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M747DRAFT_285235-T1, M747DRAFT_285235-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_285235-T1
Unique NameM747DRAFT_285235-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851931.1:248267..249488+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_285235-T1 ID=M747DRAFT_285235-T1|Name=M747DRAFT_285235-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1222bp|location=Sequence derived from alignment at KZ851931.1:248267..249488+ (Aspergillus niger ATCC 13496)
AAATAATCCCTCGCATTAATCCCTCCTCCATAGCCCAAGGCAGGGGCCCG
GACTCGCCTAGATCGATCCTACACTTTTCTCCGTCTTGTATAGCGAACTG
AGTACATAATCGCGTTATCAAACCATCATGGCCGCCTCCTCATCGAAGCC
ATCGAGCTTCCTGCTCTAGTACGTGATTCAAACAGCAGCTGGACAGCAGC
ACACCGCGACATCTATCTTCTCCCTCAAATAGCATCTCCAACTAATCACT
CACCCATATCTACAGTTCCTGCATCGCCCACCGCACAACCATTCTCGCCG
AACACTCCTCCCCAGGCACATCCTCGACCGCCGCCTCGTCCCTGGCCTCT
ATCATCCTCCCAAAGATCAGCCACGACCAACCGCAAAAGCTCACCTACAC
CCACGAGCGTCTCTTCGTACACTACATCGCCGACTCGCCCACAACACCCA
GCACCTCCGACGACCCCCGTCAGGGCGAACCCAACTCCTATGCGCCCCTC
AGCTACATCGTCGTCGCAACCGCCGAACAAGGCCGCCGCATTCCCTTCGC
CTTCCTCCTCGAAATCAAGCGCAAGTTCCTCTCTACTTACTCACCTTCCA
GCACGGACTTCTCTGCTCTCCCGGCTTACGGCTGCGCCGCGTTCAACAAT
GAGCTCCGCTCGCTGCTGCAAACGTACAATACGGCCCCGCCGGCGGATTC
GCTGGCCTCGGCAAGACGGGAAATCGATAGCGTGCGGAACATCATGACGG
AGAATATTGAAAGAGTGTTGGAGAGGGGAGAGCGGATTGATCTCCTGGTG
GATAAGACGGATCGGTTGGGTGGGAGTGCGCATGATTTTCGCATTAGGAG
TCGTGGCTTGAGGAGACGTATGTGGTGGAAGAATATCAAGTTGATGGTTT
TGTTGGCGGTTGTGGTTGTGTTCTTGGTGTATTTGTTTGTGGGGATGGGG
TGCGGGTTGCCCGCTTGGGGGAGGTGTGTTGGGCAGAGTCAGTAAGAGGT
GGTGGAAATATGGTTTGATGCGATGCGATGGTGTATCTTATTCTTTCTTC
GTGGTGATTATGAGGTGGAGGAACGGCTTACGATTGTCTGGTTTTCGGCC
AATTGAGCGGGACATATGCCTTTCTGTTTGTTTGTATGATATGATGACTG
CGGCTGGTATTCATACTTTTAGGTATCTATATTTACTCCTGGGGTATCCC
AATGTGATAACGTCTAGCGTGT
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Coding sequence (CDS) from alignment at KZ851931.1:248267..249488+

>M747DRAFT_285235-T1 ID=M747DRAFT_285235-T1|Name=M747DRAFT_285235-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1542bp|location=Sequence derived from alignment at KZ851931.1:248267..249488+ (Aspergillus niger ATCC 13496)
ATGGCCGCCTCCTCATCGAAGCCATCGAGCTTCCTGCTCTATTCCTGCAT
CGCCCACCGCACAACCATTCTCGCCGAACACTCCTCCCCAGGCACATCCT
CGACCGCCGCCTCGTCCCTGGCCTCTATCATCCTCCCAAAGATCAGCCAC
GACCAACCGCAAAAGCTCACCTACACCCACGAGCGTCTCTTCGTACACTA
CATCGCCGACTCGCCCACAACACCCAGCACCTCCGACGACCCCCGTCAGG
GCGAACCCAACTCCTATGCGCCCCTCAGCTACATCGTCGTCGCAACCGCC
GAACAAGGCCGCCGCATTCCCTTCGCCTTCCTCCTCGAAATCAAGCGCAA
GTTCCTCTCTACTTACTCACCTTCCAGCACGGACTTCTCTGCTCTCCCGG
CTTACGGCTGCGCCGCGTTCAACAATGAGCTCCGCTCGCTGCTGCAAACG
TACAATACGGCCCCGCCGGCGGATTCGCTGGCCTCGGCAAGACGGGAAAT
CGATAGCGTGCGGAACATCATGACGGAGAATATTGAAAGAGTGTTGGAGA
GGGGAGAGCGGATTGATCTCCTGGTGGATAAGACGGATCGGTTGGGTGGG
AGTGCGCATGATTTTCGCATTAGGAGTCGTGGCTTGAGGAGACGTATGTG
GTGGAAGAATATCAAGTTGATGGTTTTGTTGGCGGTTGTGGTTGTGTTCT
TGGTGTATTTGTTTGTGGGGATGGGGTGCGGGTTGCCCGCTTGGGGGAGG
TGTGTTGGGCAGAGTCAGTAAATGGCCGCCTCCTCATCGAAGCCATCGAG
CTTCCTGCTCTATTCCTGCATCGCCCACCGCACAACCATTCTCGCCGAAC
ACTCCTCCCCAGGCACATCCTCGACCGCCGCCTCGTCCCTGGCCTCTATC
ATCCTCCCAAAGATCAGCCACGACCAACCGCAAAAGCTCACCTACACCCA
CGAGCGTCTCTTCGTACACTACATCGCCGACTCGCCCACAACACCCAGCA
CCTCCGACGACCCCCGTCAGGGCGAACCCAACTCCTATGCGCCCCTCAGC
TACATCGTCGTCGCAACCGCCGAACAAGGCCGCCGCATTCCCTTCGCCTT
CCTCCTCGAAATCAAGCGCAAGTTCCTCTCTACTTACTCACCTTCCAGCA
CGGACTTCTCTGCTCTCCCGGCTTACGGCTGCGCCGCGTTCAACAATGAG
CTCCGCTCGCTGCTGCAAACGTACAATACGGCCCCGCCGGCGGATTCGCT
GGCCTCGGCAAGACGGGAAATCGATAGCGTGCGGAACATCATGACGGAGA
ATATTGAAAGAGTGTTGGAGAGGGGAGAGCGGATTGATCTCCTGGTGGAT
AAGACGGATCGGTTGGGTGGGAGTGCGCATGATTTTCGCATTAGGAGTCG
TGGCTTGAGGAGACGTATGTGGTGGAAGAATATCAAGTTGATGGTTTTGT
TGGCGGTTGTGGTTGTGTTCTTGGTGTATTTGTTTGTGGGGATGGGGTGC
GGGTTGCCCGCTTGGGGGAGGTGTGTTGGGCAGAGTCAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_285235M747DRAFT_285235Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_285235-T1.utr5p1M747DRAFT_285235-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_285235-T1.exon1M747DRAFT_285235-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_285235-T1.exon2M747DRAFT_285235-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_285235-T1.cdsM747DRAFT_285235-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_285235-T1.utr3p1M747DRAFT_285235-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_285235-T1M747DRAFT_285235-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011012
DBxrefInterPro:IPR010908
DBxrefInterPro:IPR001388
DBxrefPFAM:PF00957
DBxrefPFAM:PF13774
Productsynaptobrevin-like protein Sybl1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851931.1supercontigKZ851931.1:248267..249488 +
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