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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851900.1:1449715..1451242+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_292186-T1 ID=M747DRAFT_292186-T1|Name=M747DRAFT_292186-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1528bp|location=Sequence derived from alignment at KZ851900.1:1449715..1451242+ (Aspergillus niger ATCC 13496)
CGACCCCGACACCGTCTACCTTACTTCCCACCACCCAGCACACTTCGCCG
CCTCCCCATCATGGCTTCCGTCCCGAGTGTGCAATGCTTCGGCAAGAAGA
AGACGGGTGAGTTTTCCTCTATAATTTTGGTGGTGATATAAATGGGGTGG
ATTTGAAGATTGGAGGTTTGGATGGGATATGGTGTGACTTGGGATGCTAA
CGGTTGATGTGTTTTAGCCACCGCTGTCGCCCACTGCAAGGTATGAGAAT
TACATTCTCTGTCTATCTATATCTCCTGGTCTAGGATTATCGTGTTGCGG
ATGCCGATGTGTCGTTCGAATTGGTCAATATTGGTCTTGGAGGTTCGGAA
GGATCTGGGTATCATTCGACATTTAAGGAGGATTATGAAGCTTGTGGATT
GCCCGGAAGCACGGGGGAAGCGTTATCGAGTATCGAAACGAAGAACGACA
CGGCACAAGGAAATTTTGAAGGAAGATCAATTACGTGAAGGGAAAAGTGA
AGAAGACATGCGCAACCAAACCGAACGACACATCTGCATCCGCACCGCAT
ATATCAGATGAACCAGATCGCAACGGAAAGAAGGAGAACGTCAAAACTGA
TTCGTTTTTTCCCAACTACAGCAAGGCAAGGGCATGATCCGGGTCAACGG
CCAGCCCCTCTCTCTGGTCCAGCCTGAGATCCTCCGCTTCAAGGTACACT
CACCTACCCGTCGGGTTTTACGAAGTGCCATGGACGGGGTAATTGACAGG
ATTATTCAATGAAATAGGTCTACGAGCCCCTCCTGATCGTTGGAGCCGAC
AAGTTCGCCGGTGTCGACATCCGCGTCCGCGTCTCCGGTGGTGGTCACAC
CTCCCAGGTTTACGCCATCCGTCAGGCCATCGCCAAGTCCATCGTCGCCT
ACTACCAGAAGTACGTCGATGAGCACTCCAAGAACCAGCTGAAGCAGGCT
CTTGTCCAGTACGACCGCACACTCCTCGTCGCCGACAACCGTCGTACGGA
GCCCAAGAAGTTCGGTGGTCGTGGTGCCCGCGCTCGCTACCAGAAGTCCT
ACCGTTAAACGGCTTCATTATACATCAACAATATACACACATACAAGCTT
GCTCCGCCTCTCCTGTTTCCTGTCTCATTTCTTTGTTTCCCGTTCCGTTT
CCGTTTCGAAAGAAGGGAAATCATGGATTTGGGGGCCCCTCTTTTCCCGG
CTGTTATGCTTCCCCTTTTACGATTCGGGTTTTGCTTGCTTGGCTCGGGT
CGGTCTTAAAAAAGTTTTCCTATAACGTTCCCCCTCTTATGATTATGGCC
GGGTTATGAGGGTTGTTTTGTGGGGCAGAAATGGGATATTATGCGGGATG
GTGTTGTTGTTGCTGTTTGTCGTTTTAACGGTTGTACTTACTGGGGTGAG
GGAGAGAAGAAGAGAGAGATCTGGTGTGGTGGTCCCATTCCACCGCTGCA
GACAATTCAATCAAATAAGAGGATGGTTTGGGTTGTTTACAGTGGCTGTG
TTTGGAAATTATGGTGCAATGCTGGCCC back to topCoding sequence (CDS) from alignment at KZ851900.1:1449715..1451242+ >M747DRAFT_292186-T1 ID=M747DRAFT_292186-T1|Name=M747DRAFT_292186-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1728bp|location=Sequence derived from alignment at KZ851900.1:1449715..1451242+ (Aspergillus niger ATCC 13496)
ATGGCTTCCGTCCCGAGTGTGCAATGCTTCGGCAAGAAGAAGACGGCCAC
CGCTGTCGCCCACTGCAAGCAAGGCAAGGGCATGATCCGGGTCAACGGCC
AGCCCCTCTCTCTGGTCCAGCCTGAGATCCTCCGCTTCAAGGTCTACGAG
CCCCTCCTGATCGTTGGAGCCGACAAGTTCGCCGGTGTCGACATCCGCGT
CCGCGTCTCCGGTGGTGGTCACACCTCCCAGGTTTACGCCATCCGTCAGG
CCATCGCCAAGTCCATCGTCGCCTACTACCAGAAGTACGTCGATGAGCAC
TCCAAGAACCAGCTGAAGCAGGCTCTTGTCCAGTACGACCGCACACTCCT
CGTCGCCGACAACCGTCGTACGGAGCCCAAGAAGTTCGGTGGTCGTGGTG
CCCGCGCTCGCTACCAGAAGTCCTACCGTTAAATGGCTTCCGTCCCGAGT
GTGCAATGCTTCGGCAAGAAGAAGACGGCCACCGCTGTCGCCCACTGCAA
GCAAGGCAAGGGCATGATCCGGGTCAACGGCCAGCCCCTCTCTCTGGTCC
AGCCTGAGATCCTCCGCTTCAAGGTCTACGAGCCCCTCCTGATCGTTGGA
GCCGACAAGTTCGCCGGTGTCGACATCCGCGTCCGCGTCTCCGGTGGTGG
TCACACCTCCCAGGTTTACGCCATCCGTCAGGCCATCGCCAAGTCCATCG
TCGCCTACTACCAGAAGTACGTCGATGAGCACTCCAAGAACCAGCTGAAG
CAGGCTCTTGTCCAGTACGACCGCACACTCCTCGTCGCCGACAACCGTCG
TACGGAGCCCAAGAAGTTCGGTGGTCGTGGTGCCCGCGCTCGCTACCAGA
AGTCCTACCGTTAAATGGCTTCCGTCCCGAGTGTGCAATGCTTCGGCAAG
AAGAAGACGGCCACCGCTGTCGCCCACTGCAAGCAAGGCAAGGGCATGAT
CCGGGTCAACGGCCAGCCCCTCTCTCTGGTCCAGCCTGAGATCCTCCGCT
TCAAGGTCTACGAGCCCCTCCTGATCGTTGGAGCCGACAAGTTCGCCGGT
GTCGACATCCGCGTCCGCGTCTCCGGTGGTGGTCACACCTCCCAGGTTTA
CGCCATCCGTCAGGCCATCGCCAAGTCCATCGTCGCCTACTACCAGAAGT
ACGTCGATGAGCACTCCAAGAACCAGCTGAAGCAGGCTCTTGTCCAGTAC
GACCGCACACTCCTCGTCGCCGACAACCGTCGTACGGAGCCCAAGAAGTT
CGGTGGTCGTGGTGCCCGCGCTCGCTACCAGAAGTCCTACCGTTAAATGG
CTTCCGTCCCGAGTGTGCAATGCTTCGGCAAGAAGAAGACGGCCACCGCT
GTCGCCCACTGCAAGCAAGGCAAGGGCATGATCCGGGTCAACGGCCAGCC
CCTCTCTCTGGTCCAGCCTGAGATCCTCCGCTTCAAGGTCTACGAGCCCC
TCCTGATCGTTGGAGCCGACAAGTTCGCCGGTGTCGACATCCGCGTCCGC
GTCTCCGGTGGTGGTCACACCTCCCAGGTTTACGCCATCCGTCAGGCCAT
CGCCAAGTCCATCGTCGCCTACTACCAGAAGTACGTCGATGAGCACTCCA
AGAACCAGCTGAAGCAGGCTCTTGTCCAGTACGACCGCACACTCCTCGTC
GCCGACAACCGTCGTACGGAGCCCAAGAAGTTCGGTGGTCGTGGTGCCCG
CGCTCGCTACCAGAAGTCCTACCGTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR020568 |
| DBxref | InterPro:IPR020574 |
| DBxref | InterPro:IPR000754 |
| DBxref | InterPro:IPR014721 |
| DBxref | PFAM:PF00380 |
| Product | 40S ribosomal protein S16 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851900.1 | supercontig | KZ851900.1:1449715..1451242 + |
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