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M747DRAFT_271113-T1, M747DRAFT_271113-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_271113-T1
Unique NameM747DRAFT_271113-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851899.1:257436..258716+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_271113-T1 ID=M747DRAFT_271113-T1|Name=M747DRAFT_271113-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1281bp|location=Sequence derived from alignment at KZ851899.1:257436..258716+ (Aspergillus niger ATCC 13496)
TTTGCTACTCCTCCTCCAAAGCATCACCGAGATCCCTCTCCCATCCAGGC
TACCTTCCGGGGCTTAATCACACTCTTCCAAACACAATGCCTGGAAGTGA
CGCTCTTCGCGCACTCAAGTTGCTCTCTCGCAGCTCCGGGGGTCTCCTCT
CGGGCGCTGAGACGACCACGGTAAGACCGACGTTTTTCGATTCCGCTGCT
AGTCTTTTGCACATGGCCGAATGCAAGATACTGACCATTGATGCCTCGAT
CTTATAGCAACGATGCCTGGCGAAGACTTTCTCCCGCTCGATGGCCACCG
AGGCCCAGTCTCCCGTTGACAACCTCACGAGGGAGGTTCCCAAGCCCGTG
TGGAATCCCGAACCCGTCAAGGCGACACTCTACTCATTCCCCTCGATGGA
GCCCCTGCGCTTCGTTGAGTATCCTCGCAACCACCTCCTGATGCCGCTAC
GCAAAGACATCCTGCACCGAGCCGTCGTCTACGAGGGTGACATGACCCGA
CAAGGTACCGCAAGCACCAAGTGGAGAGATGATGTGCATGGAAGTGGCAG
GAAGTTGCATGCGCAGAAGGGTACTGGCCGGGCCCGTGTTGGCGACAAGA
AATCCCCGATCCGGAGAGGTGGAGGTGTTGCTTTTGGCCCTCATCCCCGC
GACTTCTCTACGGAGCTCCCTCAGAAGATCTACGACCAGGCGTGGCGGAT
AGCCCTCAGTTACCGCTACAAGCGCGGCCAATTGATCATTGTCGACAACG
AAATCGCCCTTCCGGAAGGTGCCACTCCCCATATTGTTGAGGAGATTTTC
AAGGTCAACTGCTGGGGCCGGCACTATGGACGGTCAACATTGATCACGGA
CCAGCCGAACGAGGAGCTGTTCGAGACGGTGCGTCAGGCTGGCGAACACG
CGAAGATCCTGGACCGCCGTGACGTGGATGTGAAGGACCTGTTGGAGACT
GGACGCTTGATCATCGAGAAGCAGGCGCTGGACCGCATTCTGTCTCAGCA
TTCCAAGGATCTGAAGAACAAGCCGGCCAAGGCTTTGTACTAAATTTCTT
TTACCTGGCGATGGGGTCTTTTACTGGTTAGCTTCGTTCTGTGTTTTATT
TTGTACAAATAGATTCGAAATATGTATGATGGCATTACGGATTTTCAAGG
ATGAAAGTCACGGCATTCTTAGCAGAAACCTACGCCAAGCTGCCCGGTTA
TTCGTAAAGATCGATGTAGTTGGAAAGCACATGCCAGAGCGAGGTTGCCG
AACGGAGATCCTCCACGGTATTATAGCCAGG
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Coding sequence (CDS) from alignment at KZ851899.1:257436..258716+

>M747DRAFT_271113-T1 ID=M747DRAFT_271113-T1|Name=M747DRAFT_271113-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1740bp|location=Sequence derived from alignment at KZ851899.1:257436..258716+ (Aspergillus niger ATCC 13496)
ATGCCTGGAAGTGACGCTCTTCGCGCACTCAAGTTGCTCTCTCGCAGCTC
CGGGGGTCTCCTCTCGGGCGCTGAGACGACCACGCAACGATGCCTGGCGA
AGACTTTCTCCCGCTCGATGGCCACCGAGGCCCAGTCTCCCGTTGACAAC
CTCACGAGGGAGGTTCCCAAGCCCGTGTGGAATCCCGAACCCGTCAAGGC
GACACTCTACTCATTCCCCTCGATGGAGCCCCTGCGCTTCGTTGAGTATC
CTCGCAACCACCTCCTGATGCCGCTACGCAAAGACATCCTGCACCGAGCC
GTCGTCTACGAGGGTGACATGACCCGACAAGGTACCGCAAGCACCAAGTG
GAGAGATGATGTGCATGGAAGTGGCAGGAAGTTGCATGCGCAGAAGGGTA
CTGGCCGGGCCCGTGTTGGCGACAAGAAATCCCCGATCCGGAGAGGTGGA
GGTGTTGCTTTTGGCCCTCATCCCCGCGACTTCTCTACGGAGCTCCCTCA
GAAGATCTACGACCAGGCGTGGCGGATAGCCCTCAGTTACCGCTACAAGC
GCGGCCAATTGATCATTGTCGACAACGAAATCGCCCTTCCGGAAGGTGCC
ACTCCCCATATTGTTGAGGAGATTTTCAAGGTCAACTGCTGGGGCCGGCA
CTATGGACGGTCAACATTGATCACGGACCAGCCGAACGAGGAGCTGTTCG
AGACGGTGCGTCAGGCTGGCGAACACGCGAAGATCCTGGACCGCCGTGAC
GTGGATGTGAAGGACCTGTTGGAGACTGGACGCTTGATCATCGAGAAGCA
GGCGCTGGACCGCATTCTGTCTCAGCATTCCAAGGATCTGAAGAACAAGC
CGGCCAAGGCTTTGTACTAAATGCCTGGAAGTGACGCTCTTCGCGCACTC
AAGTTGCTCTCTCGCAGCTCCGGGGGTCTCCTCTCGGGCGCTGAGACGAC
CACGCAACGATGCCTGGCGAAGACTTTCTCCCGCTCGATGGCCACCGAGG
CCCAGTCTCCCGTTGACAACCTCACGAGGGAGGTTCCCAAGCCCGTGTGG
AATCCCGAACCCGTCAAGGCGACACTCTACTCATTCCCCTCGATGGAGCC
CCTGCGCTTCGTTGAGTATCCTCGCAACCACCTCCTGATGCCGCTACGCA
AAGACATCCTGCACCGAGCCGTCGTCTACGAGGGTGACATGACCCGACAA
GGTACCGCAAGCACCAAGTGGAGAGATGATGTGCATGGAAGTGGCAGGAA
GTTGCATGCGCAGAAGGGTACTGGCCGGGCCCGTGTTGGCGACAAGAAAT
CCCCGATCCGGAGAGGTGGAGGTGTTGCTTTTGGCCCTCATCCCCGCGAC
TTCTCTACGGAGCTCCCTCAGAAGATCTACGACCAGGCGTGGCGGATAGC
CCTCAGTTACCGCTACAAGCGCGGCCAATTGATCATTGTCGACAACGAAA
TCGCCCTTCCGGAAGGTGCCACTCCCCATATTGTTGAGGAGATTTTCAAG
GTCAACTGCTGGGGCCGGCACTATGGACGGTCAACATTGATCACGGACCA
GCCGAACGAGGAGCTGTTCGAGACGGTGCGTCAGGCTGGCGAACACGCGA
AGATCCTGGACCGCCGTGACGTGGATGTGAAGGACCTGTTGGAGACTGGA
CGCTTGATCATCGAGAAGCAGGCGCTGGACCGCATTCTGTCTCAGCATTC
CAAGGATCTGAAGAACAAGCCGGCCAAGGCTTTGTACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_271113M747DRAFT_271113Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_271113-T1.utr5p1M747DRAFT_271113-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_271113-T1.exon1M747DRAFT_271113-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_271113-T1.exon2M747DRAFT_271113-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_271113-T1.cdsM747DRAFT_271113-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_271113-T1.utr3p1M747DRAFT_271113-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_271113-T1M747DRAFT_271113-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264NNY
DBxrefInterPro:IPR013005
DBxrefInterPro:IPR023574
DBxrefInterPro:IPR002136
DBxrefPFAM:PF00573
Productribosomal protein L4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851899.1supercontigKZ851899.1:257436..258716 +
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