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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851900.1:1250837..1252302- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_292129-T1 ID=M747DRAFT_292129-T1|Name=M747DRAFT_292129-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1466bp|location=Sequence derived from alignment at KZ851900.1:1250837..1252302- (Aspergillus niger ATCC 13496)
TCTGGTCCTCGGTGAACAAATTCTCTTTCACCAATTGATGATGAGAAAGA
AGTTGCTCAGGAAGTTTCGCGCGTCTTCGATGATGACATCAGCAGATACA
CAATCGCGTATCACGTGAGGAGCAACTTTATCTTATCATCACATGATCCG
AGCGCATCAACGTTTATCGCGTCCTGATGTGCTCGGTCATTTCTCATCTC
GCATCAACTCCATAGACTTCCGTCGCAGACCCGTCGCTCATATCACAATG
GCTGAGACGACAAATGATACAGCTGCAACTGCAGCTGCAGCTGCGGACCC
CCAACCGCCGGTTGTCACATTCAAAAAGCGCGGCGCAAAGGCGAGTCAGA
ACATCCGCAAAAGACCAGCACCGCCTCCCGTATCGCAAGACGACGATTCT
TCCGACTTTTCCTCCTCTGAAGACGAATCGGGTCACAGAATAAAGCGCAG
AAAGAACAAGGGTGCTGGGGTTGTCTCTGCTTCATCTGCGACTACCAAGC
CTGTCGATCGGGAACCTGCGGCCACCGCCACCGGGGATGGCAAAGTCCAG
CTTGCGGATACGAACGACGCCACAAAACACGTCGACTGGTTTGACGAGGA
TTCTAAGGATGCGCGCTCATCGAAACCGCAATCTGCCTCGAATGAGCCGC
AGATGCCGGATGGCACATATAGGGGACTGGCGAACCAGACGTCATTCATC
AAGAAGAATCCGAATGCGCCGAACAGGTCATTCGGACCGATCAAGGCAGC
GACCAATATCCGTACTATAACAGTGACGGACTACTCTCCAGATGTGTGCA
AGGACTACAAGCAGACTGGATTCTGTGGTTTCGGTGATAATTGGTGAGTG
CCGTCGCCCCTTTCACCCGACATACACATTTGCCACTCAATAGGGAGCAG
CTTATCTAATTGAAGCATACGCTAACTATTATTGTACAGTAAATTCCTTC
ACGATCGAAGCGACTACAAACAAGGATGGGAACTGGATCGAGAGTGGGAG
ACCGTCACCAAGGGCAAACAATTGAAGGGAACAGTGGTTGCGAGTGCCGA
TCGGACAACGACGGAGAATAAAGACGACGATGAAGAGGCCATGCTGGAAG
ACATCCCGTTTGCCTGTTTTATCTGCAAGGGGCCATACAGGGAGCCGATC
GTCACGAAATGCGGTCACTACTTCTGCGAGCAGTGTGCTCTGCAAAGATA
CAGGAAGGACCCAAGCTGCGCAGCCTGTGGATCCGCCACGAATGGATTAT
TCAGTTCGGCCAAGAGATTGAAAAAGCTGCTAGAGCGCAAGAGGGAACTT
GCGGCGAAGAGGAGACAAGAGGCTATCGAAGCTGGTGAGGAAGTGAGTGA
CGAGGAAGACGAAGAATGAGATGCATGTACATAATCATCATTTGTTCCGG
ATCTAGGGATTTTCAGTAGGACGCTCTGAGAGCGCCTTCTCTTCATTGAC
AACCATTATCTTACAT back to topCoding sequence (CDS) from alignment at KZ851900.1:1250837..1252302- >M747DRAFT_292129-T1 ID=M747DRAFT_292129-T1|Name=M747DRAFT_292129-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2052bp|location=Sequence derived from alignment at KZ851900.1:1250837..1252302- (Aspergillus niger ATCC 13496)
TAAATTCCTTCACGATCGAAGCGACTACAAACAAGGATGGGAACTGGATC
GAGAGTGGGAGACCGTCACCAAGGGCAAACAATTGAAGGGAACAGTGGTT
GCGAGTGCCGATCGGACAACGACGGAGAATAAAGACGACGATGAAGAGGC
CATGCTGGAAGACATCCCGTTTGCCTGTTTTATCTGCAAGGGGCCATACA
GGGAGCCGATCGTCACGAAATGCGGTCACTACTTCTGCGAGCAGTGTGCT
CTGCAAAGATACAGGAAGGACCCAAGCTGCGCAGCCTGTGGATCCGCCAC
GAATGGATTATTCAGTTCGGCCAAGAGATTGAAAAAGCTGCTAGAGCGCA
AGAGGGAACTTGCGGCGAAGAGGAGACAAGAGGCTATCGAAGCTGGTGAG
GAAGTGAGTGACGAGGAAGACGAAGAATGAATGGCTGAGACGACAAATGA
TACAGCTGCAACTGCAGCTGCAGCTGCGGACCCCCAACCGCCGGTTGTCA
CATTCAAAAAGCGCGGCGCAAAGGCGAGTCAGAACATCCGCAAAAGACCA
GCACCGCCTCCCGTATCGCAAGACGACGATTCTTCCGACTTTTCCTCCTC
TGAAGACGAATCGGGTCACAGAATAAAGCGCAGAAAGAACAAGGGTGCTG
GGGTTGTCTCTGCTTCATCTGCGACTACCAAGCCTGTCGATCGGGAACCT
GCGGCCACCGCCACCGGGGATGGCAAAGTCCAGCTTGCGGATACGAACGA
CGCCACAAAACACGTCGACTGGTTTGACGAGGATTCTAAGGATGCGCGCT
CATCGAAACCGCAATCTGCCTCGAATGAGCCGCAGATGCCGGATGGCACA
TATAGGGGACTGGCGAACCAGACGTCATTCATCAAGAAGAATCCGAATGC
GCCGAACAGGTCATTCGGACCGATCAAGGCAGCGACCAATATCCGTACTA
TAACAGTGACGGACTACTCTCCAGATGTGTGCAAGGACTACAAGCAGACT
GGATTCTGTGGTTTCGGTGATAATTGTAAATTCCTTCACGATCGAAGCGA
CTACAAACAAGGATGGGAACTGGATCGAGAGTGGGAGACCGTCACCAAGG
GCAAACAATTGAAGGGAACAGTGGTTGCGAGTGCCGATCGGACAACGACG
GAGAATAAAGACGACGATGAAGAGGCCATGCTGGAAGACATCCCGTTTGC
CTGTTTTATCTGCAAGGGGCCATACAGGGAGCCGATCGTCACGAAATGCG
GTCACTACTTCTGCGAGCAGTGTGCTCTGCAAAGATACAGGAAGGACCCA
AGCTGCGCAGCCTGTGGATCCGCCACGAATGGATTATTCAGTTCGGCCAA
GAGATTGAAAAAGCTGCTAGAGCGCAAGAGGGAACTTGCGGCGAAGAGGA
GACAAGAGGCTATCGAAGCTGGTGAGGAAGTGAGTGACGAGGAAGACGAA
GAATGAATGGCTGAGACGACAAATGATACAGCTGCAACTGCAGCTGCAGC
TGCGGACCCCCAACCGCCGGTTGTCACATTCAAAAAGCGCGGCGCAAAGG
CGAGTCAGAACATCCGCAAAAGACCAGCACCGCCTCCCGTATCGCAAGAC
GACGATTCTTCCGACTTTTCCTCCTCTGAAGACGAATCGGGTCACAGAAT
AAAGCGCAGAAAGAACAAGGGTGCTGGGGTTGTCTCTGCTTCATCTGCGA
CTACCAAGCCTGTCGATCGGGAACCTGCGGCCACCGCCACCGGGGATGGC
AAAGTCCAGCTTGCGGATACGAACGACGCCACAAAACACGTCGACTGGTT
TGACGAGGATTCTAAGGATGCGCGCTCATCGAAACCGCAATCTGCCTCGA
ATGAGCCGCAGATGCCGGATGGCACATATAGGGGACTGGCGAACCAGACG
TCATTCATCAAGAAGAATCCGAATGCGCCGAACAGGTCATTCGGACCGAT
CAAGGCAGCGACCAATATCCGTACTATAACAGTGACGGACTACTCTCCAG
ATGTGTGCAAGGACTACAAGCAGACTGGATTCTGTGGTTTCGGTGATAAT
TG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046872 | metal ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036855 |
| DBxref | InterPro:IPR017907 |
| DBxref | InterPro:IPR013083 |
| DBxref | InterPro:IPR000571 |
| DBxref | InterPro:IPR001841 |
| DBxref | PFAM:PF13445 |
| DBxref | PFAM:PF00642 |
| DBxref | PFAM:PF13920 |
| DBxref | PFAM:PF13923 |
| DBxref | PFAM:PF00097 |
| Product | RNA-splicing factor |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851900.1 | supercontig | KZ851900.1:1250837..1252302 - |
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