATCAATTAATGGCGATCTACTTGAGCAGCTTGATCCGCGCCATCACC
GCATTCCACGACTTGATCGAGAACAAGATCCAGAACCGGCAGCAACAAGA
AGAGAACGAGCTGAAGAGGGAACAGGAGGCCAACGCGGCCAAGACCGAGA
AGGAGGCCGCGAAGAAGGCCAACAGTGCCGCCAATGGAGAGCAGAAGGAG
GGTCAAGACAAGGAGAAGGCCAAGAAGAGCCAGAAGGAGTAGATGCCTGC
CACCACGGCGGACGCACTTTCCCTCGTTCAGCGCACCGTCACGGTCGCTC
CGCTAGTTCTTCTCTCCGTCGCAGATCACTACGGCCGCTCGGCCAAGGGT
ACCCGGAAACGTGTGGTTGGTGTGCTGCTGGGTGAGAACTCGGGCCAGAA
TGTCCGGGTATCGAACAGCTTTGCGGTACCCTTCGAGGAAGATGAGAAGG
ACCCCTCCGTTTGGTTCCTAGATCACAACTTTGTCGAGTCGATGAGGGAC
ATGTTCAAGAAGATCAATGCTCGTGAGAAGCTGGTTGGATGGTATCACTC
GGGCCCGAAGCTGCGGGCCTCGGATTTGGAAATCAACGAACTCTTCAAGC
GCTACACACCGAACCCTCTGCTGGTGATTGTGGATGTCCAACCGAAGGAA
GTCGGCGTTCCTACGGATGCTTACTTTGCTGTGGATGAGATCAAGGATGA
TGGCACCACAACATCAAAGACCTTCGTCCACACCCCGTCTATAATCGAAG
CTGAGGAAGCTGAGGAAATTGGAGTGGAGCACCTTCTCCGGGATATCAGG
GATGTCGCTGTCGGAACCCTCTCCACCCGCATAACGTCGCAGCTTCAGTC
GCTGCAGGGTCTGCACCTGCGTTTGCGCGACATCGGCCAATACCTGCAGA
AGGTTCTTGACCACGAACTCCCCGTCAACCACGCCATTTTGGGCAACCTC
CAGGACGTCTTCAACCTCCTCCCCAACCTTTCCACACCAGCCGCCACGCC
GCGCATCAGCGGCGCGCCCGAACAGCCGACGGAGAACAGCGAGCTCGCAC
GGGCCATGAGCATCAAGACCAACGATCAATTAATGGCGATCTACTTGAGC
AGCTTGATCCGCGCCATCACCGCATTCCACGACTTGATCGAGAACAAGAT
CCAGAACCGGCAGCAACAAGAAGAGAACGAGCTGAAGAGGGAACAGGAGG
CCAACGCGGCCAAGACCGAGAAGGAGGCCGCGAAGAAGGCCAACAGTGCC
GCCAATGGAGAGCAGAAGGAGGGTCAAGACAAGGAGAAGGCCAAGAAGAG
CCAGAAGGAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005838proteasome regulatory particle
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPN8M747DRAFT_268649Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_268649-T1M747DRAFT_268649-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_268649-T1.utr5p1M747DRAFT_268649-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_268649-T1.exon1M747DRAFT_268649-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_268649-T1.exon2M747DRAFT_268649-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_268649-T1.exon3M747DRAFT_268649-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_268649-T1.cdsM747DRAFT_268649-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_268649-T1.utr3p1M747DRAFT_268649-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09263KRO
NoteMEROPS:MER0030134
DBxrefInterPro:IPR033858
DBxrefInterPro:IPR037518
DBxrefInterPro:IPR024969
DBxrefInterPro:IPR000555
DBxrefPFAM:PF13012
DBxrefPFAM:PF01398
Productproteasome regulatory particle subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851951.1supercontigKZ851951.1:166090..167676 +
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