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M747DRAFT_284338-T1, M747DRAFT_284338-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_284338-T1
Unique NameM747DRAFT_284338-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851928.1:52978..54100+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_284338-T1 ID=M747DRAFT_284338-T1|Name=M747DRAFT_284338-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1123bp|location=Sequence derived from alignment at KZ851928.1:52978..54100+ (Aspergillus niger ATCC 13496)
AAACACTCTACAGCAACTTATCGGGCTTACATGCTTATAGTGTGAGATCC
ATCTTTGTCAAGTCTACATTATTACTAGTACAATTCTCATATACGGCCAA
CGGCGCATGTACATCACCCGAAAGCCGGAACATTCCTCTGAGGTCGTCCC
CAATCGTCATGTACGGCGAACACGGAAACAAGCTTGTATGTGCTTTTCTA
ATGAGCCATGCTTTATGAATAACCCGTCCTGACGAAACCCACAAACAGGT
TCAACATGCCAAGCGCACTCAAGCTCTCACCCATCTCCCTCCCTACCAAA
CCGAATTGGTCCGTTCCGTAGCCCGCGAAGTACGCGACCTCGACCGTGAT
GTCGCACACCTCCTCGGTCCATTCGAGGGCAGTTTCAATCCGTCACAAGA
ACCAGCCGTTGCCTGTGCCCTCTTAGTGGATCATCTCTGCATGCGCCGCA
ACAAACGATGTCTTCTTGCCTACCACCGTGTCCGCGCTGAAAAGCTCGAG
GAGCTATGCTGGAACGGCGTTGATTTGCTCGAACAGCAGCTACCGACGGC
AGATGAAGGGGCTGCAGGTGCATCAGGCCAGGGGAACGGGGGATATGCAG
CGATGGGCACTGCGAGTGGAAACCACAGTTCGTTGAGTCCGGAAGAAGAA
GAATACTTCCGACAATATAGCGATCTTCTGGCGGCGTATAAGGGACAGTG
GACGGATATTGATCTTACGGGAAGCCTGGAGCCCCCGAAGGATCTCTTCA
TAGACGTGAGAGTCTTGAAGGATGCGGGGGAGATTCAGACTGAGTATGGG
TATGTGAGGCATTTTCTATATTTTCCCTCGCGCGTATTGTTGATCGGCGG
GTTGGAATGCTGACATTGCATATAGGGTGATCAATTTGACGAAAAACAGT
CAACTCTACGTGCGGCAAGGGGATGTGGAACGATTAATCGCGCAGGGGTT
TCTGGAGCGTCTGAGTTGATGGAGGATGATGAGTTTCAGATCATGCAATT
TATGTCTTATGATACCCCAATGATTGATGCCTCTGAACGGAGTATAGTAA
AGGACGGTCTAGCTAGGATATGCTGTGTAGCGTTGTTTTCTTTTTTTCAA
GGATCCATTTTTTTTTCATCTTT
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Coding sequence (CDS) from alignment at KZ851928.1:52978..54100+

>M747DRAFT_284338-T1 ID=M747DRAFT_284338-T1|Name=M747DRAFT_284338-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2016bp|location=Sequence derived from alignment at KZ851928.1:52978..54100+ (Aspergillus niger ATCC 13496)
ATGTACGGCGAACACGGAAACAAGCTTGTTCAACATGCCAAGCGCACTCA
AGCTCTCACCCATCTCCCTCCCTACCAAACCGAATTGGTCCGTTCCGTAG
CCCGCGAAGTACGCGACCTCGACCGTGATGTCGCACACCTCCTCGGTCCA
TTCGAGGGCAGTTTCAATCCGTCACAAGAACCAGCCGTTGCCTGTGCCCT
CTTAGTGGATCATCTCTGCATGCGCCGCAACAAACGATGTCTTCTTGCCT
ACCACCGTGTCCGCGCTGAAAAGCTCGAGGAGCTATGCTGGAACGGCGTT
GATTTGCTCGAACAGCAGCTACCGACGGCAGATGAAGGGGCTGCAGGTGC
ATCAGGCCAGGGGAACGGGGGATATGCAGCGATGGGCACTGCGAGTGGAA
ACCACAGTTCGTTGAGTCCGGAAGAAGAAGAATACTTCCGACAATATAGC
GATCTTCTGGCGGCGTATAAGGGACAGTGGACGGATATTGATCTTACGGG
AAGCCTGGAGCCCCCGAAGGATCTCTTCATAGACGTGAGAGTCTTGAAGG
ATGCGGGGGAGATTCAGACTGAGTATGGGGTGATCAATTTGACGAAAAAC
AGTCAACTCTACGTGCGGCAAGGGGATGTGGAACGATTAATCGCGCAGGG
GTTTCTGGAGCGTCTGAGTTGAATGTACGGCGAACACGGAAACAAGCTTG
TTCAACATGCCAAGCGCACTCAAGCTCTCACCCATCTCCCTCCCTACCAA
ACCGAATTGGTCCGTTCCGTAGCCCGCGAAGTACGCGACCTCGACCGTGA
TGTCGCACACCTCCTCGGTCCATTCGAGGGCAGTTTCAATCCGTCACAAG
AACCAGCCGTTGCCTGTGCCCTCTTAGTGGATCATCTCTGCATGCGCCGC
AACAAACGATGTCTTCTTGCCTACCACCGTGTCCGCGCTGAAAAGCTCGA
GGAGCTATGCTGGAACGGCGTTGATTTGCTCGAACAGCAGCTACCGACGG
CAGATGAAGGGGCTGCAGGTGCATCAGGCCAGGGGAACGGGGGATATGCA
GCGATGGGCACTGCGAGTGGAAACCACAGTTCGTTGAGTCCGGAAGAAGA
AGAATACTTCCGACAATATAGCGATCTTCTGGCGGCGTATAAGGGACAGT
GGACGGATATTGATCTTACGGGAAGCCTGGAGCCCCCGAAGGATCTCTTC
ATAGACGTGAGAGTCTTGAAGGATGCGGGGGAGATTCAGACTGAGTATGG
GGTGATCAATTTGACGAAAAACAGTCAACTCTACGTGCGGCAAGGGGATG
TGGAACGATTAATCGCGCAGGGGTTTCTGGAGCGTCTGAGTTGAATGTAC
GGCGAACACGGAAACAAGCTTGTTCAACATGCCAAGCGCACTCAAGCTCT
CACCCATCTCCCTCCCTACCAAACCGAATTGGTCCGTTCCGTAGCCCGCG
AAGTACGCGACCTCGACCGTGATGTCGCACACCTCCTCGGTCCATTCGAG
GGCAGTTTCAATCCGTCACAAGAACCAGCCGTTGCCTGTGCCCTCTTAGT
GGATCATCTCTGCATGCGCCGCAACAAACGATGTCTTCTTGCCTACCACC
GTGTCCGCGCTGAAAAGCTCGAGGAGCTATGCTGGAACGGCGTTGATTTG
CTCGAACAGCAGCTACCGACGGCAGATGAAGGGGCTGCAGGTGCATCAGG
CCAGGGGAACGGGGGATATGCAGCGATGGGCACTGCGAGTGGAAACCACA
GTTCGTTGAGTCCGGAAGAAGAAGAATACTTCCGACAATATAGCGATCTT
CTGGCGGCGTATAAGGGACAGTGGACGGATATTGATCTTACGGGAAGCCT
GGAGCCCCCGAAGGATCTCTTCATAGACGTGAGAGTCTTGAAGGATGCGG
GGGAGATTCAGACTGAGTATGGGGTGATCAATTTGACGAAAAACAGTCAA
CTCTACGTGCGGCAAGGGGATGTGGAACGATTAATCGCGCAGGGGTTTCT
GGAGCGTCTGAGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000811GINS complex
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PSF1M747DRAFT_284338Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_284338-T1M747DRAFT_284338-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_284338-T1.utr5p1M747DRAFT_284338-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_284338-T1.exon1M747DRAFT_284338-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_284338-T1.exon2M747DRAFT_284338-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_284338-T1.exon3M747DRAFT_284338-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_284338-T1.cdsM747DRAFT_284338-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_284338-T1.utr3p1M747DRAFT_284338-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092648K5
DBxrefInterPro:IPR036224
DBxrefInterPro:IPR005339
DBxrefInterPro:IPR021151
DBxrefPFAM:PF05916
ProductDNA replication protein psf1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851928.1supercontigKZ851928.1:52978..54100 +
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