You are here

Home

M747DRAFT_291698-T1, M747DRAFT_291698-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_291698-T1
Unique NameM747DRAFT_291698-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851899.1:1473170..1474935+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_291698-T1 ID=M747DRAFT_291698-T1|Name=M747DRAFT_291698-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1766bp|location=Sequence derived from alignment at KZ851899.1:1473170..1474935+ (Aspergillus niger ATCC 13496)
CTTCGCCAATCGCCCAACTCGCGAACTCTACGGACCGTCACAATGGCCTC
CACTGCTACGTGAGACTCCCTTTGAGATTCCCCTGCGGCTGATCGCTCGA
GGTGCCTGTGAGGTTACAGATATAGTCGTCCTTTCTCGCTGGAGATGCTG
CGACCAGAAACGGTTGCTGAGCACCAGCTCGATTTTTCCCGCGACCGCGC
TTCGCCCTTGAATCGCCTAAGACTTTGTTAGGAATATGAGGATTGGGTGC
GGCACGGTCTGGGGTATTGAGGTTGAAGGCACTGTGAACCTTCTCCTTGA
AAACAATTGTTGTGAGCTATCGTCATGTACCATTGCGCCGTGATAGGGCA
TGGTAGGGGCGAAAAGCGTCAACACCACTTCCCGAGCGTTATGCTTGGGG
TTTTGTCGGATGAGAATTATCATACTTGGTCGTAGTCGCCGCGGGCTTGC
GAACGTTGCTGCTGAGAATGCGTGACTAGTAGTGAGCTGGTTCGCGCGGG
CTCGACAAGTGAAGAAGAAAATTTTTTCTTCTACCTCACCGATCAAATGC
ATGTCGTCGAGTGCTTTTTTATCCATTGCCTTCAGTATGAGAATGTGGCA
CTATAGCTGCAATTCTTACACTCGGCGAAAGTCTGTGTAATCATTACGGA
CAGACTGTACTGACCTTAACAGCACTGTCCCCACCAAGGAGCAGGTTCTC
GTCCCCGAGACCCTCCTGAAGAAGCGCAAGAGCCAGGAGCAGGCTCGCGC
TGTCGCCCGTGAGGAGGCCGAGAAGAAGAAGGCCGTAAGTTATACCTTTT
TTTTATATATCCTCTTTCCCTCTTCCTTCTATAGTGATGACAACAACCAC
CACGCGACTAGACTACGGTCGATGCTGTCGCTTCGTTAACCATCTTTCGG
GGCTGAAAATGAAGCTTCAAATGATTTCATTTCACGAGTCATTTGCAAAG
ACCATCTGCTAACAGATGAATCCAGGCCAACAAGGAGAAGCGCGCCGTTA
TCTTCAAGCGTGCCGAGTCCTACGTCAAGGAGTACCGCGATGCTGAGCGC
GAGAAGATCCGCCTTGCCCGCGTTGCTCGCAAGGAGGGTAACTTCTACGT
TGCTGACGAGCCCAAGCTTGTCTTCGTTATCCGTATCAAGGGGTAAGTTA
ATCTAGCATGCCATATGAATGTCATGATATTAACAACTTGATAGTATCAA
CAAGATCCCTCCCCAGCCCCGCAAGATCCTCCAGCTGCTCCGTCTGCTCC
AGATCAACAACGGTACCTTCGTCCGTCTTACCAAGGCTACCCAGGAGATG
TTGACCATCATCAACCCCTACATTGCCTACGGTTACCCCAACCTCAAGTC
CGTCCGTGAGCTCGTCTACAAGCGCGGTTACGGAAAGGTCGACAAGCAGC
GTGTTCCCCTCACCGACAACCAGATCATTGAGGAGAACCTCGGCAAGTAC
GGCATTGTCTGCATGGAGGATCTTATCCACGAGATCTACACCGTTGGCCC
CAACTTCAAGCAGGCCAACAACTTCCTGTGGCCCTTCAAGCTCTCCAACC
CCACTGGTGGCTTCCACACCCGCAAGTTCAAGCACTTCATCGAGGGTGGT
GACTACGGTAACCGTGAGGAGAACATCAACGGCCTCATCCGCCAGATGAA
CTAGATTCATCATCGGTGATGGCTTGTCCGTACCGGGTTGTTATGAGCTC
CGAATTTCCTAGTTAGCGGGTACTGGTCTAAAATCTGGGTACAAAAATTT
AAAAGCTTCGTACAAC
back to top

Coding sequence (CDS) from alignment at KZ851899.1:1473170..1474935+

>M747DRAFT_291698-T1 ID=M747DRAFT_291698-T1|Name=M747DRAFT_291698-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3024bp|location=Sequence derived from alignment at KZ851899.1:1473170..1474935+ (Aspergillus niger ATCC 13496)
ATGGCCTCCACTGCTACCACTGTCCCCACCAAGGAGCAGGTTCTCGTCCC
CGAGACCCTCCTGAAGAAGCGCAAGAGCCAGGAGCAGGCTCGCGCTGTCG
CCCGTGAGGAGGCCGAGAAGAAGAAGGCCGCCAACAAGGAGAAGCGCGCC
GTTATCTTCAAGCGTGCCGAGTCCTACGTCAAGGAGTACCGCGATGCTGA
GCGCGAGAAGATCCGCCTTGCCCGCGTTGCTCGCAAGGAGGGTAACTTCT
ACGTTGCTGACGAGCCCAAGCTTGTCTTCGTTATCCGTATCAAGGGTATC
AACAAGATCCCTCCCCAGCCCCGCAAGATCCTCCAGCTGCTCCGTCTGCT
CCAGATCAACAACGGTACCTTCGTCCGTCTTACCAAGGCTACCCAGGAGA
TGTTGACCATCATCAACCCCTACATTGCCTACGGTTACCCCAACCTCAAG
TCCGTCCGTGAGCTCGTCTACAAGCGCGGTTACGGAAAGGTCGACAAGCA
GCGTGTTCCCCTCACCGACAACCAGATCATTGAGGAGAACCTCGGCAAGT
ACGGCATTGTCTGCATGGAGGATCTTATCCACGAGATCTACACCGTTGGC
CCCAACTTCAAGCAGGCCAACAACTTCCTGTGGCCCTTCAAGCTCTCCAA
CCCCACTGGTGGCTTCCACACCCGCAAGTTCAAGCACTTCATCGAGGGTG
GTGACTACGGTAACCGTGAGGAGAACATCAACGGCCTCATCCGCCAGATG
AACTAGATGGCCTCCACTGCTACCACTGTCCCCACCAAGGAGCAGGTTCT
CGTCCCCGAGACCCTCCTGAAGAAGCGCAAGAGCCAGGAGCAGGCTCGCG
CTGTCGCCCGTGAGGAGGCCGAGAAGAAGAAGGCCGCCAACAAGGAGAAG
CGCGCCGTTATCTTCAAGCGTGCCGAGTCCTACGTCAAGGAGTACCGCGA
TGCTGAGCGCGAGAAGATCCGCCTTGCCCGCGTTGCTCGCAAGGAGGGTA
ACTTCTACGTTGCTGACGAGCCCAAGCTTGTCTTCGTTATCCGTATCAAG
GGTATCAACAAGATCCCTCCCCAGCCCCGCAAGATCCTCCAGCTGCTCCG
TCTGCTCCAGATCAACAACGGTACCTTCGTCCGTCTTACCAAGGCTACCC
AGGAGATGTTGACCATCATCAACCCCTACATTGCCTACGGTTACCCCAAC
CTCAAGTCCGTCCGTGAGCTCGTCTACAAGCGCGGTTACGGAAAGGTCGA
CAAGCAGCGTGTTCCCCTCACCGACAACCAGATCATTGAGGAGAACCTCG
GCAAGTACGGCATTGTCTGCATGGAGGATCTTATCCACGAGATCTACACC
GTTGGCCCCAACTTCAAGCAGGCCAACAACTTCCTGTGGCCCTTCAAGCT
CTCCAACCCCACTGGTGGCTTCCACACCCGCAAGTTCAAGCACTTCATCG
AGGGTGGTGACTACGGTAACCGTGAGGAGAACATCAACGGCCTCATCCGC
CAGATGAACTAGATGGCCTCCACTGCTACCACTGTCCCCACCAAGGAGCA
GGTTCTCGTCCCCGAGACCCTCCTGAAGAAGCGCAAGAGCCAGGAGCAGG
CTCGCGCTGTCGCCCGTGAGGAGGCCGAGAAGAAGAAGGCCGCCAACAAG
GAGAAGCGCGCCGTTATCTTCAAGCGTGCCGAGTCCTACGTCAAGGAGTA
CCGCGATGCTGAGCGCGAGAAGATCCGCCTTGCCCGCGTTGCTCGCAAGG
AGGGTAACTTCTACGTTGCTGACGAGCCCAAGCTTGTCTTCGTTATCCGT
ATCAAGGGTATCAACAAGATCCCTCCCCAGCCCCGCAAGATCCTCCAGCT
GCTCCGTCTGCTCCAGATCAACAACGGTACCTTCGTCCGTCTTACCAAGG
CTACCCAGGAGATGTTGACCATCATCAACCCCTACATTGCCTACGGTTAC
CCCAACCTCAAGTCCGTCCGTGAGCTCGTCTACAAGCGCGGTTACGGAAA
GGTCGACAAGCAGCGTGTTCCCCTCACCGACAACCAGATCATTGAGGAGA
ACCTCGGCAAGTACGGCATTGTCTGCATGGAGGATCTTATCCACGAGATC
TACACCGTTGGCCCCAACTTCAAGCAGGCCAACAACTTCCTGTGGCCCTT
CAAGCTCTCCAACCCCACTGGTGGCTTCCACACCCGCAAGTTCAAGCACT
TCATCGAGGGTGGTGACTACGGTAACCGTGAGGAGAACATCAACGGCCTC
ATCCGCCAGATGAACTAGATGGCCTCCACTGCTACCACTGTCCCCACCAA
GGAGCAGGTTCTCGTCCCCGAGACCCTCCTGAAGAAGCGCAAGAGCCAGG
AGCAGGCTCGCGCTGTCGCCCGTGAGGAGGCCGAGAAGAAGAAGGCCGCC
AACAAGGAGAAGCGCGCCGTTATCTTCAAGCGTGCCGAGTCCTACGTCAA
GGAGTACCGCGATGCTGAGCGCGAGAAGATCCGCCTTGCCCGCGTTGCTC
GCAAGGAGGGTAACTTCTACGTTGCTGACGAGCCCAAGCTTGTCTTCGTT
ATCCGTATCAAGGGTATCAACAAGATCCCTCCCCAGCCCCGCAAGATCCT
CCAGCTGCTCCGTCTGCTCCAGATCAACAACGGTACCTTCGTCCGTCTTA
CCAAGGCTACCCAGGAGATGTTGACCATCATCAACCCCTACATTGCCTAC
GGTTACCCCAACCTCAAGTCCGTCCGTGAGCTCGTCTACAAGCGCGGTTA
CGGAAAGGTCGACAAGCAGCGTGTTCCCCTCACCGACAACCAGATCATTG
AGGAGAACCTCGGCAAGTACGGCATTGTCTGCATGGAGGATCTTATCCAC
GAGATCTACACCGTTGGCCCCAACTTCAAGCAGGCCAACAACTTCCTGTG
GCCCTTCAAGCTCTCCAACCCCACTGGTGGCTTCCACACCCGCAAGTTCA
AGCACTTCATCGAGGGTGGTGACTACGGTAACCGTGAGGAGAACATCAAC
GGCCTCATCCGCCAGATGAACTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0022625cytosolic large ribosomal subunit
Vocabulary: Biological Process
TermDefinition
GO:0000463maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL7M747DRAFT_291698Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291698-T1M747DRAFT_291698-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291698-T1.utr5p1M747DRAFT_291698-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291698-T1.exon1M747DRAFT_291698-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_291698-T1.exon2M747DRAFT_291698-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_291698-T1.exon3M747DRAFT_291698-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_291698-T1.exon4M747DRAFT_291698-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291698-T1.cdsM747DRAFT_291698-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291698-T1.utr3p1M747DRAFT_291698-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264P3R
DBxrefInterPro:IPR035808
DBxrefInterPro:IPR018038
DBxrefInterPro:IPR012988
DBxrefInterPro:IPR016082
DBxrefInterPro:IPR005998
DBxrefInterPro:IPR023106
DBxrefInterPro:IPR036919
DBxrefPFAM:PF08079
DBxrefPFAM:PF00327
Product60S ribosomal protein L7
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851899.1supercontigKZ851899.1:1473170..1474935 +
Powered by Drupal