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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851899.1:1154199..1155375+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_291625-T1 ID=M747DRAFT_291625-T1|Name=M747DRAFT_291625-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1177bp|location=Sequence derived from alignment at KZ851899.1:1154199..1155375+ (Aspergillus niger ATCC 13496)
GCTCCGTCTTCAATCTCATCATCCCCGCTACTTCAATTGGCCTTTCTCCT
CGATCTACTATTTGCTCTACATCAGTCGCTTCGCGCAGCTTCCTTTTCTT
TCGTGCATGATACCCCAATAGAACCCGTTATCGATCCCGCCCGCCACCAT
GCGATTGACCGTTGAACTGATCCAAAATTCCCTGTCCTACATTAACCCGC
TCAAAGACCGCGAGCTAGATCTTCGAGGTGCGTTCCAGCCACCAGTCCTG
AAAAGAACAGATACTACACTTTTGAGATGAGCTTGATTGATATCGGTTTT
GTGTTTGAGTCGTATAGGGCACAAGATACCCGCTATTGAGAACTTGGGTA
TTGCCAAGGTAACCTCTTCCCACCACCTCATTTCTCTCTTGGAATGTCTT
CGCGGCATTGTATATGGTATAGAGGCTAAGAAAGGAACGGTAGGACCAAG
ATGCAATCGACCTAACAGACAACGATATCACCTCCCTCGGAAACTTTCCC
TTCTTTCCTCGCCTCCGCACCCTCCTCCTCGCGCGTAACCGAGTCAAGCA
GATCCAGCCGACGATATCGACCTCGGTGCCGAATCTGAGCGCGCTGGTGT
TGACGGCGAATAACATGAACGAGTTGGCGGATTTGGACCCGCTTAGAAAT
CTGGCCCAGTTGACGCATTTGGTGTTGCTGGAGAATCCTGTTACCAGGAA
GGAGGTAAGCTTCCCCTTTTCTTCTATTTCCTTTCCTAGCGAGATCAAAG
CAAAGCAAAGTCTAACATAAATGGTATTGGTGTAGCACTATCGCTACTAC
GTCATCTGGCGCATCCCCAGCGTCCGCTTCCTCGACTACCAGAAAGTGAA
GGACGCGGAGCGCGAAAAAGCCACCGAGTTGTTCGGCACAGCTGAGGAGC
CGTCTGCGCTGGCGTCTAAGATCATGGGAATCAAGTCTCGCACGTTTGAT
GTGCCCTCGGGCGCAGGGGGTGCGGATCGTGGTGCGCCCGCGGATAAGGC
GGTGCGGGTGAAGTTGACGGAGAAGGAGAGGAAGAGGGTGGAGAAGATGA
TTCGCGAGGCGAAGAGTTTGCAGGAGATTTCGCGGTTGGAGAAGGAGTTG
AATGAGGGGAGGATACCTGGAGGTGCATTGGATTATGCTGATAGTGATGA
GGAGATGCAGACATAGTAGTAGATGGG back to topCoding sequence (CDS) from alignment at KZ851899.1:1154199..1155375+ >M747DRAFT_291625-T1 ID=M747DRAFT_291625-T1|Name=M747DRAFT_291625-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3048bp|location=Sequence derived from alignment at KZ851899.1:1154199..1155375+ (Aspergillus niger ATCC 13496)
ATGCGATTGACCGTTGAACTGATCCAAAATTCCCTGTCCTACATTAACCC
GCTCAAAGACCGCGAGCTAGATCTTCGAGGGCACAAGATACCCGCTATTG
AGAACTTGGGTATTGCCAAGGACCAAGATGCAATCGACCTAACAGACAAC
GATATCACCTCCCTCGGAAACTTTCCCTTCTTTCCTCGCCTCCGCACCCT
CCTCCTCGCGCGTAACCGAGTCAAGCAGATCCAGCCGACGATATCGACCT
CGGTGCCGAATCTGAGCGCGCTGGTGTTGACGGCGAATAACATGAACGAG
TTGGCGGATTTGGACCCGCTTAGAAATCTGGCCCAGTTGACGCATTTGGT
GTTGCTGGAGAATCCTGTTACCAGGAAGGAGCACTATCGCTACTACGTCA
TCTGGCGCATCCCCAGCGTCCGCTTCCTCGACTACCAGAAAGTGAAGGAC
GCGGAGCGCGAAAAAGCCACCGAGTTGTTCGGCACAGCTGAGGAGCCGTC
TGCGCTGGCGTCTAAGATCATGGGAATCAAGTCTCGCACGTTTGATGTGC
CCTCGGGCGCAGGGGGTGCGGATCGTGGTGCGCCCGCGGATAAGGCGGTG
CGGGTGAAGTTGACGGAGAAGGAGAGGAAGAGGGTGGAGAAGATGATTCG
CGAGGCGAAGAGTTTGCAGGAGATTTCGCGGTTGGAGAAGGAGTTGAATG
AGGGGAGGATACCTGGAGGTGCATTGGATTATGCTGATAGTGATGAGGAG
ATGCAGACATAGATGCGATTGACCGTTGAACTGATCCAAAATTCCCTGTC
CTACATTAACCCGCTCAAAGACCGCGAGCTAGATCTTCGAGGGCACAAGA
TACCCGCTATTGAGAACTTGGGTATTGCCAAGGACCAAGATGCAATCGAC
CTAACAGACAACGATATCACCTCCCTCGGAAACTTTCCCTTCTTTCCTCG
CCTCCGCACCCTCCTCCTCGCGCGTAACCGAGTCAAGCAGATCCAGCCGA
CGATATCGACCTCGGTGCCGAATCTGAGCGCGCTGGTGTTGACGGCGAAT
AACATGAACGAGTTGGCGGATTTGGACCCGCTTAGAAATCTGGCCCAGTT
GACGCATTTGGTGTTGCTGGAGAATCCTGTTACCAGGAAGGAGCACTATC
GCTACTACGTCATCTGGCGCATCCCCAGCGTCCGCTTCCTCGACTACCAG
AAAGTGAAGGACGCGGAGCGCGAAAAAGCCACCGAGTTGTTCGGCACAGC
TGAGGAGCCGTCTGCGCTGGCGTCTAAGATCATGGGAATCAAGTCTCGCA
CGTTTGATGTGCCCTCGGGCGCAGGGGGTGCGGATCGTGGTGCGCCCGCG
GATAAGGCGGTGCGGGTGAAGTTGACGGAGAAGGAGAGGAAGAGGGTGGA
GAAGATGATTCGCGAGGCGAAGAGTTTGCAGGAGATTTCGCGGTTGGAGA
AGGAGTTGAATGAGGGGAGGATACCTGGAGGTGCATTGGATTATGCTGAT
AGTGATGAGGAGATGCAGACATAGATGCGATTGACCGTTGAACTGATCCA
AAATTCCCTGTCCTACATTAACCCGCTCAAAGACCGCGAGCTAGATCTTC
GAGGGCACAAGATACCCGCTATTGAGAACTTGGGTATTGCCAAGGACCAA
GATGCAATCGACCTAACAGACAACGATATCACCTCCCTCGGAAACTTTCC
CTTCTTTCCTCGCCTCCGCACCCTCCTCCTCGCGCGTAACCGAGTCAAGC
AGATCCAGCCGACGATATCGACCTCGGTGCCGAATCTGAGCGCGCTGGTG
TTGACGGCGAATAACATGAACGAGTTGGCGGATTTGGACCCGCTTAGAAA
TCTGGCCCAGTTGACGCATTTGGTGTTGCTGGAGAATCCTGTTACCAGGA
AGGAGCACTATCGCTACTACGTCATCTGGCGCATCCCCAGCGTCCGCTTC
CTCGACTACCAGAAAGTGAAGGACGCGGAGCGCGAAAAAGCCACCGAGTT
GTTCGGCACAGCTGAGGAGCCGTCTGCGCTGGCGTCTAAGATCATGGGAA
TCAAGTCTCGCACGTTTGATGTGCCCTCGGGCGCAGGGGGTGCGGATCGT
GGTGCGCCCGCGGATAAGGCGGTGCGGGTGAAGTTGACGGAGAAGGAGAG
GAAGAGGGTGGAGAAGATGATTCGCGAGGCGAAGAGTTTGCAGGAGATTT
CGCGGTTGGAGAAGGAGTTGAATGAGGGGAGGATACCTGGAGGTGCATTG
GATTATGCTGATAGTGATGAGGAGATGCAGACATAGATGCGATTGACCGT
TGAACTGATCCAAAATTCCCTGTCCTACATTAACCCGCTCAAAGACCGCG
AGCTAGATCTTCGAGGGCACAAGATACCCGCTATTGAGAACTTGGGTATT
GCCAAGGACCAAGATGCAATCGACCTAACAGACAACGATATCACCTCCCT
CGGAAACTTTCCCTTCTTTCCTCGCCTCCGCACCCTCCTCCTCGCGCGTA
ACCGAGTCAAGCAGATCCAGCCGACGATATCGACCTCGGTGCCGAATCTG
AGCGCGCTGGTGTTGACGGCGAATAACATGAACGAGTTGGCGGATTTGGA
CCCGCTTAGAAATCTGGCCCAGTTGACGCATTTGGTGTTGCTGGAGAATC
CTGTTACCAGGAAGGAGCACTATCGCTACTACGTCATCTGGCGCATCCCC
AGCGTCCGCTTCCTCGACTACCAGAAAGTGAAGGACGCGGAGCGCGAAAA
AGCCACCGAGTTGTTCGGCACAGCTGAGGAGCCGTCTGCGCTGGCGTCTA
AGATCATGGGAATCAAGTCTCGCACGTTTGATGTGCCCTCGGGCGCAGGG
GGTGCGGATCGTGGTGCGCCCGCGGATAAGGCGGTGCGGGTGAAGTTGAC
GGAGAAGGAGAGGAAGAGGGTGGAGAAGATGATTCGCGAGGCGAAGAGTT
TGCAGGAGATTTCGCGGTTGGAGAAGGAGTTGAATGAGGGGAGGATACCT
GGAGGTGCATTGGATTATGCTGATAGTGATGAGGAGATGCAGACATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR032675 |
| DBxref | PFAM:PF14580 |
| DBxref | PFAM:PF13855 |
| Product | U2 snRNP complex subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851899.1 | supercontig | KZ851899.1:1154199..1155375 + |
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