You are here

Home

M747DRAFT_284422-T1, M747DRAFT_284422-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_284422-T1
Unique NameM747DRAFT_284422-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851928.1:213350..215460-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_284422-T1 ID=M747DRAFT_284422-T1|Name=M747DRAFT_284422-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2111bp|location=Sequence derived from alignment at KZ851928.1:213350..215460- (Aspergillus niger ATCC 13496)
CCGCCAACCAACCTCCATCTCCTCACTCCTCCCACCTTAATCTTGCTGTC
CTGCTTCTAGAGCCCCCCAGTTTAATTTAAAAACCGGCTTTTCCTAGCTC
CACGTATTGTACCTCGCACTGATCCCCATCTCCACCCACTCCAACGCTAC
CGACCCAGCCTTCTCTGCCGGCTCCAGGCGGCAGGCAATCAAACCAACCC
CTCGATGGATCAGCACGACGACTTCGACAGCGTCTCGTGGAGGCATGACC
CGGACAGCGATCTCTCGCGACCCACGACCTCCGGAACAGACACAGAGGAA
CAGGCGCCATACACTCACGATGTCAATGGCAAACGGAGGATGAGCAACGC
TCAAGAAAGCCCTCAGGCTGGACCACTGGCGGATGCCGTCGACCTGGCGG
GCATCGGCGACGGCGTACTAGAGTGTCGGGTAGATTCACCGTTGAAGGAG
AATGATGGAACGAAAGACGCTTATATCTCCTATTTGGTTACAACTACGGT
GGGTTATCTTTACCTTCAGTGATCTCAGATGGAAAAGGCTGTGCGGTTGC
AGTGCATGCTGACTAGAATGATAGACCGATTTCAAGTCCTTCCAGAAACC
CGAGTTCACCGTGCGACGCAGATTCACCGACTTCTACTTCCTATACAAGA
CACTTTATCGCGAATACCCTGCCTGCGCCGTCCCGCCGCTGCCGGATAAG
CATAAGATGGAGTATGTCCGCGGCGATCGGTTCGGACCCGAATTCACTAC
CCGGCGAGCATGGTCTTTACATCGCTTTTTGAAACGGCTTACGCTGCATC
CCGTGCTTCGTCGCGCACCGTTACTGGCCATCTTCCTGGAATCGCCCGAC
TGGAATGCACACATGCGGTTGCGGTCCACGCGCAACTCGACCAGCACCTC
GGACGGCAGCGGGGTCCCTGGGATCTTTGACAACTTTACCGACACCTTTG
TCAACGCTTTCACCAAGGTGCATAAGCCGGATAAGCGGTTTATTGAAGTG
CGGGAGAAGGCCGATAAACTGGACGAGGACCTCAATCATGTGGAGAAGAT
TGTAGCCCGAGTGGCTCGGCGGGAATCGGATCTTGAGGCAGACTATAATG
ACCTGGCTACGCAGTTCCGCAAACTTGTACCCCTGGAACCGGAGGTGGAG
GTGCCCCTACAAGTCTTTGCGGCATCGGTAGAGGAGACGGGGCGCGGGCT
CAAGACGCTCAAGGATCACACTGACCAGAATTATCTGGGGTCGCTGCGGG
ATATGGAGGCGTACATTGTCTCGCTTAAAGCCCTCCTCAAAACGCGCGAG
CAGAAACAGCTCGACTTCGAAGCGCTGGTTGACTATCGAAACAAGGCGGT
GGCGGAGCGGGACTCCCTCGCCTCTAACCCCTCGTCCTACTATGCCTCCA
ACCCGCTGACCTCGTCCCCGGCCTCGTTCATCCGGTCCAAGATGGAGGAC
ATGCGGGGCGTCGACCACGAGCAGTCGCGACGCGAGAGGGTGCGGAAGTT
GGAGCTTCGCATTGACGAGCTCACGCGCGAGGTCGAATCGGCTAAAACGA
CGTCGGAGATGTTCGACGAGGAAGTCGTGCGCGAGGTGGCAGACTTTGAG
CGCATCAAGGCCGTAGAGTTCCGGGATACGCTGGGAGCGTTGGCCGAGAA
GCAGATCGAGTTCTACCAGGGGGTACTGAATACCTGGGAACGATTTGTGG
CTGAGATGGAGGGAGATCTGGAAGAAGAGCATGACCCAGGCACGGAGGCC
AGGTGATACTTTAACTACTACCACCATTACTACACTTAGGTACTACTGAT
TATGACACTGTGATATCGCACTAGCCATGTTGTCGCTTAATGAGGGTTTC
GTTTCTCTTATTATCATTGTGGAAGGAGATTGTTGCTTCTGAATGAATAA
TCATCACGACGTTGCATTTTCTATCTTTCTTTCTTTATTCCCTCCTTTTA
CTCGTCCGGTAGAAATCCATAATCATCCTCATCCTCAGATTACCATAATA
CCCAATTAGTTCCCCACCAACCTCTCCCTAACCCTCTGACTTTCCGCCCA
CTCCAAATCAAGGGGACTCGGATCCCTCTGCGCATTAGGATCCACGACTG
CCGGGTCCAGC
back to top

Coding sequence (CDS) from alignment at KZ851928.1:213350..215460-

>M747DRAFT_284422-T1 ID=M747DRAFT_284422-T1|Name=M747DRAFT_284422-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2952bp|location=Sequence derived from alignment at KZ851928.1:213350..215460- (Aspergillus niger ATCC 13496)
ACCGATTTCAAGTCCTTCCAGAAACCCGAGTTCACCGTGCGACGCAGATT
CACCGACTTCTACTTCCTATACAAGACACTTTATCGCGAATACCCTGCCT
GCGCCGTCCCGCCGCTGCCGGATAAGCATAAGATGGAGTATGTCCGCGGC
GATCGGTTCGGACCCGAATTCACTACCCGGCGAGCATGGTCTTTACATCG
CTTTTTGAAACGGCTTACGCTGCATCCCGTGCTTCGTCGCGCACCGTTAC
TGGCCATCTTCCTGGAATCGCCCGACTGGAATGCACACATGCGGTTGCGG
TCCACGCGCAACTCGACCAGCACCTCGGACGGCAGCGGGGTCCCTGGGAT
CTTTGACAACTTTACCGACACCTTTGTCAACGCTTTCACCAAGGTGCATA
AGCCGGATAAGCGGTTTATTGAAGTGCGGGAGAAGGCCGATAAACTGGAC
GAGGACCTCAATCATGTGGAGAAGATTGTAGCCCGAGTGGCTCGGCGGGA
ATCGGATCTTGAGGCAGACTATAATGACCTGGCTACGCAGTTCCGCAAAC
TTGTACCCCTGGAACCGGAGGTGGAGGTGCCCCTACAAGTCTTTGCGGCA
TCGGTAGAGGAGACGGGGCGCGGGCTCAAGACGCTCAAGGATCACACTGA
CCAGAATTATCTGGGGTCGCTGCGGGATATGGAGGCGTACATTGTCTCGC
TTAAAGCCCTCCTCAAAACGCGCGAGCAGAAACAGCTCGACTTCGAAGCG
CTGGTTGACTATCGAAACAAGGCGGTGGCGGAGCGGGACTCCCTCGCCTC
TAACCCCTCGTCCTACTATGCCTCCAACCCGCTGACCTCGTCCCCGGCCT
CGTTCATCCGGTCCAAGATGGAGGACATGCGGGGCGTCGACCACGAGCAG
TCGCGACGCGAGAGGGTGCGGAAGTTGGAGCTTCGCATTGACGAGCTCAC
GCGCGAGGTCGAATCGGCTAAAACGACGTCGGAGATGTTCGACGAGGAAG
TCGTGCGCGAGGTGGCAGACTTTGAGCGCATCAAGGCCGTAGAGTTCCGG
GATACGCTGGGAGCGTTGGCCGAGAAGCAGATCGAGTTCTACCAGGGGGT
ACTGAATACCTGGGAACGATTTGTGGCTGAGATGGAGGGAGATCTGGAAG
AAGAGCATGACCCAGGCACGGAGGCCAGGTGAATGGATCAGCACGACGAC
TTCGACAGCGTCTCGTGGAGGCATGACCCGGACAGCGATCTCTCGCGACC
CACGACCTCCGGAACAGACACAGAGGAACAGGCGCCATACACTCACGATG
TCAATGGCAAACGGAGGATGAGCAACGCTCAAGAAAGCCCTCAGGCTGGA
CCACTGGCGGATGCCGTCGACCTGGCGGGCATCGGCGACGGCGTACTAGA
GTGTCGGGTAGATTCACCGTTGAAGGAGAATGATGGAACGAAAGACGCTT
ATATCTCCTATTTGGTTACAACTACGACCGATTTCAAGTCCTTCCAGAAA
CCCGAGTTCACCGTGCGACGCAGATTCACCGACTTCTACTTCCTATACAA
GACACTTTATCGCGAATACCCTGCCTGCGCCGTCCCGCCGCTGCCGGATA
AGCATAAGATGGAGTATGTCCGCGGCGATCGGTTCGGACCCGAATTCACT
ACCCGGCGAGCATGGTCTTTACATCGCTTTTTGAAACGGCTTACGCTGCA
TCCCGTGCTTCGTCGCGCACCGTTACTGGCCATCTTCCTGGAATCGCCCG
ACTGGAATGCACACATGCGGTTGCGGTCCACGCGCAACTCGACCAGCACC
TCGGACGGCAGCGGGGTCCCTGGGATCTTTGACAACTTTACCGACACCTT
TGTCAACGCTTTCACCAAGGTGCATAAGCCGGATAAGCGGTTTATTGAAG
TGCGGGAGAAGGCCGATAAACTGGACGAGGACCTCAATCATGTGGAGAAG
ATTGTAGCCCGAGTGGCTCGGCGGGAATCGGATCTTGAGGCAGACTATAA
TGACCTGGCTACGCAGTTCCGCAAACTTGTACCCCTGGAACCGGAGGTGG
AGGTGCCCCTACAAGTCTTTGCGGCATCGGTAGAGGAGACGGGGCGCGGG
CTCAAGACGCTCAAGGATCACACTGACCAGAATTATCTGGGGTCGCTGCG
GGATATGGAGGCGTACATTGTCTCGCTTAAAGCCCTCCTCAAAACGCGCG
AGCAGAAACAGCTCGACTTCGAAGCGCTGGTTGACTATCGAAACAAGGCG
GTGGCGGAGCGGGACTCCCTCGCCTCTAACCCCTCGTCCTACTATGCCTC
CAACCCGCTGACCTCGTCCCCGGCCTCGTTCATCCGGTCCAAGATGGAGG
ACATGCGGGGCGTCGACCACGAGCAGTCGCGACGCGAGAGGGTGCGGAAG
TTGGAGCTTCGCATTGACGAGCTCACGCGCGAGGTCGAATCGGCTAAAAC
GACGTCGGAGATGTTCGACGAGGAAGTCGTGCGCGAGGTGGCAGACTTTG
AGCGCATCAAGGCCGTAGAGTTCCGGGATACGCTGGGAGCGTTGGCCGAG
AAGCAGATCGAGTTCTACCAGGGGGTACTGAATACCTGGGAACGATTTGT
GGCTGAGATGGAGGGAGATCTGGAAGAAGAGCATGACCCAGGCACGGAGG
CCAGGTGAATGGATCAGCACGACGACTTCGACAGCGTCTCGTGGAGGCAT
GACCCGGACAGCGATCTCTCGCGACCCACGACCTCCGGAACAGACACAGA
GGAACAGGCGCCATACACTCACGATGTCAATGGCAAACGGAGGATGAGCA
ACGCTCAAGAAAGCCCTCAGGCTGGACCACTGGCGGATGCCGTCGACCTG
GCGGGCATCGGCGACGGCGTACTAGAGTGTCGGGTAGATTCACCGTTGAA
GGAGAATGATGGAACGAAAGACGCTTATATCTCCTATTTGGTTACAACTA
CG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0035091phosphatidylinositol binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SNX4M747DRAFT_284422Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_284422-T1M747DRAFT_284422-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_284422-T1.cdsM747DRAFT_284422-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_284422-T1.utr3p1M747DRAFT_284422-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_284422-T1.exon2M747DRAFT_284422-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_284422-T1.exon1M747DRAFT_284422-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_284422-T1.utr5p1M747DRAFT_284422-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09261PNZ
DBxrefInterPro:IPR027267
DBxrefInterPro:IPR036871
DBxrefInterPro:IPR015404
DBxrefInterPro:IPR001683
DBxrefPFAM:PF09325
DBxrefPFAM:PF00787
Productintercellular trafficking and secretion
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851928.1supercontigKZ851928.1:213350..215460 -
Powered by Drupal