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M747DRAFT_292207-T1, M747DRAFT_292207-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_292207-T1
Unique NameM747DRAFT_292207-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851900.1:1523014..1524242+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_292207-T1 ID=M747DRAFT_292207-T1|Name=M747DRAFT_292207-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1229bp|location=Sequence derived from alignment at KZ851900.1:1523014..1524242+ (Aspergillus niger ATCC 13496)
CATCCCAGCAAACTACAGCAAGACTGTACCCATATATCTCGCTAGGAACA
CCACACCCATCCCCTCCTAGCCACCCACCGCATCTCTCTGCCTTACCACC
TCCGTCATCTCCTTTCCCCGCGGACACCTGGTAATGACGCTGCCTACCTC
CTAGCTCTAGCACCAAACAACCACAACCACTAACCAGGGATATTCACTAC
CAGATCCAGATTTCCTCAATTGACAACACAACAAACCCTTCCACAACCCA
ACTCAATTTATACACCCACCCCTAAACTTCCAGCACAGCAACAGCAACAA
TGGCCCAACTCAACTACCGCACAATCAACATCGATGTCCTGGACCCCGAG
TCCTCGATCAACTTCCCCATGGACACTCTCCTGCCGCCTACCCTCCCAGC
CCCGACGACCTCCGGCGCTGCGGCCTCCGTCGTTAACCAGGTGCGCCAGC
TCCTCCGCAGCGGCGACAACGAGGGAGCTCTGCGGTACGTGCTCGAGACG
GCGCCGCTGGGCGGCGATGACCGCGCGAAGGAGGTGCATCTGGCAGCTGT
CGTGGAGGTCTTGCAGGGTATTCGTCAAGGGGAGATGAGTCGCGTGTTGG
AGGCTGTGTGTACCGGTGAGGGTGGGTCGGAGAGAGCGGATTGTTTGATG
AAGTATTTGTATGGCTCCCTCTTCTTTGCTAGATGATGAGAAGTGGTTGT
TTTGGTGGTTGTGGATGTGCATGCTAATGACCTTTGTTGTATAGGTACAA
GGGCATGGCGGCGCCGACTCCTAGTAACGCGGCACAGTCGCCTCGCATGT
CGCCGCAGAGCACGGGATTTTCGCAGATTCAGGCCCGCAATCTGGGTGAG
GGAGGTGGCGGACAGCAGATGAGTGTGTTGTTGAACTGGCATGAGAAGTT
GGTGGAGGTTGCGGGGACGGGGTCCATTGTTAGGGTCATGACGGATCGGA
GGACTGTTTAAATCTTTTGATTCTCTGTTGTTGTGGTTTGGTTCGTTGTA
TGTTGAAGATGGAGGTGCGTTTTGTGTACTCATGTTCTTCGTCAGGATGA
TATCCTAGATGTCCCTTTTATTTTCCCTTTTCTCGTCAATATTATACAAG
CACCATGTTCTATACTATACATGAACCAACCCACTTGATCATGATCAATT
ACCTATGGAACCACCACCCAACAAATCCTTCAAGTTCAACTGTCCACTTC
CTCTCTCCAACGGCTTCGCCTGTCCCTCA
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Coding sequence (CDS) from alignment at KZ851900.1:1523014..1524242+

>M747DRAFT_292207-T1 ID=M747DRAFT_292207-T1|Name=M747DRAFT_292207-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1152bp|location=Sequence derived from alignment at KZ851900.1:1523014..1524242+ (Aspergillus niger ATCC 13496)
ATGGCCCAACTCAACTACCGCACAATCAACATCGATGTCCTGGACCCCGA
GTCCTCGATCAACTTCCCCATGGACACTCTCCTGCCGCCTACCCTCCCAG
CCCCGACGACCTCCGGCGCTGCGGCCTCCGTCGTTAACCAGGTGCGCCAG
CTCCTCCGCAGCGGCGACAACGAGGGAGCTCTGCGGTACGTGCTCGAGAC
GGCGCCGCTGGGCGGCGATGACCGCGCGAAGGAGGTGCATCTGGCAGCTG
TCGTGGAGGTCTTGCAGGGTATTCGTCAAGGGGAGATGAGTCGCGTGTTG
GAGGCTGTGTGTACCGGTGAGGGTGGGTCGGAGAGAGCGGATTGTTTGAT
GAAGTATTTGTACAAGGGCATGGCGGCGCCGACTCCTAGTAACGCGGCAC
AGTCGCCTCGCATGTCGCCGCAGAGCACGGGATTTTCGCAGATTCAGGCC
CGCAATCTGGGTGAGGGAGGTGGCGGACAGCAGATGAGTGTGTTGTTGAA
CTGGCATGAGAAGTTGGTGGAGGTTGCGGGGACGGGGTCCATTGTTAGGG
TCATGACGGATCGGAGGACTGTTTAAATGGCCCAACTCAACTACCGCACA
ATCAACATCGATGTCCTGGACCCCGAGTCCTCGATCAACTTCCCCATGGA
CACTCTCCTGCCGCCTACCCTCCCAGCCCCGACGACCTCCGGCGCTGCGG
CCTCCGTCGTTAACCAGGTGCGCCAGCTCCTCCGCAGCGGCGACAACGAG
GGAGCTCTGCGGTACGTGCTCGAGACGGCGCCGCTGGGCGGCGATGACCG
CGCGAAGGAGGTGCATCTGGCAGCTGTCGTGGAGGTCTTGCAGGGTATTC
GTCAAGGGGAGATGAGTCGCGTGTTGGAGGCTGTGTGTACCGGTGAGGGT
GGGTCGGAGAGAGCGGATTGTTTGATGAAGTATTTGTACAAGGGCATGGC
GGCGCCGACTCCTAGTAACGCGGCACAGTCGCCTCGCATGTCGCCGCAGA
GCACGGGATTTTCGCAGATTCAGGCCCGCAATCTGGGTGAGGGAGGTGGC
GGACAGCAGATGAGTGTGTTGTTGAACTGGCATGAGAAGTTGGTGGAGGT
TGCGGGGACGGGGTCCATTGTTAGGGTCATGACGGATCGGAGGACTGTTT
AA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015629actin cytoskeleton
GO:0005885Arp2/3 protein complex
Vocabulary: Biological Process
TermDefinition
GO:0034314Arp2/3 complex-mediated actin nucleation
GO:0030833regulation of actin filament polymerization
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_292207M747DRAFT_292207Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292207-T1M747DRAFT_292207-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292207-T1.utr5p1M747DRAFT_292207-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR
M747DRAFT_292207-T1.utr5p2M747DRAFT_292207-T1.utr5p2Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292207-T1.exon1M747DRAFT_292207-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_292207-T1.exon2M747DRAFT_292207-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_292207-T1.exon3M747DRAFT_292207-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292207-T1.cdsM747DRAFT_292207-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292207-T1.utr3p1M747DRAFT_292207-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264V51
DBxrefInterPro:IPR036743
DBxrefInterPro:IPR006789
DBxrefPFAM:PF04699
ProductArp2/3 complex 16 kDa subunit ARPC5
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851900.1supercontigKZ851900.1:1523014..1524242 +
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