You are here

Home

M747DRAFT_291323-T1, M747DRAFT_291323-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_291323-T1
Unique NameM747DRAFT_291323-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851899.1:120829..122560-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_291323-T1 ID=M747DRAFT_291323-T1|Name=M747DRAFT_291323-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1732bp|location=Sequence derived from alignment at KZ851899.1:120829..122560- (Aspergillus niger ATCC 13496)
CTCTTTTTCTTCACATCCCACCACCAGCTCAGTCTATAGGAGTGTTTCTG
TGTCTGTGTGATCAATTCCTCTTCTACTTTTATCTCTTTCACTCACACAC
ACCCAACACAATGTCTGTACAACTCACTCCCTCCAAGCAGGTATGTGATG
TCACGTCTCTCGCCTCCCACTTTCGACGCGTAATTAAAGGCAGATAAGCT
AACACGCGTTGCTTCCATAGGCTGCTTCCTCCCTCGAGAACCTCAAGATG
AGCGACTCGCCTGTCAAGAAGCTCAATTTCGGTGGCAAGGAGAACGCGCC
TGCCGCCGTTGACGTGACTGCCGACAAGCCCGTCGAGAAGCCCGTCGAAG
CCCCCAAGGTTGCGCCCGGTATCAAGGAGATGGAGGCCAGCGAGCCTCTG
CTTCAGGAAAATCCCCACCGTTTCGTCCTTTTCCCCATCAAGTACCATGA
GGTGAGTGACACGTCCGTTACGCGTCACGCGTAAAGTGGAATTTTGCGCT
TCCCGCCCCGCAACAATTGGCATGTGCGCTAACGCCGCATTCTCGCACCC
TACAGATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCC
GAGGAAATTGATCTGTCCAAGGATTTGCACGACTGGCACAACCGCCTGAA
CGACGACGAGCGCTACTTCATCTCCCACGTTCTCGCGTTCTTCGCTGCCT
CCGATGGCATTGTCAACGAGAACCTTGTCGAGCGCTTCAGCGGCGAGGTC
CAGGTTCCCGAGGCTCGTTGCTTCTACGGATTCCAGATCATGATGGAGAA
CATCCACTCCGAGACCTACTCTCTCCTGATTGATACCTACATCAAGGAGC
CCAAGCAGCGCACCTACCTCTTCGACGCTATTGATACTAGTATGTACCTC
CAACCGGGGTTGTGATTGGTCAATGGATGCTAACCGCTGCAGTCCCCTGC
ATTGCCAAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGTC
GACCTTCGCTCAGCGTCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCT
TCTCCGGTTCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATG
CCTGGTCTCACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTGCA
CACCGACTTCGCTTGCCTGCTGTTCTCCCACCTGAACAACCGCCCCAGCA
AACAGGTTGTTGAAGACATCATCGTCGAGGCCGTCGGCATTGAGCAGGAG
TTCCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCT
GATGTGTCAGTACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGCCCTCG
GCAACAAGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGTCG
ATCTCGCTGGCGGGTAAGACCAACTTCTTCGAGAAGCGGGTAGGTGACTA
CCAGAAGGCTGGTGTCATGGCCAGCACGAAGAAGGAAGAGGAGGTCAAGA
CCAACAGCAACGGCCTCAGCTTCGATGAAGACTTCTAAACACCGAAAAAA
TGATGCCACTATACCCGGTTGTTGGCACCAGCCACGATATGTTTGATTCT
GGGTGTTTACGAGGATATTTGATTATACGCATGGGATTGGCGTTCATTGG
ATGGGATTGATTCTTTTCCTTTTTCTTATAATGTTAATGCTTGACTCTTG
TATTTAGAGAAATGTACATTGGATATTTTCTA
back to top

Coding sequence (CDS) from alignment at KZ851899.1:120829..122560-

>M747DRAFT_291323-T1 ID=M747DRAFT_291323-T1|Name=M747DRAFT_291323-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4764bp|location=Sequence derived from alignment at KZ851899.1:120829..122560- (Aspergillus niger ATCC 13496)
TCCCCTGCATTGCCAAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGAC
AGGGAGTCGACCTTCGCTCAGCGTCTCGTTGCTTTCGCTGCCGTTGAGGG
TATCTTCTTCTCCGGTTCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTG
GTCTCATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCTCGTGACGAG
GGTCTGCACACCGACTTCGCTTGCCTGCTGTTCTCCCACCTGAACAACCG
CCCCAGCAAACAGGTTGTTGAAGACATCATCGTCGAGGCCGTCGGCATTG
AGCAGGAGTTCCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAAC
TCCAAGCTGATGTGTCAGTACATCGAGTTTGTCGCGGACCGCCTGCTGGT
GGCCCTCGGCAACAAGAAGTACTACAACGCCACCAACCCCTTCGACTTCA
TGGAGTCGATCTCGCTGGCGGGTAAGACCAACTTCTTCGAGAAGCGGGTA
GGTGACTACCAGAAGGCTGGTGTCATGGCCAGCACGAAGAAGGAAGAGGA
GGTCAAGACCAACAGCAACGGCCTCAGCTTCGATGAAGACTTCTAAATCT
GGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAAATT
GATCTGTCCAAGGATTTGCACGACTGGCACAACCGCCTGAACGACGACGA
GCGCTACTTCATCTCCCACGTTCTCGCGTTCTTCGCTGCCTCCGATGGCA
TTGTCAACGAGAACCTTGTCGAGCGCTTCAGCGGCGAGGTCCAGGTTCCC
GAGGCTCGTTGCTTCTACGGATTCCAGATCATGATGGAGAACATCCACTC
CGAGACCTACTCTCTCCTGATTGATACCTACATCAAGGAGCCCAAGCAGC
GCACCTACCTCTTCGACGCTATTGATACTAGCTGCTTCCTCCCTCGAGAA
CCTCAAGATGAGCGACTCGCCTGTCAAGAAGCTCAATTTCGGTGGCAAGG
AGAACGCGCCTGCCGCCGTTGACGTGACTGCCGACAAGCCCGTCGAGAAG
CCCGTCGAAGCCCCCAAGGTTGCGCCCGGTATCAAGGAGATGGAGGCCAG
CGAGCCTCTGCTTCAGGAAAATCCCCACCGTTTCGTCCTTTTCCCCATCA
AGTACCATGAGATGTCTGTACAACTCACTCCCTCCAAGCAGTCCCCTGCA
TTGCCAAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGTCG
ACCTTCGCTCAGCGTCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTT
CTCCGGTTCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGC
CTGGTCTCACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTGCAC
ACCGACTTCGCTTGCCTGCTGTTCTCCCACCTGAACAACCGCCCCAGCAA
ACAGGTTGTTGAAGACATCATCGTCGAGGCCGTCGGCATTGAGCAGGAGT
TCCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTG
ATGTGTCAGTACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGCCCTCGG
CAACAAGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGTCGA
TCTCGCTGGCGGGTAAGACCAACTTCTTCGAGAAGCGGGTAGGTGACTAC
CAGAAGGCTGGTGTCATGGCCAGCACGAAGAAGGAAGAGGAGGTCAAGAC
CAACAGCAACGGCCTCAGCTTCGATGAAGACTTCTAAATCTGGCAGATGT
ACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAAATTGATCTGTCC
AAGGATTTGCACGACTGGCACAACCGCCTGAACGACGACGAGCGCTACTT
CATCTCCCACGTTCTCGCGTTCTTCGCTGCCTCCGATGGCATTGTCAACG
AGAACCTTGTCGAGCGCTTCAGCGGCGAGGTCCAGGTTCCCGAGGCTCGT
TGCTTCTACGGATTCCAGATCATGATGGAGAACATCCACTCCGAGACCTA
CTCTCTCCTGATTGATACCTACATCAAGGAGCCCAAGCAGCGCACCTACC
TCTTCGACGCTATTGATACTAGCTGCTTCCTCCCTCGAGAACCTCAAGAT
GAGCGACTCGCCTGTCAAGAAGCTCAATTTCGGTGGCAAGGAGAACGCGC
CTGCCGCCGTTGACGTGACTGCCGACAAGCCCGTCGAGAAGCCCGTCGAA
GCCCCCAAGGTTGCGCCCGGTATCAAGGAGATGGAGGCCAGCGAGCCTCT
GCTTCAGGAAAATCCCCACCGTTTCGTCCTTTTCCCCATCAAGTACCATG
AGATGTCTGTACAACTCACTCCCTCCAAGCAGTCCCCTGCATTGCCAAGA
AGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGTCGACCTTCGCT
CAGCGTCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGTTC
CTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCA
CCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTC
GCTTGCCTGCTGTTCTCCCACCTGAACAACCGCCCCAGCAAACAGGTTGT
TGAAGACATCATCGTCGAGGCCGTCGGCATTGAGCAGGAGTTCCTGACTG
ACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGATGTGTCAG
TACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGCCCTCGGCAACAAGAA
GTACTACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGG
CGGGTAAGACCAACTTCTTCGAGAAGCGGGTAGGTGACTACCAGAAGGCT
GGTGTCATGGCCAGCACGAAGAAGGAAGAGGAGGTCAAGACCAACAGCAA
CGGCCTCAGCTTCGATGAAGACTTCTAAATCTGGCAGATGTACAAGAAGG
CCGAGGCCTCTTTCTGGACCGCCGAGGAAATTGATCTGTCCAAGGATTTG
CACGACTGGCACAACCGCCTGAACGACGACGAGCGCTACTTCATCTCCCA
CGTTCTCGCGTTCTTCGCTGCCTCCGATGGCATTGTCAACGAGAACCTTG
TCGAGCGCTTCAGCGGCGAGGTCCAGGTTCCCGAGGCTCGTTGCTTCTAC
GGATTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCTCTCCT
GATTGATACCTACATCAAGGAGCCCAAGCAGCGCACCTACCTCTTCGACG
CTATTGATACTAGCTGCTTCCTCCCTCGAGAACCTCAAGATGAGCGACTC
GCCTGTCAAGAAGCTCAATTTCGGTGGCAAGGAGAACGCGCCTGCCGCCG
TTGACGTGACTGCCGACAAGCCCGTCGAGAAGCCCGTCGAAGCCCCCAAG
GTTGCGCCCGGTATCAAGGAGATGGAGGCCAGCGAGCCTCTGCTTCAGGA
AAATCCCCACCGTTTCGTCCTTTTCCCCATCAAGTACCATGAGATGTCTG
TACAACTCACTCCCTCCAAGCAGTCCCCTGCATTGCCAAGAAGGCCGATT
GGGCCATTAAGTGGATCCAGGACAGGGAGTCGACCTTCGCTCAGCGTCTC
GTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTCGCTTC
CATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCCA
ACGAGCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTCGCTTGCCTG
CTGTTCTCCCACCTGAACAACCGCCCCAGCAAACAGGTTGTTGAAGACAT
CATCGTCGAGGCCGTCGGCATTGAGCAGGAGTTCCTGACTGACGCTCTGC
CCGTTGCTCTGCTGGGCATGAACTCCAAGCTGATGTGTCAGTACATCGAG
TTTGTCGCGGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACTACAA
CGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGA
CCAACTTCTTCGAGAAGCGGGTAGGTGACTACCAGAAGGCTGGTGTCATG
GCCAGCACGAAGAAGGAAGAGGAGGTCAAGACCAACAGCAACGGCCTCAG
CTTCGATGAAGACTTCTAAATCTGGCAGATGTACAAGAAGGCCGAGGCCT
CTTTCTGGACCGCCGAGGAAATTGATCTGTCCAAGGATTTGCACGACTGG
CACAACCGCCTGAACGACGACGAGCGCTACTTCATCTCCCACGTTCTCGC
GTTCTTCGCTGCCTCCGATGGCATTGTCAACGAGAACCTTGTCGAGCGCT
TCAGCGGCGAGGTCCAGGTTCCCGAGGCTCGTTGCTTCTACGGATTCCAG
ATCATGATGGAGAACATCCACTCCGAGACCTACTCTCTCCTGATTGATAC
CTACATCAAGGAGCCCAAGCAGCGCACCTACCTCTTCGACGCTATTGATA
CTAGCTGCTTCCTCCCTCGAGAACCTCAAGATGAGCGACTCGCCTGTCAA
GAAGCTCAATTTCGGTGGCAAGGAGAACGCGCCTGCCGCCGTTGACGTGA
CTGCCGACAAGCCCGTCGAGAAGCCCGTCGAAGCCCCCAAGGTTGCGCCC
GGTATCAAGGAGATGGAGGCCAGCGAGCCTCTGCTTCAGGAAAATCCCCA
CCGTTTCGTCCTTTTCCCCATCAAGTACCATGAGATGTCTGTACAACTCA
CTCCCTCCAAGCAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005971ribonucleoside-diphosphate reductase complex
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0005515protein binding
GO:0004748ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0009263deoxyribonucleotide biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RNR2M747DRAFT_291323Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291323-T1M747DRAFT_291323-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291323-T1.cdsM747DRAFT_291323-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291323-T1.utr3p1M747DRAFT_291323-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291323-T1.exon4M747DRAFT_291323-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_291323-T1.exon3M747DRAFT_291323-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_291323-T1.exon2M747DRAFT_291323-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_291323-T1.exon1M747DRAFT_291323-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291323-T1.utr5p1M747DRAFT_291323-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR009078
DBxrefInterPro:IPR033909
DBxrefInterPro:IPR030475
DBxrefInterPro:IPR012348
DBxrefInterPro:IPR000358
DBxrefPFAM:PF00268
Product small subunit
ProductRibonucleotide-diphosphate reductase (RNR)
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851899.1supercontigKZ851899.1:120829..122560 -
Powered by Drupal