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M747DRAFT_292029-T1, M747DRAFT_292029-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_292029-T1
Unique NameM747DRAFT_292029-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851900.1:890155..893174+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_292029-T1 ID=M747DRAFT_292029-T1|Name=M747DRAFT_292029-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=3020bp|location=Sequence derived from alignment at KZ851900.1:890155..893174+ (Aspergillus niger ATCC 13496)
CCACCACCCATTACCTTGGCATATTCTTTTCTTTCTTTTACTCTTCTCTA
GATTAAATCTAAGTTTCTAGTCGCCTGCTTTCCGCTGCTTGCATGCCCCC
ATACGTCCCCCGAAAGCGTCTCTCTTCCGAGGATCCGCCCGCCGCCAAAC
GCCGTCATGCGACGCCTCCCATCGCCGCCGTCATCGAAGACACTGACACC
GAATCGTCCCTGAGCGATGTTCCCGAAGAGACGGAAACTCCCCAGGCACT
GGATGGATCGGATGAGGAAAGCAGCGACTCCGACGAGGTTGATTGGGAGG
ACGCCATCGAGTCCAATGCCAACGCCACCCCAGCCACGCCTTCCATCCTC
AACCCCGACCAGCACCAGGACCTGGAGTTGACACTAGACAAGAACGAGAT
CCACCTCACTGATCTGCTCGAAGGGAAAAAGGGCCCGTCAAAGATCGAAC
GCCAAATCCGCATCCAAACCCATTGTCTACATGTGCAGTTTCTGCTCCAC
CACAACGCCATCCGCAATGTCTGGGCCAACGACACCCAGCTCCACGAGAT
CCTGCGCCGCAAGCTACCCCAACCCATACACAAAGAGGTCAAGAAATGGC
GCATTGCATCCGGCCTCGAGGCTCCAGAGCCACCGCCCGAGAAGAAGTCG
AAGAAAGGAAAAGGGAAGCAGCGTCGTCAATCAGAACGGGATTGGGCTGA
AGGCTCGTCGCGACTTGAACCCGGCCAACCTGACATGAGCAGCGGTGACC
CCATTATCATCCTTCTCAAGGTCCTCGCTGCCTACTGGAAGAGCAAGTTC
AAGATCACCGCTCCTGGGCTACGTAAGCAGGGGTATCGCCCCATGGCTCA
GTTGGAGGCTCAGATCAAGTCCTTCCAGAAGGACGACCACGATCCCGAGA
AACACGGCGAAAGAATAGCCAGCATTGAGGAGTTCCGCCAGGCTGCCGAG
AACATGCAGGGCTCGCGTGACGTAGGCGCCCAGCTGTTCACGGCTCTGCT
GCGTGCTCTCGACATCGAAGCTCGACTAGTCGCCAGTCTGCAGCCCCTTG
GCTTCGGCTGGACCAAGAGCGAAACCTACACAACCAAGCCAAGCGCAGAC
ACCGAGCCATCGACGGAGAATGCGGAAACCGAAGACGCCATTGACGTAGA
GTCAGACAGCAGTGAAGACGACACAAAGCCCGCCCGTAGCAAGTACTTCA
GCAAATACGACGAAGACCTGCCCTTCCCCATCTACTGGACCGAAGTCGCC
TCTCCCATCACCCACCAAATCATCCCCGTCGACCCGCTTATCCTCCGCAA
CCCTGTCGCCACCACCCCCGAGCTCCAAGCAGCCTTCGAACCTCGCGGCG
GCAAAGCCGAAAAAGCCAAGCAAGTTATCTGCTACGTCGTGGCCTACTCG
TCCGATAAGACTGCCAAAGACGTGACAACACGCTATCTCCGCCGCCGCAC
CTGGCCTGGCAAAACCAAAGGCTACCGGATCCCCGTCGAGAAGATCCCCA
TACCAGGCCGCAAAGGCAAATACTACGAAGTCGACTGGTTCCGCGTAATC
CTCCGCGTCTACCAACGCGCCCAACCTCAACGCACCGCCGTCGACGACCT
CGAAGACACCAAGGACCTCCTCCCAAACCAACCCGAACGCAAACCCGGCA
AAGAAGGTGACACGCTCCAAAGCCTGCGCACATCCACGGAATTCGTCCTC
GAACGCTTCCTCCGGCGCGAAGAAGCTCTCAAACCCGGTGCGCGACATGT
CCGCACCTTCAAGACAGGCAAAGGGGCCAAAGCCAAAGAAGAGAAAGTCT
TCCGACGCAAAGACGTCCTGAAATGTCTATCCGCAGAGAGCTGGCACAAA
GAAGGCCGAAGACCCAAGGCTGGCGAGATGCCCCTGAAACGCGTGCCCAT
CCGCGCCGTCACTCTCCTCCGCAAACGCGAAGTCGACGAATTCGAGCGCC
AGAACGGCGAAAAGCCAAAACAGGGCCTCTACGCCATCCATCAAACGGAA
TACATCATTCCAGACCCCATCTGTGACGGTGTCATACCTAAAAACGAATA
CGGCAATATCGACTGCTTCGTCCCTAGCATGGTGCCCCGCGGTGCGGTCC
ATATTCCCTGGCCTGGAACTGTGCGCGTATGCAAGAAACTCGGCGTCGAT
TATGCAGAAGCAGTCACAGGCTTCGAGTTCGGGTCGAAGATGGCTGTCCC
TGTTATCCAGGGCGTGGTTGTCGCTGCGGAAAACGAGGACCTCGTTAAAG
ATGCCTGGTTAGTGGATGACGCAGAGAAACGTAAGCGGGAGCAGCGCAAA
GCCGAGGCGCGTATTCTGCAGACTTGGCGGAAGTTTCTCTTCGGGTTGCG
GATTAAGCAGCGTGTACAGGAGGAGTATGGTGGGAATGCGGACGACGGGG
TGGATCATGAGCGTGATGCTCATAATCCGTTTACAAATCGTCGTGGTCGT
TTGCCTGATCCAGATGCTTCTGCTTCTGCTTCTGCCCCTGCTCCGGATGA
GCACGACGAGGAAGTCCATGGTGGCGGGTTCCTACTTCCTGGTGAGGATG
AGGACGGGGCGGATGTAGATCGGGGCGGTGGATTCCTTCTTCCTGGGCAG
GAGGGAGATGATCATGATGATGGGGGATTGATTGTTGATCATCATGAGCA
ACAGCAGCAGCATGTACCGACTGAGCCTGCCACACCGGAGGTTGTTGATG
CGGAGATTGCTGATAGTGATGACGATGACGATGGCAAGGTGGAGAATCCG
ATCTCGTTAAGTTCTGACTCGGAGCTCTCGTCTCCCGTAGAGATACCGGA
TTCAGAGGAGTCAGATGCAGAGTCCGAGTCGGAATATGAGCCGGAGCCGC
GGCCGACGCGGAGAAGTACGAGGAGGGGTGGTCGTCGATAGATATTGTGT
TGTTTTGTTAACTCATGTATGTATAATTGTCTGTATGTTTTCATGTTTGG
CGTTGGTGGTATGTACCAGGCACAGGGACGGAGGTACTGGACGACATAAT
GACATAGATAGGGATTGCTG
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Coding sequence (CDS) from alignment at KZ851900.1:890155..893174+

>M747DRAFT_292029-T1 ID=M747DRAFT_292029-T1|Name=M747DRAFT_292029-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2799bp|location=Sequence derived from alignment at KZ851900.1:890155..893174+ (Aspergillus niger ATCC 13496)
ATGCCCCCATACGTCCCCCGAAAGCGTCTCTCTTCCGAGGATCCGCCCGC
CGCCAAACGCCGTCATGCGACGCCTCCCATCGCCGCCGTCATCGAAGACA
CTGACACCGAATCGTCCCTGAGCGATGTTCCCGAAGAGACGGAAACTCCC
CAGGCACTGGATGGATCGGATGAGGAAAGCAGCGACTCCGACGAGGTTGA
TTGGGAGGACGCCATCGAGTCCAATGCCAACGCCACCCCAGCCACGCCTT
CCATCCTCAACCCCGACCAGCACCAGGACCTGGAGTTGACACTAGACAAG
AACGAGATCCACCTCACTGATCTGCTCGAAGGGAAAAAGGGCCCGTCAAA
GATCGAACGCCAAATCCGCATCCAAACCCATTGTCTACATGTGCAGTTTC
TGCTCCACCACAACGCCATCCGCAATGTCTGGGCCAACGACACCCAGCTC
CACGAGATCCTGCGCCGCAAGCTACCCCAACCCATACACAAAGAGGTCAA
GAAATGGCGCATTGCATCCGGCCTCGAGGCTCCAGAGCCACCGCCCGAGA
AGAAGTCGAAGAAAGGAAAAGGGAAGCAGCGTCGTCAATCAGAACGGGAT
TGGGCTGAAGGCTCGTCGCGACTTGAACCCGGCCAACCTGACATGAGCAG
CGGTGACCCCATTATCATCCTTCTCAAGGTCCTCGCTGCCTACTGGAAGA
GCAAGTTCAAGATCACCGCTCCTGGGCTACGTAAGCAGGGGTATCGCCCC
ATGGCTCAGTTGGAGGCTCAGATCAAGTCCTTCCAGAAGGACGACCACGA
TCCCGAGAAACACGGCGAAAGAATAGCCAGCATTGAGGAGTTCCGCCAGG
CTGCCGAGAACATGCAGGGCTCGCGTGACGTAGGCGCCCAGCTGTTCACG
GCTCTGCTGCGTGCTCTCGACATCGAAGCTCGACTAGTCGCCAGTCTGCA
GCCCCTTGGCTTCGGCTGGACCAAGAGCGAAACCTACACAACCAAGCCAA
GCGCAGACACCGAGCCATCGACGGAGAATGCGGAAACCGAAGACGCCATT
GACGTAGAGTCAGACAGCAGTGAAGACGACACAAAGCCCGCCCGTAGCAA
GTACTTCAGCAAATACGACGAAGACCTGCCCTTCCCCATCTACTGGACCG
AAGTCGCCTCTCCCATCACCCACCAAATCATCCCCGTCGACCCGCTTATC
CTCCGCAACCCTGTCGCCACCACCCCCGAGCTCCAAGCAGCCTTCGAACC
TCGCGGCGGCAAAGCCGAAAAAGCCAAGCAAGTTATCTGCTACGTCGTGG
CCTACTCGTCCGATAAGACTGCCAAAGACGTGACAACACGCTATCTCCGC
CGCCGCACCTGGCCTGGCAAAACCAAAGGCTACCGGATCCCCGTCGAGAA
GATCCCCATACCAGGCCGCAAAGGCAAATACTACGAAGTCGACTGGTTCC
GCGTAATCCTCCGCGTCTACCAACGCGCCCAACCTCAACGCACCGCCGTC
GACGACCTCGAAGACACCAAGGACCTCCTCCCAAACCAACCCGAACGCAA
ACCCGGCAAAGAAGGTGACACGCTCCAAAGCCTGCGCACATCCACGGAAT
TCGTCCTCGAACGCTTCCTCCGGCGCGAAGAAGCTCTCAAACCCGGTGCG
CGACATGTCCGCACCTTCAAGACAGGCAAAGGGGCCAAAGCCAAAGAAGA
GAAAGTCTTCCGACGCAAAGACGTCCTGAAATGTCTATCCGCAGAGAGCT
GGCACAAAGAAGGCCGAAGACCCAAGGCTGGCGAGATGCCCCTGAAACGC
GTGCCCATCCGCGCCGTCACTCTCCTCCGCAAACGCGAAGTCGACGAATT
CGAGCGCCAGAACGGCGAAAAGCCAAAACAGGGCCTCTACGCCATCCATC
AAACGGAATACATCATTCCAGACCCCATCTGTGACGGTGTCATACCTAAA
AACGAATACGGCAATATCGACTGCTTCGTCCCTAGCATGGTGCCCCGCGG
TGCGGTCCATATTCCCTGGCCTGGAACTGTGCGCGTATGCAAGAAACTCG
GCGTCGATTATGCAGAAGCAGTCACAGGCTTCGAGTTCGGGTCGAAGATG
GCTGTCCCTGTTATCCAGGGCGTGGTTGTCGCTGCGGAAAACGAGGACCT
CGTTAAAGATGCCTGGTTAGTGGATGACGCAGAGAAACGTAAGCGGGAGC
AGCGCAAAGCCGAGGCGCGTATTCTGCAGACTTGGCGGAAGTTTCTCTTC
GGGTTGCGGATTAAGCAGCGTGTACAGGAGGAGTATGGTGGGAATGCGGA
CGACGGGGTGGATCATGAGCGTGATGCTCATAATCCGTTTACAAATCGTC
GTGGTCGTTTGCCTGATCCAGATGCTTCTGCTTCTGCTTCTGCCCCTGCT
CCGGATGAGCACGACGAGGAAGTCCATGGTGGCGGGTTCCTACTTCCTGG
TGAGGATGAGGACGGGGCGGATGTAGATCGGGGCGGTGGATTCCTTCTTC
CTGGGCAGGAGGGAGATGATCATGATGATGGGGGATTGATTGTTGATCAT
CATGAGCAACAGCAGCAGCATGTACCGACTGAGCCTGCCACACCGGAGGT
TGTTGATGCGGAGATTGCTGATAGTGATGACGATGACGATGGCAAGGTGG
AGAATCCGATCTCGTTAAGTTCTGACTCGGAGCTCTCGTCTCCCGTAGAG
ATACCGGATTCAGAGGAGTCAGATGCAGAGTCCGAGTCGGAATATGAGCC
GGAGCCGCGGCCGACGCGGAGAAGTACGAGGAGGGGTGGTCGTCGATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_292029M747DRAFT_292029Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292029-T1.utr5p1M747DRAFT_292029-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292029-T1.exon1M747DRAFT_292029-T1.exon1Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292029-T1.cdsM747DRAFT_292029-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292029-T1.utr3p1M747DRAFT_292029-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292029-T1M747DRAFT_292029-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR038765
DBxrefInterPro:IPR042488
DBxrefInterPro:IPR018325
DBxrefInterPro:IPR018328
DBxrefInterPro:IPR018326
DBxrefInterPro:IPR018327
DBxrefPFAM:PF03835
DBxrefPFAM:PF10405
DBxrefPFAM:PF10404
DBxrefPFAM:PF10403
ProductRad4-domain-containing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851900.1supercontigKZ851900.1:890155..893174 +
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