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M747DRAFT_292186-T1, M747DRAFT_292186-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_292186-T1
Unique NameM747DRAFT_292186-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851900.1:1449715..1451242+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_292186-T1 ID=M747DRAFT_292186-T1|Name=M747DRAFT_292186-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1528bp|location=Sequence derived from alignment at KZ851900.1:1449715..1451242+ (Aspergillus niger ATCC 13496)
CGACCCCGACACCGTCTACCTTACTTCCCACCACCCAGCACACTTCGCCG
CCTCCCCATCATGGCTTCCGTCCCGAGTGTGCAATGCTTCGGCAAGAAGA
AGACGGGTGAGTTTTCCTCTATAATTTTGGTGGTGATATAAATGGGGTGG
ATTTGAAGATTGGAGGTTTGGATGGGATATGGTGTGACTTGGGATGCTAA
CGGTTGATGTGTTTTAGCCACCGCTGTCGCCCACTGCAAGGTATGAGAAT
TACATTCTCTGTCTATCTATATCTCCTGGTCTAGGATTATCGTGTTGCGG
ATGCCGATGTGTCGTTCGAATTGGTCAATATTGGTCTTGGAGGTTCGGAA
GGATCTGGGTATCATTCGACATTTAAGGAGGATTATGAAGCTTGTGGATT
GCCCGGAAGCACGGGGGAAGCGTTATCGAGTATCGAAACGAAGAACGACA
CGGCACAAGGAAATTTTGAAGGAAGATCAATTACGTGAAGGGAAAAGTGA
AGAAGACATGCGCAACCAAACCGAACGACACATCTGCATCCGCACCGCAT
ATATCAGATGAACCAGATCGCAACGGAAAGAAGGAGAACGTCAAAACTGA
TTCGTTTTTTCCCAACTACAGCAAGGCAAGGGCATGATCCGGGTCAACGG
CCAGCCCCTCTCTCTGGTCCAGCCTGAGATCCTCCGCTTCAAGGTACACT
CACCTACCCGTCGGGTTTTACGAAGTGCCATGGACGGGGTAATTGACAGG
ATTATTCAATGAAATAGGTCTACGAGCCCCTCCTGATCGTTGGAGCCGAC
AAGTTCGCCGGTGTCGACATCCGCGTCCGCGTCTCCGGTGGTGGTCACAC
CTCCCAGGTTTACGCCATCCGTCAGGCCATCGCCAAGTCCATCGTCGCCT
ACTACCAGAAGTACGTCGATGAGCACTCCAAGAACCAGCTGAAGCAGGCT
CTTGTCCAGTACGACCGCACACTCCTCGTCGCCGACAACCGTCGTACGGA
GCCCAAGAAGTTCGGTGGTCGTGGTGCCCGCGCTCGCTACCAGAAGTCCT
ACCGTTAAACGGCTTCATTATACATCAACAATATACACACATACAAGCTT
GCTCCGCCTCTCCTGTTTCCTGTCTCATTTCTTTGTTTCCCGTTCCGTTT
CCGTTTCGAAAGAAGGGAAATCATGGATTTGGGGGCCCCTCTTTTCCCGG
CTGTTATGCTTCCCCTTTTACGATTCGGGTTTTGCTTGCTTGGCTCGGGT
CGGTCTTAAAAAAGTTTTCCTATAACGTTCCCCCTCTTATGATTATGGCC
GGGTTATGAGGGTTGTTTTGTGGGGCAGAAATGGGATATTATGCGGGATG
GTGTTGTTGTTGCTGTTTGTCGTTTTAACGGTTGTACTTACTGGGGTGAG
GGAGAGAAGAAGAGAGAGATCTGGTGTGGTGGTCCCATTCCACCGCTGCA
GACAATTCAATCAAATAAGAGGATGGTTTGGGTTGTTTACAGTGGCTGTG
TTTGGAAATTATGGTGCAATGCTGGCCC
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Coding sequence (CDS) from alignment at KZ851900.1:1449715..1451242+

>M747DRAFT_292186-T1 ID=M747DRAFT_292186-T1|Name=M747DRAFT_292186-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1728bp|location=Sequence derived from alignment at KZ851900.1:1449715..1451242+ (Aspergillus niger ATCC 13496)
ATGGCTTCCGTCCCGAGTGTGCAATGCTTCGGCAAGAAGAAGACGGCCAC
CGCTGTCGCCCACTGCAAGCAAGGCAAGGGCATGATCCGGGTCAACGGCC
AGCCCCTCTCTCTGGTCCAGCCTGAGATCCTCCGCTTCAAGGTCTACGAG
CCCCTCCTGATCGTTGGAGCCGACAAGTTCGCCGGTGTCGACATCCGCGT
CCGCGTCTCCGGTGGTGGTCACACCTCCCAGGTTTACGCCATCCGTCAGG
CCATCGCCAAGTCCATCGTCGCCTACTACCAGAAGTACGTCGATGAGCAC
TCCAAGAACCAGCTGAAGCAGGCTCTTGTCCAGTACGACCGCACACTCCT
CGTCGCCGACAACCGTCGTACGGAGCCCAAGAAGTTCGGTGGTCGTGGTG
CCCGCGCTCGCTACCAGAAGTCCTACCGTTAAATGGCTTCCGTCCCGAGT
GTGCAATGCTTCGGCAAGAAGAAGACGGCCACCGCTGTCGCCCACTGCAA
GCAAGGCAAGGGCATGATCCGGGTCAACGGCCAGCCCCTCTCTCTGGTCC
AGCCTGAGATCCTCCGCTTCAAGGTCTACGAGCCCCTCCTGATCGTTGGA
GCCGACAAGTTCGCCGGTGTCGACATCCGCGTCCGCGTCTCCGGTGGTGG
TCACACCTCCCAGGTTTACGCCATCCGTCAGGCCATCGCCAAGTCCATCG
TCGCCTACTACCAGAAGTACGTCGATGAGCACTCCAAGAACCAGCTGAAG
CAGGCTCTTGTCCAGTACGACCGCACACTCCTCGTCGCCGACAACCGTCG
TACGGAGCCCAAGAAGTTCGGTGGTCGTGGTGCCCGCGCTCGCTACCAGA
AGTCCTACCGTTAAATGGCTTCCGTCCCGAGTGTGCAATGCTTCGGCAAG
AAGAAGACGGCCACCGCTGTCGCCCACTGCAAGCAAGGCAAGGGCATGAT
CCGGGTCAACGGCCAGCCCCTCTCTCTGGTCCAGCCTGAGATCCTCCGCT
TCAAGGTCTACGAGCCCCTCCTGATCGTTGGAGCCGACAAGTTCGCCGGT
GTCGACATCCGCGTCCGCGTCTCCGGTGGTGGTCACACCTCCCAGGTTTA
CGCCATCCGTCAGGCCATCGCCAAGTCCATCGTCGCCTACTACCAGAAGT
ACGTCGATGAGCACTCCAAGAACCAGCTGAAGCAGGCTCTTGTCCAGTAC
GACCGCACACTCCTCGTCGCCGACAACCGTCGTACGGAGCCCAAGAAGTT
CGGTGGTCGTGGTGCCCGCGCTCGCTACCAGAAGTCCTACCGTTAAATGG
CTTCCGTCCCGAGTGTGCAATGCTTCGGCAAGAAGAAGACGGCCACCGCT
GTCGCCCACTGCAAGCAAGGCAAGGGCATGATCCGGGTCAACGGCCAGCC
CCTCTCTCTGGTCCAGCCTGAGATCCTCCGCTTCAAGGTCTACGAGCCCC
TCCTGATCGTTGGAGCCGACAAGTTCGCCGGTGTCGACATCCGCGTCCGC
GTCTCCGGTGGTGGTCACACCTCCCAGGTTTACGCCATCCGTCAGGCCAT
CGCCAAGTCCATCGTCGCCTACTACCAGAAGTACGTCGATGAGCACTCCA
AGAACCAGCTGAAGCAGGCTCTTGTCCAGTACGACCGCACACTCCTCGTC
GCCGACAACCGTCGTACGGAGCCCAAGAAGTTCGGTGGTCGTGGTGCCCG
CGCTCGCTACCAGAAGTCCTACCGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_292186M747DRAFT_292186Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292186-T1M747DRAFT_292186-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292186-T1.utr5p1M747DRAFT_292186-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292186-T1.exon1M747DRAFT_292186-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_292186-T1.exon2M747DRAFT_292186-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_292186-T1.exon3M747DRAFT_292186-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_292186-T1.exon4M747DRAFT_292186-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292186-T1.cdsM747DRAFT_292186-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292186-T1.utr3p1M747DRAFT_292186-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR020568
DBxrefInterPro:IPR020574
DBxrefInterPro:IPR000754
DBxrefInterPro:IPR014721
DBxrefPFAM:PF00380
Product40S ribosomal protein S16
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851900.1supercontigKZ851900.1:1449715..1451242 +
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