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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851900.1:1001561..1002522- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_272424-T1 ID=M747DRAFT_272424-T1|Name=M747DRAFT_272424-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=962bp|location=Sequence derived from alignment at KZ851900.1:1001561..1002522- (Aspergillus niger ATCC 13496)
CCACCGCTGTTGGGAAGCTCGCGGGGAGCTTCTTGGATTCATATTCACTT
TGACGTCGTTAAGAAGGCTTTTATCTACCTTTGAACTATCTCATTTCGCT
TGGAAGGATACGGCGACTCCAATAGAGTGCTTTTATCCTTTGCTTTCCAC
CTCTTACGGAGTTGATCCCATCTCTGTTTCGATCCGCCCACAACACTGAC
CCATCCATATTGATCACACGATCGCAAGATGGTAATTACCTCTGAAGCCT
ACCATGATCCAATATATCTACTGCGTCTACTGACTCTCACATGAACAGTT
ACCTCTCGGTCTCCTGACGGCCGCGCAAGGCCACCCCATGCTCGTGGAAC
TCAAGAACGGCGAAACCCTCAACGGACACCTCGCCAATTGCGACAACTGG
ATGAACCTGATACTCAAGGAAGTTGTTCAGACGAGTCCCGAAGGTGACCG
CTTCTTCCGGCTACCAGAGGTCTACGTCAGAGGAAACAATGTGAGTATCT
TGCCTGCGCCCACCCTAGATCCAATTTCAGGGAATCTCCCCGGCCCTCCC
TACTAACCGCTTATAGATCAAATACCTACGGATCCCCGAAGAAATCATAG
AGATGGTCAAGGAGCAACAGGCGAACCAGTCGCAAAATCGCAACCGCGGG
CCGCGTGAGGGTGGTAGGGGTGACCGAGGTCGTGGTGGAGGCCGGGGTCG
TGGACGCGGCCGCGGCCGTGGTGGCAGGGACGCTTGAAGTTTTGTTGGTT
TTTTTTATCTACGAAAGAATGAGAGAGATTATGAGCGATACCCCGGGGGG
CAAGGTTTAGTAGGGATTGAGTTCGCTAGGAAATGTCCGTTTGACGGGTT
AGTCGAGCATGGCCTTGGCGTATCTGGTTGTATTTGTCAATGGGAAAACA
TGCCACCTAGGCTTCCTTCTGTTCTCTGATACCATTGTAGTGTACGGTTT
ATTCGGAAAGTC back to topCoding sequence (CDS) from alignment at KZ851900.1:1001561..1002522- >M747DRAFT_272424-T1 ID=M747DRAFT_272424-T1|Name=M747DRAFT_272424-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1098bp|location=Sequence derived from alignment at KZ851900.1:1001561..1002522- (Aspergillus niger ATCC 13496)
ATCAAATACCTACGGATCCCCGAAGAAATCATAGAGATGGTCAAGGAGCA
ACAGGCGAACCAGTCGCAAAATCGCAACCGCGGGCCGCGTGAGGGTGGTA
GGGGTGACCGAGGTCGTGGTGGAGGCCGGGGTCGTGGACGCGGCCGCGGC
CGTGGTGGCAGGGACGCTTGATTACCTCTCGGTCTCCTGACGGCCGCGCA
AGGCCACCCCATGCTCGTGGAACTCAAGAACGGCGAAACCCTCAACGGAC
ACCTCGCCAATTGCGACAACTGGATGAACCTGATACTCAAGGAAGTTGTT
CAGACGAGTCCCGAAGGTGACCGCTTCTTCCGGCTACCAGAGGTCTACGT
CAGAGGAAACAATATGATCAAATACCTACGGATCCCCGAAGAAATCATAG
AGATGGTCAAGGAGCAACAGGCGAACCAGTCGCAAAATCGCAACCGCGGG
CCGCGTGAGGGTGGTAGGGGTGACCGAGGTCGTGGTGGAGGCCGGGGTCG
TGGACGCGGCCGCGGCCGTGGTGGCAGGGACGCTTGATTACCTCTCGGTC
TCCTGACGGCCGCGCAAGGCCACCCCATGCTCGTGGAACTCAAGAACGGC
GAAACCCTCAACGGACACCTCGCCAATTGCGACAACTGGATGAACCTGAT
ACTCAAGGAAGTTGTTCAGACGAGTCCCGAAGGTGACCGCTTCTTCCGGC
TACCAGAGGTCTACGTCAGAGGAAACAATATGATCAAATACCTACGGATC
CCCGAAGAAATCATAGAGATGGTCAAGGAGCAACAGGCGAACCAGTCGCA
AAATCGCAACCGCGGGCCGCGTGAGGGTGGTAGGGGTGACCGAGGTCGTG
GTGGAGGCCGGGGTCGTGGACGCGGCCGCGGCCGTGGTGGCAGGGACGCT
TGATTACCTCTCGGTCTCCTGACGGCCGCGCAAGGCCACCCCATGCTCGT
GGAACTCAAGAACGGCGAAACCCTCAACGGACACCTCGCCAATTGCGACA
ACTGGATGAACCTGATACTCAAGGAAGTTGTTCAGACGAGTCCCGAAGGT
GACCGCTTCTTCCGGCTACCAGAGGTCTACGTCAGAGGAAACAATATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000956 | nuclear-transcribed mRNA catabolic process |
| GO:0000398 | mRNA splicing, via spliceosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR010920 |
| DBxref | InterPro:IPR034101 |
| DBxref | InterPro:IPR001163 |
| DBxref | PFAM:PF01423 |
| Product | RNA processing protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851900.1 | supercontig | KZ851900.1:1001561..1002522 - |
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