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M747DRAFT_292172-T1, M747DRAFT_292172-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_292172-T1
Unique NameM747DRAFT_292172-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851900.1:1408708..1410907-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_292172-T1 ID=M747DRAFT_292172-T1|Name=M747DRAFT_292172-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2200bp|location=Sequence derived from alignment at KZ851900.1:1408708..1410907- (Aspergillus niger ATCC 13496)
TCACTGCGAACTGCTGCTGTCACAATCCTCCCGCCATCCCCCAGAAACCT
TGTTGCTATTACGGTTCTTGTCTGTGCTGAATCGACTACTTTGGGACCAA
TTTGACGTGAACCCTCAAGGTTACTCCACCCTGGTTTCCCCGGCATTTCT
CCCCCCCGCTCATCGACTGCGGAGACGTACATCCCTTTGCGCTACCGACG
TTCTCCGGACCACCATCTTCATCCCCGACGCGCATCACTCTTTTTCCTTT
AGCTAAAAACTGCCCTCTCATTTTACTGGAGGGCGTGTCGGTGTGGTCGA
AACGGATCCGGGAACATTGGAGGATGAAAGGGACCCGCGACCGATGGGTG
TAATACGGAAGAAGACCGCCTCGCGCGGCACTGAAGCGGGCACCAAGTAT
CACTGTGATATTTGCTCGGTTGATGTGACTTCGACGGTATAGTCTGCGAT
CTGGGTCCCAAGGACTTTCGCCTCTTGTCGATCTTAAACCTAACTTATCG
GTCTCTTTCTAGGTTCGCGTATCTTGCGCCCATCCCGCCTGCCACGAATA
CGATCTCTGCGTCCCCTGTTTCGCTGCCGGAGAGAAATCCAAGAACCATG
ACCCGTCGACACATCCGTTCCAGGTGATTGAACAAAACTCGGTCCCGATC
TTCGAGGAAGACTGGGGTGCGGACGAGGAGCTCCTGCTGCTGGAAGGCGC
CGAGATCTACGGACTGGGCTCATGGGCGGACATTGCAGACCACATTGGCG
GTTACCGCACCAAGGAGGAGGTCCGCGACCACTACATCAGCGCCTATATC
GATAGTCCAAACTTCCCGTTACCGGAACGCGCCGATCCGGATGACAAGCG
CCTCTCGGAGGCCATTTCGAAGGAAGAATTCCAGGCGCGGAAGAAACGCC
GCATTGAGGAGCGCAAAGAAGCGGCCAAGGCAGCGGCCCCCACAACACCG
AAGCAGAAGCCTACGGCCAGTGTACCGGCTTGTCACGAAGTGCAGGGTTA
CATGCCGGGTCGGTTGGAGTTTGAGACGGAGTTTATGAACGAAGCCGAGG
AAGCGGTACAGCATATGACATTTGAGCCTGGCGCGGGCGAGACAGCGAAC
GGCGAGACGGACGCGGAGATGGAACTGAAGATGACCGTAGTGGATATCTA
TAACTCACGGCTTACTGCGCGCACGGAGCGCAAGAAGATCCTTTTCGAGC
ACAATCTCCTCGAGTACCGTAAAAACACGGCGCTGGAGAAGAAGCGCACG
AAAGAGGAGCGCGATCTGCTGAACAAGGCGAAGCCGTTTGCCCGGATGAT
GAACCACGATGATTTCGAAGAGTTCAACAAGGGTCTTGAGTACGAGCACA
ACCTGCGGCTAGCCATCACGCAGCTCCAGGAGTGGCGCCAGATGGGAATT
GGCGATCTCAAGGGTGGAGAGAAATACGAACAGGAGAAGCAACAGCGGGC
ACAGCGGCTGATGCCGCAGGGCTCATTTGATCGGTTCGCCAGCACGCGAC
CGACGAAGCAGTCGCAGCAACCAGAACAGCCATCCGCCGCCAGTCAGCTG
ACGACCCCGGAGCTCCCTCTCCGGTTACAAAAGGCGTCTGGGGCGCCTAA
GGCACCAGAGCCTCCCAACCCGCCGATGAATGATTTTGATCGGGCGTTTG
CCGCCACCAATGGCGACGGGATCAGCACGCCGCAGCCAGCAAAGACCAAG
TTCGTGATCCAGCCACTAAACGGAGTGATTCCGTGGAAACTGGAGAACGA
GGGAGCACCGGATTTGCACCTGCTGACAAAGGAGGAAGTCGAGGTGTGCA
ATGTGCTGCACATGCAGCCCAAGCCGTACCTGGTAATTAAGGAGACGTTA
TTGAAAGAGGCGATGAAGCAGGGCGGCAGTTTAAAGAAGAAGGACGCGCG
AGCTATTTGCAAGGTCAGTCTCCTTCCCCCCACTGCCAGCAACAGGAGAT
GTATGGGTGTCTGACAAAGATTCTACAGGTCGACAGTACCAAGACGAGCC
GGATCTACGATTTCATGGTACACAGTGGCTGGATCAACAAGAGCTGAGCG
TTTGATTTGCATGAGCAGGATACCACGTGGTTCTGTGTAAGGAGTTGCGG
CGTTGGAGGTAGATGATACGATTTCTGGGCTTGATTAAGTAGATAGACAT
ATATGTTTATCTATACAAGGGACACGTCTAATGTTCTATCTATACTATGG
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Coding sequence (CDS) from alignment at KZ851900.1:1408708..1410907-

>M747DRAFT_292172-T1 ID=M747DRAFT_292172-T1|Name=M747DRAFT_292172-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4689bp|location=Sequence derived from alignment at KZ851900.1:1408708..1410907- (Aspergillus niger ATCC 13496)
GTCGACAGTACCAAGACGAGCCGGATCTACGATTTCATGGTACACAGTGG
CTGGATCAACAAGAGCTGAGTTCGCGTATCTTGCGCCCATCCCGCCTGCC
ACGAATACGATCTCTGCGTCCCCTGTTTCGCTGCCGGAGAGAAATCCAAG
AACCATGACCCGTCGACACATCCGTTCCAGGTGATTGAACAAAACTCGGT
CCCGATCTTCGAGGAAGACTGGGGTGCGGACGAGGAGCTCCTGCTGCTGG
AAGGCGCCGAGATCTACGGACTGGGCTCATGGGCGGACATTGCAGACCAC
ATTGGCGGTTACCGCACCAAGGAGGAGGTCCGCGACCACTACATCAGCGC
CTATATCGATAGTCCAAACTTCCCGTTACCGGAACGCGCCGATCCGGATG
ACAAGCGCCTCTCGGAGGCCATTTCGAAGGAAGAATTCCAGGCGCGGAAG
AAACGCCGCATTGAGGAGCGCAAAGAAGCGGCCAAGGCAGCGGCCCCCAC
AACACCGAAGCAGAAGCCTACGGCCAGTGTACCGGCTTGTCACGAAGTGC
AGGGTTACATGCCGGGTCGGTTGGAGTTTGAGACGGAGTTTATGAACGAA
GCCGAGGAAGCGGTACAGCATATGACATTTGAGCCTGGCGCGGGCGAGAC
AGCGAACGGCGAGACGGACGCGGAGATGGAACTGAAGATGACCGTAGTGG
ATATCTATAACTCACGGCTTACTGCGCGCACGGAGCGCAAGAAGATCCTT
TTCGAGCACAATCTCCTCGAGTACCGTAAAAACACGGCGCTGGAGAAGAA
GCGCACGAAAGAGGAGCGCGATCTGCTGAACAAGGCGAAGCCGTTTGCCC
GGATGATGAACCACGATGATTTCGAAGAGTTCAACAAGGGTCTTGAGTAC
GAGCACAACCTGCGGCTAGCCATCACGCAGCTCCAGGAGTGGCGCCAGAT
GGGAATTGGCGATCTCAAGGGTGGAGAGAAATACGAACAGGAGAAGCAAC
AGCGGGCACAGCGGCTGATGCCGCAGGGCTCATTTGATCGGTTCGCCAGC
ACGCGACCGACGAAGCAGTCGCAGCAACCAGAACAGCCATCCGCCGCCAG
TCAGCTGACGACCCCGGAGCTCCCTCTCCGGTTACAAAAGGCGTCTGGGG
CGCCTAAGGCACCAGAGCCTCCCAACCCGCCGATGAATGATTTTGATCGG
GCGTTTGCCGCCACCAATGGCGACGGGATCAGCACGCCGCAGCCAGCAAA
GACCAAGTTCGTGATCCAGCCACTAAACGGAGTGATTCCGTGGAAACTGG
AGAACGAGGGAGCACCGGATTTGCACCTGCTGACAAAGGAGGAAGTCGAG
GTGTGCAATGTGCTGCACATGCAGCCCAAGCCGTACCTGGTAATTAAGGA
GACGTTATTGAAAGAGGCGATGAAGCAGGGCGGCAGTTTAAAGAAGAAGG
ACGCGCGAGCTATTTGCAAGATGGGTGTAATACGGAAGAAGACCGCCTCG
CGCGGCACTGAAGCGGGCACCAAGTATCACTGTGATATTTGCTCGGTTGA
TGTGACTTCGACGGTCGACAGTACCAAGACGAGCCGGATCTACGATTTCA
TGGTACACAGTGGCTGGATCAACAAGAGCTGAGTTCGCGTATCTTGCGCC
CATCCCGCCTGCCACGAATACGATCTCTGCGTCCCCTGTTTCGCTGCCGG
AGAGAAATCCAAGAACCATGACCCGTCGACACATCCGTTCCAGGTGATTG
AACAAAACTCGGTCCCGATCTTCGAGGAAGACTGGGGTGCGGACGAGGAG
CTCCTGCTGCTGGAAGGCGCCGAGATCTACGGACTGGGCTCATGGGCGGA
CATTGCAGACCACATTGGCGGTTACCGCACCAAGGAGGAGGTCCGCGACC
ACTACATCAGCGCCTATATCGATAGTCCAAACTTCCCGTTACCGGAACGC
GCCGATCCGGATGACAAGCGCCTCTCGGAGGCCATTTCGAAGGAAGAATT
CCAGGCGCGGAAGAAACGCCGCATTGAGGAGCGCAAAGAAGCGGCCAAGG
CAGCGGCCCCCACAACACCGAAGCAGAAGCCTACGGCCAGTGTACCGGCT
TGTCACGAAGTGCAGGGTTACATGCCGGGTCGGTTGGAGTTTGAGACGGA
GTTTATGAACGAAGCCGAGGAAGCGGTACAGCATATGACATTTGAGCCTG
GCGCGGGCGAGACAGCGAACGGCGAGACGGACGCGGAGATGGAACTGAAG
ATGACCGTAGTGGATATCTATAACTCACGGCTTACTGCGCGCACGGAGCG
CAAGAAGATCCTTTTCGAGCACAATCTCCTCGAGTACCGTAAAAACACGG
CGCTGGAGAAGAAGCGCACGAAAGAGGAGCGCGATCTGCTGAACAAGGCG
AAGCCGTTTGCCCGGATGATGAACCACGATGATTTCGAAGAGTTCAACAA
GGGTCTTGAGTACGAGCACAACCTGCGGCTAGCCATCACGCAGCTCCAGG
AGTGGCGCCAGATGGGAATTGGCGATCTCAAGGGTGGAGAGAAATACGAA
CAGGAGAAGCAACAGCGGGCACAGCGGCTGATGCCGCAGGGCTCATTTGA
TCGGTTCGCCAGCACGCGACCGACGAAGCAGTCGCAGCAACCAGAACAGC
CATCCGCCGCCAGTCAGCTGACGACCCCGGAGCTCCCTCTCCGGTTACAA
AAGGCGTCTGGGGCGCCTAAGGCACCAGAGCCTCCCAACCCGCCGATGAA
TGATTTTGATCGGGCGTTTGCCGCCACCAATGGCGACGGGATCAGCACGC
CGCAGCCAGCAAAGACCAAGTTCGTGATCCAGCCACTAAACGGAGTGATT
CCGTGGAAACTGGAGAACGAGGGAGCACCGGATTTGCACCTGCTGACAAA
GGAGGAAGTCGAGGTGTGCAATGTGCTGCACATGCAGCCCAAGCCGTACC
TGGTAATTAAGGAGACGTTATTGAAAGAGGCGATGAAGCAGGGCGGCAGT
TTAAAGAAGAAGGACGCGCGAGCTATTTGCAAGATGGGTGTAATACGGAA
GAAGACCGCCTCGCGCGGCACTGAAGCGGGCACCAAGTATCACTGTGATA
TTTGCTCGGTTGATGTGACTTCGACGGTCGACAGTACCAAGACGAGCCGG
ATCTACGATTTCATGGTACACAGTGGCTGGATCAACAAGAGCTGAGTTCG
CGTATCTTGCGCCCATCCCGCCTGCCACGAATACGATCTCTGCGTCCCCT
GTTTCGCTGCCGGAGAGAAATCCAAGAACCATGACCCGTCGACACATCCG
TTCCAGGTGATTGAACAAAACTCGGTCCCGATCTTCGAGGAAGACTGGGG
TGCGGACGAGGAGCTCCTGCTGCTGGAAGGCGCCGAGATCTACGGACTGG
GCTCATGGGCGGACATTGCAGACCACATTGGCGGTTACCGCACCAAGGAG
GAGGTCCGCGACCACTACATCAGCGCCTATATCGATAGTCCAAACTTCCC
GTTACCGGAACGCGCCGATCCGGATGACAAGCGCCTCTCGGAGGCCATTT
CGAAGGAAGAATTCCAGGCGCGGAAGAAACGCCGCATTGAGGAGCGCAAA
GAAGCGGCCAAGGCAGCGGCCCCCACAACACCGAAGCAGAAGCCTACGGC
CAGTGTACCGGCTTGTCACGAAGTGCAGGGTTACATGCCGGGTCGGTTGG
AGTTTGAGACGGAGTTTATGAACGAAGCCGAGGAAGCGGTACAGCATATG
ACATTTGAGCCTGGCGCGGGCGAGACAGCGAACGGCGAGACGGACGCGGA
GATGGAACTGAAGATGACCGTAGTGGATATCTATAACTCACGGCTTACTG
CGCGCACGGAGCGCAAGAAGATCCTTTTCGAGCACAATCTCCTCGAGTAC
CGTAAAAACACGGCGCTGGAGAAGAAGCGCACGAAAGAGGAGCGCGATCT
GCTGAACAAGGCGAAGCCGTTTGCCCGGATGATGAACCACGATGATTTCG
AAGAGTTCAACAAGGGTCTTGAGTACGAGCACAACCTGCGGCTAGCCATC
ACGCAGCTCCAGGAGTGGCGCCAGATGGGAATTGGCGATCTCAAGGGTGG
AGAGAAATACGAACAGGAGAAGCAACAGCGGGCACAGCGGCTGATGCCGC
AGGGCTCATTTGATCGGTTCGCCAGCACGCGACCGACGAAGCAGTCGCAG
CAACCAGAACAGCCATCCGCCGCCAGTCAGCTGACGACCCCGGAGCTCCC
TCTCCGGTTACAAAAGGCGTCTGGGGCGCCTAAGGCACCAGAGCCTCCCA
ACCCGCCGATGAATGATTTTGATCGGGCGTTTGCCGCCACCAATGGCGAC
GGGATCAGCACGCCGCAGCCAGCAAAGACCAAGTTCGTGATCCAGCCACT
AAACGGAGTGATTCCGTGGAAACTGGAGAACGAGGGAGCACCGGATTTGC
ACCTGCTGACAAAGGAGGAAGTCGAGGTGTGCAATGTGCTGCACATGCAG
CCCAAGCCGTACCTGGTAATTAAGGAGACGTTATTGAAAGAGGCGATGAA
GCAGGGCGGCAGTTTAAAGAAGAAGGACGCGCGAGCTATTTGCAAGATGG
GTGTAATACGGAAGAAGACCGCCTCGCGCGGCACTGAAGCGGGCACCAAG
TATCACTGTGATATTTGCTCGGTTGATGTGACTTCGACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
GO:0035065regulation of histone acetylation
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003713transcription coactivator activity
GO:0005515protein binding
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_292172M747DRAFT_292172Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292172-T1M747DRAFT_292172-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292172-T1.cdsM747DRAFT_292172-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292172-T1.utr3p1M747DRAFT_292172-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292172-T1.exon3M747DRAFT_292172-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_292172-T1.exon2M747DRAFT_292172-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_292172-T1.exon1M747DRAFT_292172-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292172-T1.utr5p1M747DRAFT_292172-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR009057
DBxrefInterPro:IPR041983
DBxrefInterPro:IPR017884
DBxrefInterPro:IPR016827
DBxrefInterPro:IPR007526
DBxrefInterPro:IPR001005
DBxrefInterPro:IPR000433
DBxrefPFAM:PF00569
DBxrefPFAM:PF04433
DBxrefPFAM:PF00249
ProductSAGA complex subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851900.1supercontigKZ851900.1:1408708..1410907 -
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