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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851907.1:363096..365192- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_276598-T1 ID=M747DRAFT_276598-T1|Name=M747DRAFT_276598-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2097bp|location=Sequence derived from alignment at KZ851907.1:363096..365192- (Aspergillus niger ATCC 13496)
ATGTCTGCCTCTTGTTCAGCGTTGAGACGGCTGACCCACAGGTCTCCCCG
CACTTGGCCCTCCCGCATCTCCTCCGTCTCCAGGCCTGCATCTTCTCTTT
CCTCCGTTGCTCGTCCGAGTCGCAGCACACCCTCAACTTTTTCTCACATC
TCTCGATTTTCCACCATGTCTCCCCTTCAACATGCTGCTCCCGTCGTTCC
CGGCGATAAGCCGTACGACCCAGAGATCAAGGATATGGCCGACTATATCC
ACAACTACAATGTGAACTCGGACTTGGCGGTACGAGGGTTCTCCCATGTT
TTGATTGACTTTCTTCTGTGTGCGATGGACTAATTGAAGACATCCTGACT
TTTAGTATGACACCGCCCGTTTGGTGTTCCTCGACACTCTGGGGTGCGGT
TTGGAGGCATTGAAGTTCAAGGAATGCTCCAAGCTCCTGGGCCCGGTGGT
GGACGGCACCGTGGTGCCCAACGGAACTCGCGTTCCTGGAACGCCCTACC
AGCTGGACCCTGTCAACGGCGCTTTCAACATTGGCGCTATGATCCGCTGG
CTGGACTACAACGACTGCTGGTTGGCTGCTGAATGGGGTCACCCCTCGGA
CAACCTGGGTGGAATCCTTGCTGTCGCCGACTGGGTTTCTCGCACAAACC
GTGCGGGCGGAAACATTGCCAACGGCAAGATCTTCAAGGTCAAGGACGTC
CTGGAGGCCATGATCAAGGCGCACGAGATTCAGGGTGTGTTGGCGCTGGA
GAACTCCTTCAACAAGGTCGGCTTGGACCACGTCGTTCTCGTCAAGGTTG
CTACCACTGCTGTCGTTGCAAAGATGCTCGGCCTTAGCGAGAAGCAGACC
GCAGATGCGATTACCCAAGCATTCGTGGACGGACAGTCTCTCCGTACCTA
CAGACACTCCCCCAACACCATGTCGAGGAAGTCCTGGGCTGCGGGTGACG
CATGCCAGCGGGCCGTGAACCTCGTCTTGAAGGTGCAGAAGGGCGAGGGT
GGCCTGCACACCGTCCTGTCTGCTCCCGTTTGGGGTTTCTATGATGTCCT
GTTCAAGGGCAACAAGTTCCAGTTCCAGCGCCCCTACGGTAGTTATGTCA
TGGAGAATGTTCTGTTCAAGGTCTCCTACCCGGGTAAGTCTAGCATCAGA
CGTCAGTATGGAGGGAATACTAACAGTTGCCATGATAGCCGAGTTCCACT
CCCAGACCGCGATCGAGGCCGCTGAGATGGTTAACGTGAAGCTCAAGGCT
CTCGGAAAGACTGCCGCCGACATTAAGGAGATCAGAAACCGCACCCACGA
GGCGTGCATTCGTATCATCGACAAGCAGTTCAAGGCGATGGACAACTTCG
CCGATCGTGACCACTGTGTTCAGGTAGGTCCTGCCGTATCCAAAATTTGA
GTGTCATGCACCACGCATACTGACAACCGCGCCAGTACATGGTTGCGACC
ATGTTGGTCTTCAACCGGTTGACTGCCAACGACTACGCCGACGGATCGGA
GGCTGCTACTTCTCAGCTCCTGGAAGACCTGCGCAAGCGCATTTACTGTG
TCGAGGATCCCCAGTTCACTAAGGATTACCACGACCCTGCGAAGCGCACC
ATCCCCAACGCCCTTACCGTTACTCTGAATGACGGAACGGTGCTGGATGA
GGTGGTTGTCGAGGCACCCTTGGGCCACCGCCTGCGGCGTGAGGAGGCCA
AGCCGGAGATTCTGGCCAAGTACAAGCGTCATCTGCAGGCGCACTTTGAC
CAGGCCCGCATTGACCAGCTGATTCAGGTTGGCTGGGACCAGGCCGCTCT
TGAGGGCTACGACGTTGACCAGTACGTCGACTTGTATGTCAAGGACCAGA
TGGTGGCAGCTCAGTAGAGTCATGATTGTATATGCGGCATGGAGAAATTA
TACCATAATCAGAAGCGAGACTTTGGAGACATCGTGTATGAGATTAACGA
GAATTAGCCACTGATAGAATACATTGAATTACCATATGGTGGGACAGCGA
TAATCAGGATTCTGCAGGCAGGAGGAATGAATAGAGGTCGGGCTAGGATA
CTAGTGGATGGCCTCGCTGCCGACGGTTACGCGACACGCTGCCGAAC back to topCoding sequence (CDS) from alignment at KZ851907.1:363096..365192- >M747DRAFT_276598-T1 ID=M747DRAFT_276598-T1|Name=M747DRAFT_276598-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=6696bp|location=Sequence derived from alignment at KZ851907.1:363096..365192- (Aspergillus niger ATCC 13496)
TACATGGTTGCGACCATGTTGGTCTTCAACCGGTTGACTGCCAACGACTA
CGCCGACGGATCGGAGGCTGCTACTTCTCAGCTCCTGGAAGACCTGCGCA
AGCGCATTTACTGTGTCGAGGATCCCCAGTTCACTAAGGATTACCACGAC
CCTGCGAAGCGCACCATCCCCAACGCCCTTACCGTTACTCTGAATGACGG
AACGGTGCTGGATGAGGTGGTTGTCGAGGCACCCTTGGGCCACCGCCTGC
GGCGTGAGGAGGCCAAGCCGGAGATTCTGGCCAAGTACAAGCGTCATCTG
CAGGCGCACTTTGACCAGGCCCGCATTGACCAGCTGATTCAGGTTGGCTG
GGACCAGGCCGCTCTTGAGGGCTACGACGTTGACCAGTACGTCGACTTGT
ATGTCAAGGACCAGATGGTGGCAGCTCAGTAGCCGAGTTCCACTCCCAGA
CCGCGATCGAGGCCGCTGAGATGGTTAACGTGAAGCTCAAGGCTCTCGGA
AAGACTGCCGCCGACATTAAGGAGATCAGAAACCGCACCCACGAGGCGTG
CATTCGTATCATCGACAAGCAGTTCAAGGCGATGGACAACTTCGCCGATC
GTGACCACTGTGTTCAGTATGACACCGCCCGTTTGGTGTTCCTCGACACT
CTGGGGTGCGGTTTGGAGGCATTGAAGTTCAAGGAATGCTCCAAGCTCCT
GGGCCCGGTGGTGGACGGCACCGTGGTGCCCAACGGAACTCGCGTTCCTG
GAACGCCCTACCAGCTGGACCCTGTCAACGGCGCTTTCAACATTGGCGCT
ATGATCCGCTGGCTGGACTACAACGACTGCTGGTTGGCTGCTGAATGGGG
TCACCCCTCGGACAACCTGGGTGGAATCCTTGCTGTCGCCGACTGGGTTT
CTCGCACAAACCGTGCGGGCGGAAACATTGCCAACGGCAAGATCTTCAAG
GTCAAGGACGTCCTGGAGGCCATGATCAAGGCGCACGAGATTCAGGGTGT
GTTGGCGCTGGAGAACTCCTTCAACAAGGTCGGCTTGGACCACGTCGTTC
TCGTCAAGGTTGCTACCACTGCTGTCGTTGCAAAGATGCTCGGCCTTAGC
GAGAAGCAGACCGCAGATGCGATTACCCAAGCATTCGTGGACGGACAGTC
TCTCCGTACCTACAGACACTCCCCCAACACCATGTCGAGGAAGTCCTGGG
CTGCGGGTGACGCATGCCAGCGGGCCGTGAACCTCGTCTTGAAGGTGCAG
AAGGGCGAGGGTGGCCTGCACACCGTCCTGTCTGCTCCCGTTTGGGGTTT
CTATGATGTCCTGTTCAAGGGCAACAAGTTCCAGTTCCAGCGCCCCTACG
GTAGTTATGTCATGGAGAATGTTCTGTTCAAGGTCTCCTACCCGGATGTC
TGCCTCTTGTTCAGCGTTGAGACGGCTGACCCACAGGTCTCCCCGCACTT
GGCCCTCCCGCATCTCCTCCGTCTCCAGGCCTGCATCTTCTCTTTCCTCC
GTTGCTCGTCCGAGTCGCAGCACACCCTCAACTTTTTCTCACATCTCTCG
ATTTTCCACCATGTCTCCCCTTCAACATGCTGCTCCCGTCGTTCCCGGCG
ATAAGCCGTACGACCCAGAGATCAAGGATATGGCCGACTATATCCACAAC
TACAATGTGAACTCGGACTTGGCGTACATGGTTGCGACCATGTTGGTCTT
CAACCGGTTGACTGCCAACGACTACGCCGACGGATCGGAGGCTGCTACTT
CTCAGCTCCTGGAAGACCTGCGCAAGCGCATTTACTGTGTCGAGGATCCC
CAGTTCACTAAGGATTACCACGACCCTGCGAAGCGCACCATCCCCAACGC
CCTTACCGTTACTCTGAATGACGGAACGGTGCTGGATGAGGTGGTTGTCG
AGGCACCCTTGGGCCACCGCCTGCGGCGTGAGGAGGCCAAGCCGGAGATT
CTGGCCAAGTACAAGCGTCATCTGCAGGCGCACTTTGACCAGGCCCGCAT
TGACCAGCTGATTCAGGTTGGCTGGGACCAGGCCGCTCTTGAGGGCTACG
ACGTTGACCAGTACGTCGACTTGTATGTCAAGGACCAGATGGTGGCAGCT
CAGTAGCCGAGTTCCACTCCCAGACCGCGATCGAGGCCGCTGAGATGGTT
AACGTGAAGCTCAAGGCTCTCGGAAAGACTGCCGCCGACATTAAGGAGAT
CAGAAACCGCACCCACGAGGCGTGCATTCGTATCATCGACAAGCAGTTCA
AGGCGATGGACAACTTCGCCGATCGTGACCACTGTGTTCAGTATGACACC
GCCCGTTTGGTGTTCCTCGACACTCTGGGGTGCGGTTTGGAGGCATTGAA
GTTCAAGGAATGCTCCAAGCTCCTGGGCCCGGTGGTGGACGGCACCGTGG
TGCCCAACGGAACTCGCGTTCCTGGAACGCCCTACCAGCTGGACCCTGTC
AACGGCGCTTTCAACATTGGCGCTATGATCCGCTGGCTGGACTACAACGA
CTGCTGGTTGGCTGCTGAATGGGGTCACCCCTCGGACAACCTGGGTGGAA
TCCTTGCTGTCGCCGACTGGGTTTCTCGCACAAACCGTGCGGGCGGAAAC
ATTGCCAACGGCAAGATCTTCAAGGTCAAGGACGTCCTGGAGGCCATGAT
CAAGGCGCACGAGATTCAGGGTGTGTTGGCGCTGGAGAACTCCTTCAACA
AGGTCGGCTTGGACCACGTCGTTCTCGTCAAGGTTGCTACCACTGCTGTC
GTTGCAAAGATGCTCGGCCTTAGCGAGAAGCAGACCGCAGATGCGATTAC
CCAAGCATTCGTGGACGGACAGTCTCTCCGTACCTACAGACACTCCCCCA
ACACCATGTCGAGGAAGTCCTGGGCTGCGGGTGACGCATGCCAGCGGGCC
GTGAACCTCGTCTTGAAGGTGCAGAAGGGCGAGGGTGGCCTGCACACCGT
CCTGTCTGCTCCCGTTTGGGGTTTCTATGATGTCCTGTTCAAGGGCAACA
AGTTCCAGTTCCAGCGCCCCTACGGTAGTTATGTCATGGAGAATGTTCTG
TTCAAGGTCTCCTACCCGGATGTCTGCCTCTTGTTCAGCGTTGAGACGGC
TGACCCACAGGTCTCCCCGCACTTGGCCCTCCCGCATCTCCTCCGTCTCC
AGGCCTGCATCTTCTCTTTCCTCCGTTGCTCGTCCGAGTCGCAGCACACC
CTCAACTTTTTCTCACATCTCTCGATTTTCCACCATGTCTCCCCTTCAAC
ATGCTGCTCCCGTCGTTCCCGGCGATAAGCCGTACGACCCAGAGATCAAG
GATATGGCCGACTATATCCACAACTACAATGTGAACTCGGACTTGGCGTA
CATGGTTGCGACCATGTTGGTCTTCAACCGGTTGACTGCCAACGACTACG
CCGACGGATCGGAGGCTGCTACTTCTCAGCTCCTGGAAGACCTGCGCAAG
CGCATTTACTGTGTCGAGGATCCCCAGTTCACTAAGGATTACCACGACCC
TGCGAAGCGCACCATCCCCAACGCCCTTACCGTTACTCTGAATGACGGAA
CGGTGCTGGATGAGGTGGTTGTCGAGGCACCCTTGGGCCACCGCCTGCGG
CGTGAGGAGGCCAAGCCGGAGATTCTGGCCAAGTACAAGCGTCATCTGCA
GGCGCACTTTGACCAGGCCCGCATTGACCAGCTGATTCAGGTTGGCTGGG
ACCAGGCCGCTCTTGAGGGCTACGACGTTGACCAGTACGTCGACTTGTAT
GTCAAGGACCAGATGGTGGCAGCTCAGTAGCCGAGTTCCACTCCCAGACC
GCGATCGAGGCCGCTGAGATGGTTAACGTGAAGCTCAAGGCTCTCGGAAA
GACTGCCGCCGACATTAAGGAGATCAGAAACCGCACCCACGAGGCGTGCA
TTCGTATCATCGACAAGCAGTTCAAGGCGATGGACAACTTCGCCGATCGT
GACCACTGTGTTCAGTATGACACCGCCCGTTTGGTGTTCCTCGACACTCT
GGGGTGCGGTTTGGAGGCATTGAAGTTCAAGGAATGCTCCAAGCTCCTGG
GCCCGGTGGTGGACGGCACCGTGGTGCCCAACGGAACTCGCGTTCCTGGA
ACGCCCTACCAGCTGGACCCTGTCAACGGCGCTTTCAACATTGGCGCTAT
GATCCGCTGGCTGGACTACAACGACTGCTGGTTGGCTGCTGAATGGGGTC
ACCCCTCGGACAACCTGGGTGGAATCCTTGCTGTCGCCGACTGGGTTTCT
CGCACAAACCGTGCGGGCGGAAACATTGCCAACGGCAAGATCTTCAAGGT
CAAGGACGTCCTGGAGGCCATGATCAAGGCGCACGAGATTCAGGGTGTGT
TGGCGCTGGAGAACTCCTTCAACAAGGTCGGCTTGGACCACGTCGTTCTC
GTCAAGGTTGCTACCACTGCTGTCGTTGCAAAGATGCTCGGCCTTAGCGA
GAAGCAGACCGCAGATGCGATTACCCAAGCATTCGTGGACGGACAGTCTC
TCCGTACCTACAGACACTCCCCCAACACCATGTCGAGGAAGTCCTGGGCT
GCGGGTGACGCATGCCAGCGGGCCGTGAACCTCGTCTTGAAGGTGCAGAA
GGGCGAGGGTGGCCTGCACACCGTCCTGTCTGCTCCCGTTTGGGGTTTCT
ATGATGTCCTGTTCAAGGGCAACAAGTTCCAGTTCCAGCGCCCCTACGGT
AGTTATGTCATGGAGAATGTTCTGTTCAAGGTCTCCTACCCGGATGTCTG
CCTCTTGTTCAGCGTTGAGACGGCTGACCCACAGGTCTCCCCGCACTTGG
CCCTCCCGCATCTCCTCCGTCTCCAGGCCTGCATCTTCTCTTTCCTCCGT
TGCTCGTCCGAGTCGCAGCACACCCTCAACTTTTTCTCACATCTCTCGAT
TTTCCACCATGTCTCCCCTTCAACATGCTGCTCCCGTCGTTCCCGGCGAT
AAGCCGTACGACCCAGAGATCAAGGATATGGCCGACTATATCCACAACTA
CAATGTGAACTCGGACTTGGCGTACATGGTTGCGACCATGTTGGTCTTCA
ACCGGTTGACTGCCAACGACTACGCCGACGGATCGGAGGCTGCTACTTCT
CAGCTCCTGGAAGACCTGCGCAAGCGCATTTACTGTGTCGAGGATCCCCA
GTTCACTAAGGATTACCACGACCCTGCGAAGCGCACCATCCCCAACGCCC
TTACCGTTACTCTGAATGACGGAACGGTGCTGGATGAGGTGGTTGTCGAG
GCACCCTTGGGCCACCGCCTGCGGCGTGAGGAGGCCAAGCCGGAGATTCT
GGCCAAGTACAAGCGTCATCTGCAGGCGCACTTTGACCAGGCCCGCATTG
ACCAGCTGATTCAGGTTGGCTGGGACCAGGCCGCTCTTGAGGGCTACGAC
GTTGACCAGTACGTCGACTTGTATGTCAAGGACCAGATGGTGGCAGCTCA
GTAGCCGAGTTCCACTCCCAGACCGCGATCGAGGCCGCTGAGATGGTTAA
CGTGAAGCTCAAGGCTCTCGGAAAGACTGCCGCCGACATTAAGGAGATCA
GAAACCGCACCCACGAGGCGTGCATTCGTATCATCGACAAGCAGTTCAAG
GCGATGGACAACTTCGCCGATCGTGACCACTGTGTTCAGTATGACACCGC
CCGTTTGGTGTTCCTCGACACTCTGGGGTGCGGTTTGGAGGCATTGAAGT
TCAAGGAATGCTCCAAGCTCCTGGGCCCGGTGGTGGACGGCACCGTGGTG
CCCAACGGAACTCGCGTTCCTGGAACGCCCTACCAGCTGGACCCTGTCAA
CGGCGCTTTCAACATTGGCGCTATGATCCGCTGGCTGGACTACAACGACT
GCTGGTTGGCTGCTGAATGGGGTCACCCCTCGGACAACCTGGGTGGAATC
CTTGCTGTCGCCGACTGGGTTTCTCGCACAAACCGTGCGGGCGGAAACAT
TGCCAACGGCAAGATCTTCAAGGTCAAGGACGTCCTGGAGGCCATGATCA
AGGCGCACGAGATTCAGGGTGTGTTGGCGCTGGAGAACTCCTTCAACAAG
GTCGGCTTGGACCACGTCGTTCTCGTCAAGGTTGCTACCACTGCTGTCGT
TGCAAAGATGCTCGGCCTTAGCGAGAAGCAGACCGCAGATGCGATTACCC
AAGCATTCGTGGACGGACAGTCTCTCCGTACCTACAGACACTCCCCCAAC
ACCATGTCGAGGAAGTCCTGGGCTGCGGGTGACGCATGCCAGCGGGCCGT
GAACCTCGTCTTGAAGGTGCAGAAGGGCGAGGGTGGCCTGCACACCGTCC
TGTCTGCTCCCGTTTGGGGTTTCTATGATGTCCTGTTCAAGGGCAACAAG
TTCCAGTTCCAGCGCCCCTACGGTAGTTATGTCATGGAGAATGTTCTGTT
CAAGGTCTCCTACCCGGATGTCTGCCTCTTGTTCAGCGTTGAGACGGCTG
ACCCACAGGTCTCCCCGCACTTGGCCCTCCCGCATCTCCTCCGTCTCCAG
GCCTGCATCTTCTCTTTCCTCCGTTGCTCGTCCGAGTCGCAGCACACCCT
CAACTTTTTCTCACATCTCTCGATTTTCCACCATGTCTCCCCTTCAACAT
GCTGCTCCCGTCGTTCCCGGCGATAAGCCGTACGACCCAGAGATCAAGGA
TATGGCCGACTATATCCACAACTACAATGTGAACTCGGACTTGGCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0019629 | propionate catabolic process, 2-methylcitrate cycle |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016829 | lyase activity |
| GO:0051537 | 2 iron, 2 sulfur cluster binding |
| GO:0047547 | 2-methylcitrate dehydratase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036148 |
| DBxref | InterPro:IPR005656 |
| DBxref | InterPro:IPR012705 |
| DBxref | InterPro:IPR042188 |
| DBxref | InterPro:IPR042183 |
| DBxref | PFAM:PF03972 |
| Product | ATP-binding cassette transporter CGR1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851907.1 | supercontig | KZ851907.1:363096..365192 - |
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