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M747DRAFT_290634-T1, M747DRAFT_290634-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_290634-T1
Unique NameM747DRAFT_290634-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851968.1:40565..41751-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_290634-T1 ID=M747DRAFT_290634-T1|Name=M747DRAFT_290634-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1187bp|location=Sequence derived from alignment at KZ851968.1:40565..41751- (Aspergillus niger ATCC 13496)
TCTCTCTTCCCTCTCTATACACCTCTCACTCCAGGCCCTCTGGGTATCTG
ATTCATCTACAACCTCTCCCGACCCCGTTTCTAGGACCTATACTGTCCCA
CCCGAGAATGAGCCGGAAGCTCGCCCCCGAAGCCAATCGGTAAGTTCTGC
TCGCCGAATCTTGCCCCTCTTCGGTCGCCCGCCATCTTTCAATTCCAGGC
ATTTGTTCGGCACGTTGTTGGCTGGCAAACCTACGAGCCGGGCAAGTATC
ATATCTAAAGCATCGATGCTGACCGGTTTCAGGATTCTCTTTGTAAAGAA
CCTCAAGTACGTCGATGATTTCCCAAGATTCGTTCCTCGACTCGCAAACC
ATCCGTCGCATACCTGTCGACCAACAGCCAGCAGGCGACAGGCGCCCATC
GTCTTCCAGAATGCAAGAGCTAACCTGATTGTTTCCTTACAGCTACAACG
TCACAGCTGAGCAACTCTTTGACCTCTTCGGCAAATTTGGTCCCATCCGG
TAAATCTGCGCATGACTCACGTTCAACCCACTTCTTGGTCAATAATGGCT
AATTGTTCCTGTTTCTTCCAGCCAAATACGTCAGGGAATCGCCAACAACT
CGAAGGGCACAGCCTTTGTGGTTTACGAAGACGTTCATGACGCCAAACAG
GCATGCGATAAGCTCAATGGGTTCAACTTCCAGAACAGATACCTCGTCGG
TATGTAACCCCGTGTCAAGGGGAGACGAAGCAGAGAATATATGGAGACAA
GCCGATTGGCTGACATTCGTTTCTTTCTAGTTCTATATCACCAGCCTGAG
AAAATGCTTAGGTCGAAAGAGGACTTGGCGGAAAGGCAAGAGAATTTGGA
GCGTCTCAAACAGCAACATGGGATAGAATGACGTGATGATTGCTTTTGTT
CGCTTTCTCTGCATGCCCTTTGCCGGCATCTGGCTGCGTATTATCCTGGG
TTGGTCGTGGGGTTTCTGGCGTTTTTCTCTCCTATGGGTTTGATGGCTCT
TATTCATTCATGGGTATGAAAGGGTTGCCGGCGGGTTGAATGACACCCTG
GCTTTTTGTTCAGGAGAATGATACAGAATGGGTTATTTCAAGCCGGGGTC
GGTGCTTGTTGCACCGGCTCCAAGGTTACCAATATAATCATTTCGATCGC
CGGCCACCTTTTGGCTGTTGCGGCACCCCCCTCTGAG
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Coding sequence (CDS) from alignment at KZ851968.1:40565..41751-

>M747DRAFT_290634-T1 ID=M747DRAFT_290634-T1|Name=M747DRAFT_290634-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1710bp|location=Sequence derived from alignment at KZ851968.1:40565..41751- (Aspergillus niger ATCC 13496)
TTCTATATCACCAGCCTGAGAAAATGCTTAGGTCGAAAGAGGACTTGGCG
GAAAGGCAAGAGAATTTGGAGCGTCTCAAACAGCAACATGGGATAGAATG
ACCAAATACGTCAGGGAATCGCCAACAACTCGAAGGGCACAGCCTTTGTG
GTTTACGAAGACGTTCATGACGCCAAACAGGCATGCGATAAGCTCAATGG
GTTCAACTTCCAGAACAGATACCTCGTCGCTACAACGTCACAGCTGAGCA
ACTCTTTGACCTCTTCGGCAAATTTGGTCCCATCCGGATTCTCTTTGTAA
AGAACCTCAAATGAGCCGGAAGCTCGCCCCCGAAGCCAATCGTTCTATAT
CACCAGCCTGAGAAAATGCTTAGGTCGAAAGAGGACTTGGCGGAAAGGCA
AGAGAATTTGGAGCGTCTCAAACAGCAACATGGGATAGAATGACCAAATA
CGTCAGGGAATCGCCAACAACTCGAAGGGCACAGCCTTTGTGGTTTACGA
AGACGTTCATGACGCCAAACAGGCATGCGATAAGCTCAATGGGTTCAACT
TCCAGAACAGATACCTCGTCGCTACAACGTCACAGCTGAGCAACTCTTTG
ACCTCTTCGGCAAATTTGGTCCCATCCGGATTCTCTTTGTAAAGAACCTC
AAATGAGCCGGAAGCTCGCCCCCGAAGCCAATCGTTCTATATCACCAGCC
TGAGAAAATGCTTAGGTCGAAAGAGGACTTGGCGGAAAGGCAAGAGAATT
TGGAGCGTCTCAAACAGCAACATGGGATAGAATGACCAAATACGTCAGGG
AATCGCCAACAACTCGAAGGGCACAGCCTTTGTGGTTTACGAAGACGTTC
ATGACGCCAAACAGGCATGCGATAAGCTCAATGGGTTCAACTTCCAGAAC
AGATACCTCGTCGCTACAACGTCACAGCTGAGCAACTCTTTGACCTCTTC
GGCAAATTTGGTCCCATCCGGATTCTCTTTGTAAAGAACCTCAAATGAGC
CGGAAGCTCGCCCCCGAAGCCAATCGTTCTATATCACCAGCCTGAGAAAA
TGCTTAGGTCGAAAGAGGACTTGGCGGAAAGGCAAGAGAATTTGGAGCGT
CTCAAACAGCAACATGGGATAGAATGACCAAATACGTCAGGGAATCGCCA
ACAACTCGAAGGGCACAGCCTTTGTGGTTTACGAAGACGTTCATGACGCC
AAACAGGCATGCGATAAGCTCAATGGGTTCAACTTCCAGAACAGATACCT
CGTCGCTACAACGTCACAGCTGAGCAACTCTTTGACCTCTTCGGCAAATT
TGGTCCCATCCGGATTCTCTTTGTAAAGAACCTCAAATGAGCCGGAAGCT
CGCCCCCGAAGCCAATCGTTCTATATCACCAGCCTGAGAAAATGCTTAGG
TCGAAAGAGGACTTGGCGGAAAGGCAAGAGAATTTGGAGCGTCTCAAACA
GCAACATGGGATAGAATGACCAAATACGTCAGGGAATCGCCAACAACTCG
AAGGGCACAGCCTTTGTGGTTTACGAAGACGTTCATGACGCCAAACAGGC
ATGCGATAAGCTCAATGGGTTCAACTTCCAGAACAGATACCTCGTCGCTA
CAACGTCACAGCTGAGCAACTCTTTGACCTCTTCGGCAAATTTGGTCCCA
TCCGGATTCTCTTTGTAAAGAACCTCAAATGAGCCGGAAGCTCGCCCCCG
AAGCCAATCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_290634M747DRAFT_290634Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_290634-T1M747DRAFT_290634-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_290634-T1.cdsM747DRAFT_290634-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_290634-T1.utr3p1M747DRAFT_290634-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_290634-T1.exon5M747DRAFT_290634-T1.exon5Aspergillus niger ATCC 13496exon
M747DRAFT_290634-T1.exon4M747DRAFT_290634-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_290634-T1.exon3M747DRAFT_290634-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_290634-T1.exon2M747DRAFT_290634-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_290634-T1.exon1M747DRAFT_290634-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_290634-T1.utr5p1M747DRAFT_290634-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034150
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF13893
DBxrefPFAM:PF00076
Productputative pre-mRNA branch site protein p14
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851968.1supercontigKZ851968.1:40565..41751 -
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