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M747DRAFT_275004-T1, M747DRAFT_275004-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_275004-T1
Unique NameM747DRAFT_275004-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851904.1:772693..773478+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_275004-T1 ID=M747DRAFT_275004-T1|Name=M747DRAFT_275004-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=786bp|location=Sequence derived from alignment at KZ851904.1:772693..773478+ (Aspergillus niger ATCC 13496)
AAAAAAAAAAAACCTCACATACCATCCAACAAAATGACTGGAGGCAAATC
TGGAGGCAAGGCCAGCGGCAGCAAGAACGCCCAATCGTATGCCACCCGTT
CATCTCGAGCGTCATCTCGAGATATTCATTAAATATACTGACCCGGTCAC
AGCCGTTCGTCCAAGGCCGGTCTCGCCTTTCCCGTTGGACGTGTTCATCG
TCTCCTCCGCAAGGGCAACTACGCTCAGCGTGTTGGTGCCGGTTAGTGAT
ACTCGTTTTAACCCAAAAGGCAACTCTAACCTCATGATAATAGGTGCTCC
CGTTTACCTCGCTGCCGTTCTTGAGTATCTCGCCGCCGAAATTCTTGAAT
TGGCTGGCAACGCTGCTCGCGATAACAAGAAGACCCGTATCATTCCCCGT
CACCTTCAGCTCGCCATCCGCAACGATGAGGAACTGAACAAGCTCCTGGG
TCATGTCACCATTGCCCAGGGTGGTGTCCTCCCCAACATCCACCAGAGTA
AGTATTGGCTCCATTTGTTAATTCAGCATGTGGTACTGACAATACATAGA
CCTTCTGCCCAAGAAGACCCCCAAGAGTGGAAAGGGTCCGGGAAGCCAGG
AGCTGTAAACAATTTCTTTCTAATTTGGGTTCTCTGATTCGGCGCGGTTT
GGTTCTCTTATTGATGTGATAACGGGGTTCTGGTCGGAACGTTTATGGCT
CTGCGATTTCTTTTTTTCTAGTTTCCACAGTTTATGGTTGTACATTATGT
CTACGGACATGGAATGATACCGACAGCATTTTCACT
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Coding sequence (CDS) from alignment at KZ851904.1:772693..773478+

>M747DRAFT_275004-T1 ID=M747DRAFT_275004-T1|Name=M747DRAFT_275004-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1620bp|location=Sequence derived from alignment at KZ851904.1:772693..773478+ (Aspergillus niger ATCC 13496)
ATGACTGGAGGCAAATCTGGAGGCAAGGCCAGCGGCAGCAAGAACGCCCA
ATCCCGTTCGTCCAAGGCCGGTCTCGCCTTTCCCGTTGGACGTGTTCATC
GTCTCCTCCGCAAGGGCAACTACGCTCAGCGTGTTGGTGCCGGTGCTCCC
GTTTACCTCGCTGCCGTTCTTGAGTATCTCGCCGCCGAAATTCTTGAATT
GGCTGGCAACGCTGCTCGCGATAACAAGAAGACCCGTATCATTCCCCGTC
ACCTTCAGCTCGCCATCCGCAACGATGAGGAACTGAACAAGCTCCTGGGT
CATGTCACCATTGCCCAGGGTGGTGTCCTCCCCAACATCCACCAGAACCT
TCTGCCCAAGAAGACCCCCAAGAGTGGAAAGGGTCCGGGAAGCCAGGAGC
TGTAAATGACTGGAGGCAAATCTGGAGGCAAGGCCAGCGGCAGCAAGAAC
GCCCAATCCCGTTCGTCCAAGGCCGGTCTCGCCTTTCCCGTTGGACGTGT
TCATCGTCTCCTCCGCAAGGGCAACTACGCTCAGCGTGTTGGTGCCGGTG
CTCCCGTTTACCTCGCTGCCGTTCTTGAGTATCTCGCCGCCGAAATTCTT
GAATTGGCTGGCAACGCTGCTCGCGATAACAAGAAGACCCGTATCATTCC
CCGTCACCTTCAGCTCGCCATCCGCAACGATGAGGAACTGAACAAGCTCC
TGGGTCATGTCACCATTGCCCAGGGTGGTGTCCTCCCCAACATCCACCAG
AACCTTCTGCCCAAGAAGACCCCCAAGAGTGGAAAGGGTCCGGGAAGCCA
GGAGCTGTAAATGACTGGAGGCAAATCTGGAGGCAAGGCCAGCGGCAGCA
AGAACGCCCAATCCCGTTCGTCCAAGGCCGGTCTCGCCTTTCCCGTTGGA
CGTGTTCATCGTCTCCTCCGCAAGGGCAACTACGCTCAGCGTGTTGGTGC
CGGTGCTCCCGTTTACCTCGCTGCCGTTCTTGAGTATCTCGCCGCCGAAA
TTCTTGAATTGGCTGGCAACGCTGCTCGCGATAACAAGAAGACCCGTATC
ATTCCCCGTCACCTTCAGCTCGCCATCCGCAACGATGAGGAACTGAACAA
GCTCCTGGGTCATGTCACCATTGCCCAGGGTGGTGTCCTCCCCAACATCC
ACCAGAACCTTCTGCCCAAGAAGACCCCCAAGAGTGGAAAGGGTCCGGGA
AGCCAGGAGCTGTAAATGACTGGAGGCAAATCTGGAGGCAAGGCCAGCGG
CAGCAAGAACGCCCAATCCCGTTCGTCCAAGGCCGGTCTCGCCTTTCCCG
TTGGACGTGTTCATCGTCTCCTCCGCAAGGGCAACTACGCTCAGCGTGTT
GGTGCCGGTGCTCCCGTTTACCTCGCTGCCGTTCTTGAGTATCTCGCCGC
CGAAATTCTTGAATTGGCTGGCAACGCTGCTCGCGATAACAAGAAGACCC
GTATCATTCCCCGTCACCTTCAGCTCGCCATCCGCAACGATGAGGAACTG
AACAAGCTCCTGGGTCATGTCACCATTGCCCAGGGTGGTGTCCTCCCCAA
CATCCACCAGAACCTTCTGCCCAAGAAGACCCCCAAGAGTGGAAAGGGTC
CGGGAAGCCAGGAGCTGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0000786nucleosome
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_275004M747DRAFT_275004Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_275004-T1M747DRAFT_275004-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_275004-T1.utr5p1M747DRAFT_275004-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_275004-T1.exon1M747DRAFT_275004-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_275004-T1.exon2M747DRAFT_275004-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_275004-T1.exon3M747DRAFT_275004-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_275004-T1.exon4M747DRAFT_275004-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_275004-T1.cdsM747DRAFT_275004-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_275004-T1.utr3p1M747DRAFT_275004-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR032458
DBxrefInterPro:IPR007125
DBxrefInterPro:IPR032454
DBxrefInterPro:IPR009072
DBxrefInterPro:IPR002119
DBxrefPFAM:PF16211
DBxrefPFAM:PF00125
DBxrefPFAM:PF00808
Productputative histone H2A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851904.1supercontigKZ851904.1:772693..773478 +
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