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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851899.1:1340498..1342179+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_291671-T1 ID=M747DRAFT_291671-T1|Name=M747DRAFT_291671-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1682bp|location=Sequence derived from alignment at KZ851899.1:1340498..1342179+ (Aspergillus niger ATCC 13496)
TACCCTCCTTGCGCAAATACCTGAATGACCACTCGGGTTGTTTCATCTCA
TGCATGCGATGCAAGAGCCTGCAGTAATATCACGTGACTAGGAATGCTTA
TGTCATGATAGCCACACCTCAGCCACAAATGCGCCACTACGACTATCGAT
AATCCAGTTCTTGCTACCGACAACGCTCAACTTCGCCGCACCATCTCCGC
AGGGCTTCGCGTTTCTGTGTGGAAGCGCAGCTGATCCATATAACGACAAC
ATGCCTCCTCCACAGATCAAGCAGGATCTGAACCGGTCCGGATGGGAGAC
CACTGACTTCCCCTCCGTGTGCGAGAACTGCCTGCCCGACAATCCTTACG
TTCAGATGCTCAAGGAAGACCATGGCGCAGAATGCAAGATTGTAGGCAAC
CCTATCCTCAATCACACAAACATATGACACTAACAGATACCCAGTGCACG
CGTCCTTTCACCATCTTCCGCTGGAAAGCCGACCGCACCGCGCGCCAGAA
GCGTACTGCCATCTGCTTGACCTGCGCGCGGTTGAAGAACTGCTGTCAAT
GCTGTATGCTGGATCTGTCCTTCGGGCTGCCGATCGTCGTTCGTGATGCT
GCTTTGAAGATGGTCGCTCCAGGTCCCGAAAGCACCATCAACCGCGAATA
CTACGCACAAGGTCACGAGAAGGAGATCGAAGAGGGGCGTGGCGCGGTGG
AGGAATACGAGAAGACGGACGAGAAAGCTCGGGAGCTGCTTCGGAGACTC
GCCAACAGTGAACCCTACTACAGGAAGCCCCGCCAGATAGAGGCCGCACC
CCAAGACGAGGAGGGCGCGAGTGCAGGGCCCAGCGACGCACCGGTTGTAC
ACAGCCGTTACGGGAATGGTCCGGGGCCCATTCGGACGAGCGAAAGCAGG
AGGGGAACGCCACTTCCGGGTAGAGGACGAGGAGGTATGCGTGGTGGTCG
TGGTGGCCGACCATTCCCTAGCGCCGCTCAGGTCCCCCCATCGGCAGAAG
ATATCCTACCGCCCGCGGACCCGAATATCACATCGCTCTTTGTTACTGGT
GTCGAGGACGATCTTCCAGAACACACGCTGCGGACTTTCTTCACACAGTT
TGGACAGTTGCGGTCGCTCATTTGCTCCCACCGTGCTCACTCTGCATTCG
TCAACTTCGCCACTCGGGAAGGTGCTGAGGCGGCTGCCAAGCAGTGCCAG
GGTCGGGCTGTCATCCAGGGCTGCCCTCTGCGCGTTCGCTGGGGTAAGCC
CAAGCCGTTGGATAACATGGATCGGGAGGAACGCTTGAAGAATGCGCGGG
AAGGTCGGCAGGCGGCAGGCCCGCGGGGAGCCGATTCTGGAAAGAAGGCC
ATCACAGCTGCCGGAGAGGAGATTGGCAAAGAGCAAAAACAACGGAGTTA
TGCTGTCGCCCCACCCCCGGGCGCTGGAGAGGTCCAGTACTCCAGTTTGT
CTGGTGATTGATCTGCATTTCGACTTGCATTTTGGCTTGTTTTCTACGGG
GTCCGGGAACAAGGAGGTCTTATGTCTGTTCGCGAGCGGGCGTTGTTGTG
TATATTTTCTACATTGTGATTAAACCATAAAATACCCCCAAAGAGACGCC
GGAAGGAGAGAGAAAAGTTTGGGTATACTATAATACAATCTGCAAATGCC
ATAGTCTGCAGTCATCCTTTCACCCACGCATA back to topCoding sequence (CDS) from alignment at KZ851899.1:1340498..1342179+ >M747DRAFT_291671-T1 ID=M747DRAFT_291671-T1|Name=M747DRAFT_291671-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2316bp|location=Sequence derived from alignment at KZ851899.1:1340498..1342179+ (Aspergillus niger ATCC 13496)
ATGCCTCCTCCACAGATCAAGCAGGATCTGAACCGGTCCGGATGGGAGAC
CACTGACTTCCCCTCCGTGTGCGAGAACTGCCTGCCCGACAATCCTTACG
TTCAGATGCTCAAGGAAGACCATGGCGCAGAATGCAAGATTTGCACGCGT
CCTTTCACCATCTTCCGCTGGAAAGCCGACCGCACCGCGCGCCAGAAGCG
TACTGCCATCTGCTTGACCTGCGCGCGGTTGAAGAACTGCTGTCAATGCT
GTATGCTGGATCTGTCCTTCGGGCTGCCGATCGTCGTTCGTGATGCTGCT
TTGAAGATGGTCGCTCCAGGTCCCGAAAGCACCATCAACCGCGAATACTA
CGCACAAGGTCACGAGAAGGAGATCGAAGAGGGGCGTGGCGCGGTGGAGG
AATACGAGAAGACGGACGAGAAAGCTCGGGAGCTGCTTCGGAGACTCGCC
AACAGTGAACCCTACTACAGGAAGCCCCGCCAGATAGAGGCCGCACCCCA
AGACGAGGAGGGCGCGAGTGCAGGGCCCAGCGACGCACCGGTTGTACACA
GCCGTTACGGGAATGGTCCGGGGCCCATTCGGACGAGCGAAAGCAGGAGG
GGAACGCCACTTCCGGGTAGAGGACGAGGAGGTATGCGTGGTGGTCGTGG
TGGCCGACCATTCCCTAGCGCCGCTCAGGTCCCCCCATCGGCAGAAGATA
TCCTACCGCCCGCGGACCCGAATATCACATCGCTCTTTGTTACTGGTGTC
GAGGACGATCTTCCAGAACACACGCTGCGGACTTTCTTCACACAGTTTGG
ACAGTTGCGGTCGCTCATTTGCTCCCACCGTGCTCACTCTGCATTCGTCA
ACTTCGCCACTCGGGAAGGTGCTGAGGCGGCTGCCAAGCAGTGCCAGGGT
CGGGCTGTCATCCAGGGCTGCCCTCTGCGCGTTCGCTGGGGTAAGCCCAA
GCCGTTGGATAACATGGATCGGGAGGAACGCTTGAAGAATGCGCGGGAAG
GTCGGCAGGCGGCAGGCCCGCGGGGAGCCGATTCTGGAAAGAAGGCCATC
ACAGCTGCCGGAGAGGAGATTGGCAAAGAGCAAAAACAACGGAGTTATGC
TGTCGCCCCACCCCCGGGCGCTGGAGAGGTCCAGTACTCCAGTTTGTCTG
GTGATTGAATGCCTCCTCCACAGATCAAGCAGGATCTGAACCGGTCCGGA
TGGGAGACCACTGACTTCCCCTCCGTGTGCGAGAACTGCCTGCCCGACAA
TCCTTACGTTCAGATGCTCAAGGAAGACCATGGCGCAGAATGCAAGATTT
GCACGCGTCCTTTCACCATCTTCCGCTGGAAAGCCGACCGCACCGCGCGC
CAGAAGCGTACTGCCATCTGCTTGACCTGCGCGCGGTTGAAGAACTGCTG
TCAATGCTGTATGCTGGATCTGTCCTTCGGGCTGCCGATCGTCGTTCGTG
ATGCTGCTTTGAAGATGGTCGCTCCAGGTCCCGAAAGCACCATCAACCGC
GAATACTACGCACAAGGTCACGAGAAGGAGATCGAAGAGGGGCGTGGCGC
GGTGGAGGAATACGAGAAGACGGACGAGAAAGCTCGGGAGCTGCTTCGGA
GACTCGCCAACAGTGAACCCTACTACAGGAAGCCCCGCCAGATAGAGGCC
GCACCCCAAGACGAGGAGGGCGCGAGTGCAGGGCCCAGCGACGCACCGGT
TGTACACAGCCGTTACGGGAATGGTCCGGGGCCCATTCGGACGAGCGAAA
GCAGGAGGGGAACGCCACTTCCGGGTAGAGGACGAGGAGGTATGCGTGGT
GGTCGTGGTGGCCGACCATTCCCTAGCGCCGCTCAGGTCCCCCCATCGGC
AGAAGATATCCTACCGCCCGCGGACCCGAATATCACATCGCTCTTTGTTA
CTGGTGTCGAGGACGATCTTCCAGAACACACGCTGCGGACTTTCTTCACA
CAGTTTGGACAGTTGCGGTCGCTCATTTGCTCCCACCGTGCTCACTCTGC
ATTCGTCAACTTCGCCACTCGGGAAGGTGCTGAGGCGGCTGCCAAGCAGT
GCCAGGGTCGGGCTGTCATCCAGGGCTGCCCTCTGCGCGTTCGCTGGGGT
AAGCCCAAGCCGTTGGATAACATGGATCGGGAGGAACGCTTGAAGAATGC
GCGGGAAGGTCGGCAGGCGGCAGGCCCGCGGGGAGCCGATTCTGGAAAGA
AGGCCATCACAGCTGCCGGAGAGGAGATTGGCAAAGAGCAAAAACAACGG
AGTTATGCTGTCGCCCCACCCCCGGGCGCTGGAGAGGTCCAGTACTCCAG
TTTGTCTGGTGATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263BDA |
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR034356 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF00076 |
| Product | Pre-mRNA-splicing factor slt11 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851899.1 | supercontig | KZ851899.1:1340498..1342179 + |
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