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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851903.1:710199..712798- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_274291-T1 ID=M747DRAFT_274291-T1|Name=M747DRAFT_274291-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2600bp|location=Sequence derived from alignment at KZ851903.1:710199..712798- (Aspergillus niger ATCC 13496)
CTTTCACTTCACTAACCACCTTCGCCTTCACACACCGCCCCCGACAGGAT
TCACTGGTTTCCTGCCTCTTCCACCTTCTATTTCGAAACGCGACTCTATT
AATACTAGTCTCTGAGGGTGTTCTCCACTATTATTATAGAGCGACCTCGT
CCGAGTCAACGCTCTCTGGCCACCTAAGTCCCTTTTCACTCGGCGCGACT
GCGGTTCAGGTGGCATCTGTTACCCTGGAAGCCATCCATTCTCCTGCTGG
CGGCTTCCTTCCTTGAGCAGTCTAGCGCCGCTTTCCTTGTTACTGGTGTT
ACTAGGACCTGAATTTCAAGGCAACCTCTACCATCATTCACTATGGCTGA
CGACCTCGACGCCGAGCTCCTCGCTCTTGCGGGAGACTCCTCCGACGAGG
AAGCATCCCCCCCTGCCAAGGAGAGAGTCCAATCTCGCAGTCGATCATCA
TCCCCTCAGTCTCCCGACGCATCAGCTATGGGTCGCAAAGGCACTGCTAG
GACCGTTAAACGGGGCCGGAAGTCGAGAAGGAACGATGATGAAGAGGATG
GCGAACTGTATGTTTGACTTGCCACGCGTGCTTGCGATGCCGCTTGATGT
GGCCGTCACTGCGACTCGAGGACTCGGCTAATATGGCATTCTCTATAGGT
CCGCTGCTGAATCGCTCGACTCCGCTAGCATGTCCGAATCGGATTCAGGA
TCGGATTCCGAAGGCTCAGCCCCTGAGGCTGAAGATGAAGGCCCTATCTT
CCCTTACGAGAAACTATACTACTCTGCTAAGGACAAGGAGGAAATCATGG
CGATGCCCGAGATCCAACGAGAGCAGCTGCTTTCCGAGCGTGCGCAGCAG
GTTGATCGTCATAATCAAGATCTTGCTCTTCGTCGTCTCCTGGCTTCCCG
TGAACGCGAAGAGGCCCGCAAAGCGAAGAAGAACAAACGCAAGGCCAGTG
TGGCAAATCTTGATGAGGGTAATCGCAAGAGTTCGCGTCAGAAGATGACG
CTCGGTGGCCGTAAGGTGGGAGAGACCTCCGATGCTATTGAAGCCTACAA
GCGGCAGCGAGAGCAGAAGGGGAAGCGTGACGAGCTTCGTCGTCGTGAAC
CAGTCAAGGATCATAAAGCCCGTTCTCGTGATGACCGGATCTCCGACGAA
GATGCAGAGGGCGAAAGTGAAGTGGAGTGGGATGACAGAGAACGCTCACC
GTCGCCCCCGAAAGACGACCCGCCTGCTGAACTCCGGGATATCCAACGTA
CTCGGGTGGGTCGAAGTAACTTTGCCCAGGTCTGCTTTTACCCTGGGTTT
GATGACGCGATCTCCGGCTGCTATGCTCGTGTTAATATTGGGCCGAACCG
TGAGACCGGTCAGAATGAGTATCGTCTTTGCTTGATCAAGAGTAAGGCAC
CCCTCCTACGGTCGCGTTAGAGCATTCGTCGCTGACTTGTCCAGAATTTT
CCGAGGGAAAGCCCTATGCGATGGAGGGCCAAAATGGCCGGTCTTTTGTG
ACGAATCAGTACGCCGTATTAGCACATGGAAAGGCTGAGCGCGAGTTTCC
TTTTGTTGCATGCTCCGACTCTCCGTTTACAGAGGTAAGCCACTTGGCAT
GTCTCTTGGTTAACATATACTGATGCTCTGTAGGCGGAGTTCAATCGCTA
TCGTCAAACCATGGCCGTCGAAGACTGCAAGATGGCTACGAAGTCAATGG
TTGCCAGTAAGGTGACAGATATCAACCGGTTGCTGAACCACAAGTTCACC
AACGAGGAATTGAACGAGAAACTCCGCAAACAAGGCTCGTTGGATTCGAA
GTCCAAGTTCTTCAAGCGCGTGGAGGTCGAGAAGCAGCTGAAGCTTGCTC
GAGAAGCTGGTGATGATGCGGAAATGGAGCGACTGGAGGCTGAGCTGGCT
AGCATGGCGACACCGAAGCTCGCAGTTAGCAGCCATTCCAAGCCGCGTGT
GGACAAGCCCTCGGAACATGAACGTCTTGCTGAGCTGAACATACGCAACC
AGAAGCTCAACTACGAGAACGTGCGCCGGGCGCAGATAGAAGAGCGCAAG
GCCAGCCGTAAAGCGGCTGCAGCTGTCGCTCGTGGCGAAGCCGCCCACAA
CCCGTTCATGCGCGTTAGAACCCAAGCGCGGACCCATTACGACGTCAATG
GTAACGGTACCCCGACGGCTGAGAATAACGCGAGCCAAGAAAATACTGCT
TCAGAGACACCGTCCAAAGCGAGCACTCCGGCCAGCGGCACCCCGGCGGG
ATCCCAGAAGAAAACCAGCAAAGGTGGCGTTGCCTCCATCCGGCATCGGA
ACATGGATGACGAAAACATTGCGGCCTTGGATTTGGAGCTCGACATTGAA
ATATGATCTTGGGTAAGGAAAAACTTTGGGCACATCTAGCACACCACTAG
CATCCTACATACAGCATATGCGATCTTGCCGACGGCTTCTGATGGAAATG
GCACGATTTTGTTATTCGGGAAGCATTTGAGACAGCGTCGGATTCCAGGG
GGCGGTGTTTATTGGCGTAACGAGAAACATATCATGGGCGCTGTACGATA
CAGAAATAAAGCACCTTTATGAATTGGCTTCACCAGTTGTACAAATCTAC
back to topCoding sequence (CDS) from alignment at KZ851903.1:710199..712798- >M747DRAFT_274291-T1 ID=M747DRAFT_274291-T1|Name=M747DRAFT_274291-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=7284bp|location=Sequence derived from alignment at KZ851903.1:710199..712798- (Aspergillus niger ATCC 13496)
GCGGAGTTCAATCGCTATCGTCAAACCATGGCCGTCGAAGACTGCAAGAT
GGCTACGAAGTCAATGGTTGCCAGTAAGGTGACAGATATCAACCGGTTGC
TGAACCACAAGTTCACCAACGAGGAATTGAACGAGAAACTCCGCAAACAA
GGCTCGTTGGATTCGAAGTCCAAGTTCTTCAAGCGCGTGGAGGTCGAGAA
GCAGCTGAAGCTTGCTCGAGAAGCTGGTGATGATGCGGAAATGGAGCGAC
TGGAGGCTGAGCTGGCTAGCATGGCGACACCGAAGCTCGCAGTTAGCAGC
CATTCCAAGCCGCGTGTGGACAAGCCCTCGGAACATGAACGTCTTGCTGA
GCTGAACATACGCAACCAGAAGCTCAACTACGAGAACGTGCGCCGGGCGC
AGATAGAAGAGCGCAAGGCCAGCCGTAAAGCGGCTGCAGCTGTCGCTCGT
GGCGAAGCCGCCCACAACCCGTTCATGCGCGTTAGAACCCAAGCGCGGAC
CCATTACGACGTCAATGGTAACGGTACCCCGACGGCTGAGAATAACGCGA
GCCAAGAAAATACTGCTTCAGAGACACCGTCCAAAGCGAGCACTCCGGCC
AGCGGCACCCCGGCGGGATCCCAGAAGAAAACCAGCAAAGGTGGCGTTGC
CTCCATCCGGCATCGGAACATGGATGACGAAAACATTGCGGCCTTGGATT
TGGAGCTCGACATTGAAATATGAAATTTTCCGAGGGAAAGCCCTATGCGA
TGGAGGGCCAAAATGGCCGGTCTTTTGTGACGAATCAGTACGCCGTATTA
GCACATGGAAAGGCTGAGCGCGAGTTTCCTTTTGTTGCATGCTCCGACTC
TCCGTTTACAGAGGTCCGCTGCTGAATCGCTCGACTCCGCTAGCATGTCC
GAATCGGATTCAGGATCGGATTCCGAAGGCTCAGCCCCTGAGGCTGAAGA
TGAAGGCCCTATCTTCCCTTACGAGAAACTATACTACTCTGCTAAGGACA
AGGAGGAAATCATGGCGATGCCCGAGATCCAACGAGAGCAGCTGCTTTCC
GAGCGTGCGCAGCAGGTTGATCGTCATAATCAAGATCTTGCTCTTCGTCG
TCTCCTGGCTTCCCGTGAACGCGAAGAGGCCCGCAAAGCGAAGAAGAACA
AACGCAAGGCCAGTGTGGCAAATCTTGATGAGGGTAATCGCAAGAGTTCG
CGTCAGAAGATGACGCTCGGTGGCCGTAAGGTGGGAGAGACCTCCGATGC
TATTGAAGCCTACAAGCGGCAGCGAGAGCAGAAGGGGAAGCGTGACGAGC
TTCGTCGTCGTGAACCAGTCAAGGATCATAAAGCCCGTTCTCGTGATGAC
CGGATCTCCGACGAAGATGCAGAGGGCGAAAGTGAAGTGGAGTGGGATGA
CAGAGAACGCTCACCGTCGCCCCCGAAAGACGACCCGCCTGCTGAACTCC
GGGATATCCAACGTACTCGGGTGGGTCGAAGTAACTTTGCCCAGGTCTGC
TTTTACCCTGGGTTTGATGACGCGATCTCCGGCTGCTATGCTCGTGTTAA
TATTGGGCCGAACCGTGAGACCGGTCAGAATGAGTATCGTCTTTGCTTGA
TCAAGAATGGCTGACGACCTCGACGCCGAGCTCCTCGCTCTTGCGGGAGA
CTCCTCCGACGAGGAAGCATCCCCCCCTGCCAAGGAGAGAGTCCAATCTC
GCAGTCGATCATCATCCCCTCAGTCTCCCGACGCATCAGCTATGGGTCGC
AAAGGCACTGCTAGGACCGTTAAACGGGGCCGGAAGTCGAGAAGGAACGA
TGATGAAGAGGATGGCGAACTGCGGAGTTCAATCGCTATCGTCAAACCAT
GGCCGTCGAAGACTGCAAGATGGCTACGAAGTCAATGGTTGCCAGTAAGG
TGACAGATATCAACCGGTTGCTGAACCACAAGTTCACCAACGAGGAATTG
AACGAGAAACTCCGCAAACAAGGCTCGTTGGATTCGAAGTCCAAGTTCTT
CAAGCGCGTGGAGGTCGAGAAGCAGCTGAAGCTTGCTCGAGAAGCTGGTG
ATGATGCGGAAATGGAGCGACTGGAGGCTGAGCTGGCTAGCATGGCGACA
CCGAAGCTCGCAGTTAGCAGCCATTCCAAGCCGCGTGTGGACAAGCCCTC
GGAACATGAACGTCTTGCTGAGCTGAACATACGCAACCAGAAGCTCAACT
ACGAGAACGTGCGCCGGGCGCAGATAGAAGAGCGCAAGGCCAGCCGTAAA
GCGGCTGCAGCTGTCGCTCGTGGCGAAGCCGCCCACAACCCGTTCATGCG
CGTTAGAACCCAAGCGCGGACCCATTACGACGTCAATGGTAACGGTACCC
CGACGGCTGAGAATAACGCGAGCCAAGAAAATACTGCTTCAGAGACACCG
TCCAAAGCGAGCACTCCGGCCAGCGGCACCCCGGCGGGATCCCAGAAGAA
AACCAGCAAAGGTGGCGTTGCCTCCATCCGGCATCGGAACATGGATGACG
AAAACATTGCGGCCTTGGATTTGGAGCTCGACATTGAAATATGAAATTTT
CCGAGGGAAAGCCCTATGCGATGGAGGGCCAAAATGGCCGGTCTTTTGTG
ACGAATCAGTACGCCGTATTAGCACATGGAAAGGCTGAGCGCGAGTTTCC
TTTTGTTGCATGCTCCGACTCTCCGTTTACAGAGGTCCGCTGCTGAATCG
CTCGACTCCGCTAGCATGTCCGAATCGGATTCAGGATCGGATTCCGAAGG
CTCAGCCCCTGAGGCTGAAGATGAAGGCCCTATCTTCCCTTACGAGAAAC
TATACTACTCTGCTAAGGACAAGGAGGAAATCATGGCGATGCCCGAGATC
CAACGAGAGCAGCTGCTTTCCGAGCGTGCGCAGCAGGTTGATCGTCATAA
TCAAGATCTTGCTCTTCGTCGTCTCCTGGCTTCCCGTGAACGCGAAGAGG
CCCGCAAAGCGAAGAAGAACAAACGCAAGGCCAGTGTGGCAAATCTTGAT
GAGGGTAATCGCAAGAGTTCGCGTCAGAAGATGACGCTCGGTGGCCGTAA
GGTGGGAGAGACCTCCGATGCTATTGAAGCCTACAAGCGGCAGCGAGAGC
AGAAGGGGAAGCGTGACGAGCTTCGTCGTCGTGAACCAGTCAAGGATCAT
AAAGCCCGTTCTCGTGATGACCGGATCTCCGACGAAGATGCAGAGGGCGA
AAGTGAAGTGGAGTGGGATGACAGAGAACGCTCACCGTCGCCCCCGAAAG
ACGACCCGCCTGCTGAACTCCGGGATATCCAACGTACTCGGGTGGGTCGA
AGTAACTTTGCCCAGGTCTGCTTTTACCCTGGGTTTGATGACGCGATCTC
CGGCTGCTATGCTCGTGTTAATATTGGGCCGAACCGTGAGACCGGTCAGA
ATGAGTATCGTCTTTGCTTGATCAAGAATGGCTGACGACCTCGACGCCGA
GCTCCTCGCTCTTGCGGGAGACTCCTCCGACGAGGAAGCATCCCCCCCTG
CCAAGGAGAGAGTCCAATCTCGCAGTCGATCATCATCCCCTCAGTCTCCC
GACGCATCAGCTATGGGTCGCAAAGGCACTGCTAGGACCGTTAAACGGGG
CCGGAAGTCGAGAAGGAACGATGATGAAGAGGATGGCGAACTGCGGAGTT
CAATCGCTATCGTCAAACCATGGCCGTCGAAGACTGCAAGATGGCTACGA
AGTCAATGGTTGCCAGTAAGGTGACAGATATCAACCGGTTGCTGAACCAC
AAGTTCACCAACGAGGAATTGAACGAGAAACTCCGCAAACAAGGCTCGTT
GGATTCGAAGTCCAAGTTCTTCAAGCGCGTGGAGGTCGAGAAGCAGCTGA
AGCTTGCTCGAGAAGCTGGTGATGATGCGGAAATGGAGCGACTGGAGGCT
GAGCTGGCTAGCATGGCGACACCGAAGCTCGCAGTTAGCAGCCATTCCAA
GCCGCGTGTGGACAAGCCCTCGGAACATGAACGTCTTGCTGAGCTGAACA
TACGCAACCAGAAGCTCAACTACGAGAACGTGCGCCGGGCGCAGATAGAA
GAGCGCAAGGCCAGCCGTAAAGCGGCTGCAGCTGTCGCTCGTGGCGAAGC
CGCCCACAACCCGTTCATGCGCGTTAGAACCCAAGCGCGGACCCATTACG
ACGTCAATGGTAACGGTACCCCGACGGCTGAGAATAACGCGAGCCAAGAA
AATACTGCTTCAGAGACACCGTCCAAAGCGAGCACTCCGGCCAGCGGCAC
CCCGGCGGGATCCCAGAAGAAAACCAGCAAAGGTGGCGTTGCCTCCATCC
GGCATCGGAACATGGATGACGAAAACATTGCGGCCTTGGATTTGGAGCTC
GACATTGAAATATGAAATTTTCCGAGGGAAAGCCCTATGCGATGGAGGGC
CAAAATGGCCGGTCTTTTGTGACGAATCAGTACGCCGTATTAGCACATGG
AAAGGCTGAGCGCGAGTTTCCTTTTGTTGCATGCTCCGACTCTCCGTTTA
CAGAGGTCCGCTGCTGAATCGCTCGACTCCGCTAGCATGTCCGAATCGGA
TTCAGGATCGGATTCCGAAGGCTCAGCCCCTGAGGCTGAAGATGAAGGCC
CTATCTTCCCTTACGAGAAACTATACTACTCTGCTAAGGACAAGGAGGAA
ATCATGGCGATGCCCGAGATCCAACGAGAGCAGCTGCTTTCCGAGCGTGC
GCAGCAGGTTGATCGTCATAATCAAGATCTTGCTCTTCGTCGTCTCCTGG
CTTCCCGTGAACGCGAAGAGGCCCGCAAAGCGAAGAAGAACAAACGCAAG
GCCAGTGTGGCAAATCTTGATGAGGGTAATCGCAAGAGTTCGCGTCAGAA
GATGACGCTCGGTGGCCGTAAGGTGGGAGAGACCTCCGATGCTATTGAAG
CCTACAAGCGGCAGCGAGAGCAGAAGGGGAAGCGTGACGAGCTTCGTCGT
CGTGAACCAGTCAAGGATCATAAAGCCCGTTCTCGTGATGACCGGATCTC
CGACGAAGATGCAGAGGGCGAAAGTGAAGTGGAGTGGGATGACAGAGAAC
GCTCACCGTCGCCCCCGAAAGACGACCCGCCTGCTGAACTCCGGGATATC
CAACGTACTCGGGTGGGTCGAAGTAACTTTGCCCAGGTCTGCTTTTACCC
TGGGTTTGATGACGCGATCTCCGGCTGCTATGCTCGTGTTAATATTGGGC
CGAACCGTGAGACCGGTCAGAATGAGTATCGTCTTTGCTTGATCAAGAAT
GGCTGACGACCTCGACGCCGAGCTCCTCGCTCTTGCGGGAGACTCCTCCG
ACGAGGAAGCATCCCCCCCTGCCAAGGAGAGAGTCCAATCTCGCAGTCGA
TCATCATCCCCTCAGTCTCCCGACGCATCAGCTATGGGTCGCAAAGGCAC
TGCTAGGACCGTTAAACGGGGCCGGAAGTCGAGAAGGAACGATGATGAAG
AGGATGGCGAACTGCGGAGTTCAATCGCTATCGTCAAACCATGGCCGTCG
AAGACTGCAAGATGGCTACGAAGTCAATGGTTGCCAGTAAGGTGACAGAT
ATCAACCGGTTGCTGAACCACAAGTTCACCAACGAGGAATTGAACGAGAA
ACTCCGCAAACAAGGCTCGTTGGATTCGAAGTCCAAGTTCTTCAAGCGCG
TGGAGGTCGAGAAGCAGCTGAAGCTTGCTCGAGAAGCTGGTGATGATGCG
GAAATGGAGCGACTGGAGGCTGAGCTGGCTAGCATGGCGACACCGAAGCT
CGCAGTTAGCAGCCATTCCAAGCCGCGTGTGGACAAGCCCTCGGAACATG
AACGTCTTGCTGAGCTGAACATACGCAACCAGAAGCTCAACTACGAGAAC
GTGCGCCGGGCGCAGATAGAAGAGCGCAAGGCCAGCCGTAAAGCGGCTGC
AGCTGTCGCTCGTGGCGAAGCCGCCCACAACCCGTTCATGCGCGTTAGAA
CCCAAGCGCGGACCCATTACGACGTCAATGGTAACGGTACCCCGACGGCT
GAGAATAACGCGAGCCAAGAAAATACTGCTTCAGAGACACCGTCCAAAGC
GAGCACTCCGGCCAGCGGCACCCCGGCGGGATCCCAGAAGAAAACCAGCA
AAGGTGGCGTTGCCTCCATCCGGCATCGGAACATGGATGACGAAAACATT
GCGGCCTTGGATTTGGAGCTCGACATTGAAATATGAAATTTTCCGAGGGA
AAGCCCTATGCGATGGAGGGCCAAAATGGCCGGTCTTTTGTGACGAATCA
GTACGCCGTATTAGCACATGGAAAGGCTGAGCGCGAGTTTCCTTTTGTTG
CATGCTCCGACTCTCCGTTTACAGAGGTCCGCTGCTGAATCGCTCGACTC
CGCTAGCATGTCCGAATCGGATTCAGGATCGGATTCCGAAGGCTCAGCCC
CTGAGGCTGAAGATGAAGGCCCTATCTTCCCTTACGAGAAACTATACTAC
TCTGCTAAGGACAAGGAGGAAATCATGGCGATGCCCGAGATCCAACGAGA
GCAGCTGCTTTCCGAGCGTGCGCAGCAGGTTGATCGTCATAATCAAGATC
TTGCTCTTCGTCGTCTCCTGGCTTCCCGTGAACGCGAAGAGGCCCGCAAA
GCGAAGAAGAACAAACGCAAGGCCAGTGTGGCAAATCTTGATGAGGGTAA
TCGCAAGAGTTCGCGTCAGAAGATGACGCTCGGTGGCCGTAAGGTGGGAG
AGACCTCCGATGCTATTGAAGCCTACAAGCGGCAGCGAGAGCAGAAGGGG
AAGCGTGACGAGCTTCGTCGTCGTGAACCAGTCAAGGATCATAAAGCCCG
TTCTCGTGATGACCGGATCTCCGACGAAGATGCAGAGGGCGAAAGTGAAG
TGGAGTGGGATGACAGAGAACGCTCACCGTCGCCCCCGAAAGACGACCCG
CCTGCTGAACTCCGGGATATCCAACGTACTCGGGTGGGTCGAAGTAACTT
TGCCCAGGTCTGCTTTTACCCTGGGTTTGATGACGCGATCTCCGGCTGCT
ATGCTCGTGTTAATATTGGGCCGAACCGTGAGACCGGTCAGAATGAGTAT
CGTCTTTGCTTGATCAAGAATGGCTGACGACCTCGACGCCGAGCTCCTCG
CTCTTGCGGGAGACTCCTCCGACGAGGAAGCATCCCCCCCTGCCAAGGAG
AGAGTCCAATCTCGCAGTCGATCATCATCCCCTCAGTCTCCCGACGCATC
AGCTATGGGTCGCAAAGGCACTGCTAGGACCGTTAAACGGGGCCGGAAGT
CGAGAAGGAACGATGATGAAGAGGATGGCGAACT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264XOZ |
| DBxref | InterPro:IPR036128 |
| DBxref | InterPro:IPR004343 |
| DBxref | PFAM:PF03126 |
| Product | RNA polymerase II transcription elongation factor Rtf1p |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851903.1 | supercontig | KZ851903.1:710199..712798 - |
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