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M747DRAFT_291796-T1, M747DRAFT_291796-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_291796-T1
Unique NameM747DRAFT_291796-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851899.1:1752194..1753817-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_291796-T1 ID=M747DRAFT_291796-T1|Name=M747DRAFT_291796-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1624bp|location=Sequence derived from alignment at KZ851899.1:1752194..1753817- (Aspergillus niger ATCC 13496)
AAGGTCTCCGATACAACACCTGTCTTGTCCCGTCCCGTCCCCTGACCCCA
TTCTCCGGACCGGCTCCTGGTTCCGTGGAAGATCCTGAATCCAGCACCTG
CCACTATTCGAAGACGAGCTTTCTTGCTGTCAATATTATTGACAGAGCCA
AGCAGATAAACTCAGTGAAGTGAAGCTTTGGTTCCAGTCAATACCAAATT
GTCGAGAAACCATAAGCGGGACCGGAAGGGATAGGAGAAAAGAGAGGGGG
CACGCAAGACCAACAGAGGGAGAGGGGAGAATAACGTCAGACCCAACTAA
GACGATTATCGAGCAGGGGCCAGCACAACGCAGAACTTGAGTCACTATCA
CGGCTATTATCCCTCGCCCTCTGTTTACCTCGAGTCTGCAACAACAAAGA
TGGCTGGTACAAGGAACTACGACTTTCTGGTAAGTATTGACTAAACTCCC
AAGAAACCATAAGCTAAATGTCGGTCTTTGTAGATCAAGTTACTACTTAT
TGGGGACTCTGGGGTGGGAAAGTCATGCTGTCTATTGCGATTCAGTGAAG
ACTCGTTCACTCCGTCGTTCATTACTACCATCGGAATCGACTTCAAAATA
CGTACCATCGAATTGGACGGTAAAAGAGTAAAGCTCCAGATATGGGATAC
AGCTGGGCAAGAGCGATTTAGAACTATCACTACTGCTTACTACAGAGGAG
CCATGGGCATTCTTCTTGTATACGATGTCACTGATGAAAGATCATTCCAA
AGTGAGAAACGCCTTCCTTAAACCCGAGGTGGGTCATAAGATAATTTGAT
GCTAATGCCCAATCACCTTAGACATTCGCACCTGGTTCTCAAATGTCGAA
CAACATGCGAGCGAAGGCGTTCACAAGATCCTTATTGGCAACAAATGTGA
TTGGGAAGAGAAGAGGGCTGTGTCAACCGAGCAAGGGCAGCAATTGGCTA
ATGAGCTGGGAATACCATTCCTTGAAGTATCGGCTAAGAACAACATCAAC
ATCGAGAAAGCGTTTTATGATCTCGCATCCGACATCAAAAAAGGAATGGA
TACGTCGAAGTCTGAACAGGTCGGCTCTCAGGGCGTGAGCATAGACCAGC
AAGGTTCCGGGTTGAATGGCAGCGCAGGTGGGAAGTGCTGTTGAATAGAT
AGTGCACCCTCATTTGGTCTTCGGGTTATATCTTTCCATCATGACTCTAT
GTCTTTGCGCGTTACAGGTTTGTGTCATGGCTTCAGTACATCATTACGTT
CACGGTTCGAATAGATGCTGGGAAGCTAATTGGCTGATTCTGCTCCTATC
CTATGTATGTTGATAATGATGGCAGGGGCTTATGGTTTTCGTGATTGCCT
TTATCCTTCTTTCTGTTCTGTCTTGGGTTCTCATCCATTTACTGCGATCG
AACTTTCCCAGGTGGCGTTATTCTGTTATATTCATAACTGTGCAAATGAT
ATTCGGTATGGCCATAAACAGTCTTCTGGAAGTGCGGTATACATCACCCT
CCAGAATCCCCTTATAAACATGAGGAAACATGGGGCATGTCCGTTTTTAA
ATGATCTTGGCAAGAGTTGAAGGCAGCCGGAGAGTCAACCCTGATGGTGA
TTGTATTACAAATCGAATATGTTG
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Coding sequence (CDS) from alignment at KZ851899.1:1752194..1753817-

>M747DRAFT_291796-T1 ID=M747DRAFT_291796-T1|Name=M747DRAFT_291796-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1863bp|location=Sequence derived from alignment at KZ851899.1:1752194..1753817- (Aspergillus niger ATCC 13496)
ACATTCGCACCTGGTTCTCAAATGTCGAACAACATGCGAGCGAAGGCGTT
CACAAGATCCTTATTGGCAACAAATGTGATTGGGAAGAGAAGAGGGCTGT
GTCAACCGAGCAAGGGCAGCAATTGGCTAATGAGCTGGGAATACCATTCC
TTGAAGTATCGGCTAAGAACAACATCAACATCGAGAAAGCGTTTTATGAT
CTCGCATCCGACATCAAAAAAGGAATGGATACGTCGAAGTCTGAACAGGT
CGGCTCTCAGGGCGTGAGCATAGACCAGCAAGGTTCCGGGTTGAATGGCA
GCGCAGGTGGGAAGTGCTGTTGAATCAAGTTACTACTTATTGGGGACTCT
GGGGTGGGAAAGTCATGCTGTCTATTGCGATTCAGTGAAGACTCGTTCAC
TCCGTCGTTCATTACTACCATCGGAATCGACTTCAAAATACGTACCATCG
AATTGGACGGTAAAAGAGTAAAGCTCCAGATATGGGATACAGCTGGGCAA
GAGCGATTTAGAACTATCACTACTGCTTACTACAGAGGAGCCATGGGCAT
TCTTCTTGTATACGATGTCACTGATGAAAGATCATTCCAAAATGGCTGGT
ACAAGGAACTACGACTTTCTGACATTCGCACCTGGTTCTCAAATGTCGAA
CAACATGCGAGCGAAGGCGTTCACAAGATCCTTATTGGCAACAAATGTGA
TTGGGAAGAGAAGAGGGCTGTGTCAACCGAGCAAGGGCAGCAATTGGCTA
ATGAGCTGGGAATACCATTCCTTGAAGTATCGGCTAAGAACAACATCAAC
ATCGAGAAAGCGTTTTATGATCTCGCATCCGACATCAAAAAAGGAATGGA
TACGTCGAAGTCTGAACAGGTCGGCTCTCAGGGCGTGAGCATAGACCAGC
AAGGTTCCGGGTTGAATGGCAGCGCAGGTGGGAAGTGCTGTTGAATCAAG
TTACTACTTATTGGGGACTCTGGGGTGGGAAAGTCATGCTGTCTATTGCG
ATTCAGTGAAGACTCGTTCACTCCGTCGTTCATTACTACCATCGGAATCG
ACTTCAAAATACGTACCATCGAATTGGACGGTAAAAGAGTAAAGCTCCAG
ATATGGGATACAGCTGGGCAAGAGCGATTTAGAACTATCACTACTGCTTA
CTACAGAGGAGCCATGGGCATTCTTCTTGTATACGATGTCACTGATGAAA
GATCATTCCAAAATGGCTGGTACAAGGAACTACGACTTTCTGACATTCGC
ACCTGGTTCTCAAATGTCGAACAACATGCGAGCGAAGGCGTTCACAAGAT
CCTTATTGGCAACAAATGTGATTGGGAAGAGAAGAGGGCTGTGTCAACCG
AGCAAGGGCAGCAATTGGCTAATGAGCTGGGAATACCATTCCTTGAAGTA
TCGGCTAAGAACAACATCAACATCGAGAAAGCGTTTTATGATCTCGCATC
CGACATCAAAAAAGGAATGGATACGTCGAAGTCTGAACAGGTCGGCTCTC
AGGGCGTGAGCATAGACCAGCAAGGTTCCGGGTTGAATGGCAGCGCAGGT
GGGAAGTGCTGTTGAATCAAGTTACTACTTATTGGGGACTCTGGGGTGGG
AAAGTCATGCTGTCTATTGCGATTCAGTGAAGACTCGTTCACTCCGTCGT
TCATTACTACCATCGGAATCGACTTCAAAATACGTACCATCGAATTGGAC
GGTAAAAGAGTAAAGCTCCAGATATGGGATACAGCTGGGCAAGAGCGATT
TAGAACTATCACTACTGCTTACTACAGAGGAGCCATGGGCATTCTTCTTG
TATACGATGTCACTGATGAAAGATCATTCCAAAATGGCTGGTACAAGGAA
CTACGACTTTCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
YPT2M747DRAFT_291796Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291796-T1M747DRAFT_291796-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291796-T1.cdsM747DRAFT_291796-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291796-T1.utr3p1M747DRAFT_291796-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291796-T1.exon3M747DRAFT_291796-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_291796-T1.exon2M747DRAFT_291796-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_291796-T1.exon1M747DRAFT_291796-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291796-T1.utr5p1M747DRAFT_291796-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR001806
DBxrefInterPro:IPR005225
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF04670
DBxrefPFAM:PF00025
ProductGTPase Ypt2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851899.1supercontigKZ851899.1:1752194..1753817 -
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