You are here

Home

M747DRAFT_269521-T1, M747DRAFT_269521-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_269521-T1
Unique NameM747DRAFT_269521-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851958.1:90840..92004-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_269521-T1 ID=M747DRAFT_269521-T1|Name=M747DRAFT_269521-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1165bp|location=Sequence derived from alignment at KZ851958.1:90840..92004- (Aspergillus niger ATCC 13496)
ATGGCGGCACTGCCGGACGTTGCCTCCATTCCCCTTCCTCTGGTGGCAAC
CCTGGGAATTGCCCCTCTAGTTTTCTATCTCGTCCTTGATAGATTTGGCC
CTTTGTGGCCAAACTCCAAAACTTTCTTGATTGGAAAGAAGAAGCCGGAG
ACCGTGACATCCTTTGAGTGCCCATATGCCTACATCCGGCAGATCTATGG
GAAGCATCACTGGAATCCATTCGTGCAGAAGCTGTCTCCAAGGCTTAAGG
ATGAGGATCCAGCCAAATATAAGATGGTTCTAGAGATAATGGATGCAATT
CACCTGTGTTTGATGCTAGTTGACGATGTATGTATACCGTGGGCCTATAT
AAATACACTCTAACATCAAGCAGATAACCGACAATAGCGACTACCGAAAA
GGCAAGCCAGCAGCTCACCGGATATATGGCCCTTCAGAGACAGCAAACCG
CGCTTACTACCGAGTCACCCAAATTCTCAATGAGACTGTGCAGCGGTTCC
CCAAGTTAGCCAAGTTCCTGCTACAAAATCTGGAAGAGATCCTCGAGGGC
CAAGACCTGTCACTGATCTGGCGACGAGATGGGCTGGGTAGCCTTTCGAC
CGTTCCCGAGGAGCGAGTTGCAGCCTACCGCAAAATGGCGTCATTGAAAA
CAGGGGCGCTATTCCGGCTGCTGGGGCAATTGGTGATGGAGGACCAATCG
ATGGACGGGACGATGACTACTCTTGCGTATGGCTCGCTTGGTTTATTGCA
TATCACACCAAGTCTAGCTGAAGCTGAAGCTGACCTTGAGATAGGTGGTG
CTCTCAGCTGCAGAACGATTGCAAAAATGTCTACTCATCCGAATATGCTA
AGGCCAAGGGAGCACTTGCAGAAGATCTGCGTAATCGAGAGCTCTCATAT
CCAATCATTCTCGCGCTGGAAGCCCCCGAAGGGCATTGGGTCGCCAGTGC
ATTGGAGACCAGCTCACCGCGCAATATCCGCAAGGCACTTGCCGTGATTC
AGAGCGAGAGAGTGCGCAATGCTTGTTTCAGGGAGCTCAAGTCGGCGAGT
GCTTCGGTCCAGGACTGGTTGGCTATCTGGGGACGGAACGAGAAGATGAA
TCTAAAGAGCCAGCAGACATAGCTTTTCAGTGTTTTGAGGCATACAGTTT
CTCTTATGGTTTGAG
back to top

Coding sequence (CDS) from alignment at KZ851958.1:90840..92004-

>M747DRAFT_269521-T1 ID=M747DRAFT_269521-T1|Name=M747DRAFT_269521-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3024bp|location=Sequence derived from alignment at KZ851958.1:90840..92004- (Aspergillus niger ATCC 13496)
GTGGTGCTCTCAGCTGCAGAACGATTGCAAAAATGTCTACTCATCCGAAT
ATGCTAAGGCCAAGGGAGCACTTGCAGAAGATCTGCGTAATCGAGAGCTC
TCATATCCAATCATTCTCGCGCTGGAAGCCCCCGAAGGGCATTGGGTCGC
CAGTGCATTGGAGACCAGCTCACCGCGCAATATCCGCAAGGCACTTGCCG
TGATTCAGAGCGAGAGAGTGCGCAATGCTTGTTTCAGGGAGCTCAAGTCG
GCGAGTGCTTCGGTCCAGGACTGGTTGGCTATCTGGGGACGGAACGAGAA
GATGAATCTAAAGAGCCAGCAGACATAGATAACCGACAATAGCGACTACC
GAAAAGGCAAGCCAGCAGCTCACCGGATATATGGCCCTTCAGAGACAGCA
AACCGCGCTTACTACCGAGTCACCCAAATTCTCAATGAGACTGTGCAGCG
GTTCCCCAAGTTAGCCAAGTTCCTGCTACAAAATCTGGAAGAGATCCTCG
AGGGCCAAGACCTGTCACTGATCTGGCGACGAGATGGGCTGGGTAGCCTT
TCGACCGTTCCCGAGGAGCGAGTTGCAGCCTACCGCAAAATGGCGTCATT
GAAAACAGGGGCGCTATTCCGGCTGCTGGGGCAATTGGTGATGGAGGACC
AATCGATGGACGGGACGATGACTACTCTTGCATGGCGGCACTGCCGGACG
TTGCCTCCATTCCCCTTCCTCTGGTGGCAACCCTGGGAATTGCCCCTCTA
GTTTTCTATCTCGTCCTTGATAGATTTGGCCCTTTGTGGCCAAACTCCAA
AACTTTCTTGATTGGAAAGAAGAAGCCGGAGACCGTGACATCCTTTGAGT
GCCCATATGCCTACATCCGGCAGATCTATGGGAAGCATCACTGGAATCCA
TTCGTGCAGAAGCTGTCTCCAAGGCTTAAGGATGAGGATCCAGCCAAATA
TAAGATGGTTCTAGAGATAATGGATGCAATTCACCTGTGTTTGATGCTAG
TTGACGATGTGGTGCTCTCAGCTGCAGAACGATTGCAAAAATGTCTACTC
ATCCGAATATGCTAAGGCCAAGGGAGCACTTGCAGAAGATCTGCGTAATC
GAGAGCTCTCATATCCAATCATTCTCGCGCTGGAAGCCCCCGAAGGGCAT
TGGGTCGCCAGTGCATTGGAGACCAGCTCACCGCGCAATATCCGCAAGGC
ACTTGCCGTGATTCAGAGCGAGAGAGTGCGCAATGCTTGTTTCAGGGAGC
TCAAGTCGGCGAGTGCTTCGGTCCAGGACTGGTTGGCTATCTGGGGACGG
AACGAGAAGATGAATCTAAAGAGCCAGCAGACATAGATAACCGACAATAG
CGACTACCGAAAAGGCAAGCCAGCAGCTCACCGGATATATGGCCCTTCAG
AGACAGCAAACCGCGCTTACTACCGAGTCACCCAAATTCTCAATGAGACT
GTGCAGCGGTTCCCCAAGTTAGCCAAGTTCCTGCTACAAAATCTGGAAGA
GATCCTCGAGGGCCAAGACCTGTCACTGATCTGGCGACGAGATGGGCTGG
GTAGCCTTTCGACCGTTCCCGAGGAGCGAGTTGCAGCCTACCGCAAAATG
GCGTCATTGAAAACAGGGGCGCTATTCCGGCTGCTGGGGCAATTGGTGAT
GGAGGACCAATCGATGGACGGGACGATGACTACTCTTGCATGGCGGCACT
GCCGGACGTTGCCTCCATTCCCCTTCCTCTGGTGGCAACCCTGGGAATTG
CCCCTCTAGTTTTCTATCTCGTCCTTGATAGATTTGGCCCTTTGTGGCCA
AACTCCAAAACTTTCTTGATTGGAAAGAAGAAGCCGGAGACCGTGACATC
CTTTGAGTGCCCATATGCCTACATCCGGCAGATCTATGGGAAGCATCACT
GGAATCCATTCGTGCAGAAGCTGTCTCCAAGGCTTAAGGATGAGGATCCA
GCCAAATATAAGATGGTTCTAGAGATAATGGATGCAATTCACCTGTGTTT
GATGCTAGTTGACGATGTGGTGCTCTCAGCTGCAGAACGATTGCAAAAAT
GTCTACTCATCCGAATATGCTAAGGCCAAGGGAGCACTTGCAGAAGATCT
GCGTAATCGAGAGCTCTCATATCCAATCATTCTCGCGCTGGAAGCCCCCG
AAGGGCATTGGGTCGCCAGTGCATTGGAGACCAGCTCACCGCGCAATATC
CGCAAGGCACTTGCCGTGATTCAGAGCGAGAGAGTGCGCAATGCTTGTTT
CAGGGAGCTCAAGTCGGCGAGTGCTTCGGTCCAGGACTGGTTGGCTATCT
GGGGACGGAACGAGAAGATGAATCTAAAGAGCCAGCAGACATAGATAACC
GACAATAGCGACTACCGAAAAGGCAAGCCAGCAGCTCACCGGATATATGG
CCCTTCAGAGACAGCAAACCGCGCTTACTACCGAGTCACCCAAATTCTCA
ATGAGACTGTGCAGCGGTTCCCCAAGTTAGCCAAGTTCCTGCTACAAAAT
CTGGAAGAGATCCTCGAGGGCCAAGACCTGTCACTGATCTGGCGACGAGA
TGGGCTGGGTAGCCTTTCGACCGTTCCCGAGGAGCGAGTTGCAGCCTACC
GCAAAATGGCGTCATTGAAAACAGGGGCGCTATTCCGGCTGCTGGGGCAA
TTGGTGATGGAGGACCAATCGATGGACGGGACGATGACTACTCTTGCATG
GCGGCACTGCCGGACGTTGCCTCCATTCCCCTTCCTCTGGTGGCAACCCT
GGGAATTGCCCCTCTAGTTTTCTATCTCGTCCTTGATAGATTTGGCCCTT
TGTGGCCAAACTCCAAAACTTTCTTGATTGGAAAGAAGAAGCCGGAGACC
GTGACATCCTTTGAGTGCCCATATGCCTACATCCGGCAGATCTATGGGAA
GCATCACTGGAATCCATTCGTGCAGAAGCTGTCTCCAAGGCTTAAGGATG
AGGATCCAGCCAAATATAAGATGGTTCTAGAGATAATGGATGCAATTCAC
CTGTGTTTGATGCTAGTTGACGAT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_269521M747DRAFT_269521Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_269521-T1M747DRAFT_269521-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_269521-T1.cdsM747DRAFT_269521-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_269521-T1.utr3p1M747DRAFT_269521-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_269521-T1.exon3M747DRAFT_269521-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_269521-T1.exon2M747DRAFT_269521-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_269521-T1.exon1M747DRAFT_269521-T1.exon1Aspergillus niger ATCC 13496exon


Properties
Property NameValue
NoteantiSMASH:Cluster_8519581.1
NoteSMCOG1182:Polyprenyl synthetase
DBxrefInterPro:IPR008949
DBxrefInterPro:IPR000092
DBxrefPFAM:PF00348
Productterpenoid synthase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851958.1supercontigKZ851958.1:90840..92004 -
Powered by Drupal