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M747DRAFT_292429-T1, M747DRAFT_292429-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_292429-T1
Unique NameM747DRAFT_292429-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851901.1:656190..657287+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_292429-T1 ID=M747DRAFT_292429-T1|Name=M747DRAFT_292429-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1098bp|location=Sequence derived from alignment at KZ851901.1:656190..657287+ (Aspergillus niger ATCC 13496)
CAGAGCAGCACATCATGGCTCCCATCCCCCTCAGCACGGTCGACAGTGTG
TATTTATTTTCTCTAATTTAATGTGATCAGTTACTAACTCTATCTTCTGC
CCAGCCGACCTCAAAGACGTAATCCAACACCTCTTCGAAATCCAATCCGC
CGTTCACGGCTACCTCGGTCCCGAAACTCAACAAGAGCTCGTCCGCAAAA
TGTACCCTCCTTCCTATCCCTGCCATCTTCCTCACCTAAGATTCCACTCT
ACTAACGGATTACGTGTTATGCATTCAGAAAGAACCTCACCCTCGCGCTC
TCCACCCTCAGCACACACACCTCCGATAATCACCCCGACGCACAATCACA
ATCACCAGGAAACAGCAACGACCCTCCCATCCACAGCATCCAACTCCCCC
CCGAGATTATCGACTACGTAGATGCAGCAAGGAATCCGGATATCTACACA
AGAGAATTCGTGGAGTTGATCCAGCGCGGGAACCAGGATCTGAGGGGGAA
GAAGGAGGCGTTTGGGAGTTTCCGGGATGTGTTAGCGAGGGAGATGAGGG
GAGCGATGCCGGAGGTTAGGGGGGAGGTGGATAGAGTGGTTGCTTCGTTC
GGTGGTGATGGAAATGGGAATAATAATGGGGAGGGGAGGGGATGATGTTT
AGTTCATGATGATGGTTATGATCGAATAGAGGGATAGAACTATATTGGGA
TGGAGTTTGGGAGTGGAGTTATTTTTTGCTTGCTTTATTTTGGGGGGTTA
ATAATTATGATGAGTGATTTGTGATGATGGATGATGGAAGGAATGTGATG
ATCGGAATCCAATGCCGACTAGACTGAAACTCAGGTCAGCAAGCAAGTTC
AGCCTTGTGTGTGGCAGTGGCTGCTGCTGCTGCCCCCTGGAGTTATTATT
AACTCTTCAGACCAGGAGCAGAGGGATAAAAATAAAACTGAATGAATGAT
CGAAATAAAAATAATGGGATGCACGTGGGGATGCAAGGACTGTTTTTCTC
CTTTATTCTTCTCCTATATGATCTCATATGGAAGGGGAGGAGAGCAGGTA
TAGCAGGCATAACATAACCCTATGTGGGAGATCATCCACCAGAGTTAG
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Coding sequence (CDS) from alignment at KZ851901.1:656190..657287+

>M747DRAFT_292429-T1 ID=M747DRAFT_292429-T1|Name=M747DRAFT_292429-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1485bp|location=Sequence derived from alignment at KZ851901.1:656190..657287+ (Aspergillus niger ATCC 13496)
ATGGCTCCCATCCCCCTCAGCACGGTCGACACCGACCTCAAAGACGTAAT
CCAACACCTCTTCGAAATCCAATCCGCCGTTCACGGCTACCTCGGTCCCG
AAACTCAACAAGAGCTCGTCCGCAAAATAAAGAACCTCACCCTCGCGCTC
TCCACCCTCAGCACACACACCTCCGATAATCACCCCGACGCACAATCACA
ATCACCAGGAAACAGCAACGACCCTCCCATCCACAGCATCCAACTCCCCC
CCGAGATTATCGACTACGTAGATGCAGCAAGGAATCCGGATATCTACACA
AGAGAATTCGTGGAGTTGATCCAGCGCGGGAACCAGGATCTGAGGGGGAA
GAAGGAGGCGTTTGGGAGTTTCCGGGATGTGTTAGCGAGGGAGATGAGGG
GAGCGATGCCGGAGGTTAGGGGGGAGGTGGATAGAGTGGTTGCTTCGTTC
GGTGGTGATGGAAATGGGAATAATAATGGGGAGGGGAGGGGATGAATGGC
TCCCATCCCCCTCAGCACGGTCGACACCGACCTCAAAGACGTAATCCAAC
ACCTCTTCGAAATCCAATCCGCCGTTCACGGCTACCTCGGTCCCGAAACT
CAACAAGAGCTCGTCCGCAAAATAAAGAACCTCACCCTCGCGCTCTCCAC
CCTCAGCACACACACCTCCGATAATCACCCCGACGCACAATCACAATCAC
CAGGAAACAGCAACGACCCTCCCATCCACAGCATCCAACTCCCCCCCGAG
ATTATCGACTACGTAGATGCAGCAAGGAATCCGGATATCTACACAAGAGA
ATTCGTGGAGTTGATCCAGCGCGGGAACCAGGATCTGAGGGGGAAGAAGG
AGGCGTTTGGGAGTTTCCGGGATGTGTTAGCGAGGGAGATGAGGGGAGCG
ATGCCGGAGGTTAGGGGGGAGGTGGATAGAGTGGTTGCTTCGTTCGGTGG
TGATGGAAATGGGAATAATAATGGGGAGGGGAGGGGATGAATGGCTCCCA
TCCCCCTCAGCACGGTCGACACCGACCTCAAAGACGTAATCCAACACCTC
TTCGAAATCCAATCCGCCGTTCACGGCTACCTCGGTCCCGAAACTCAACA
AGAGCTCGTCCGCAAAATAAAGAACCTCACCCTCGCGCTCTCCACCCTCA
GCACACACACCTCCGATAATCACCCCGACGCACAATCACAATCACCAGGA
AACAGCAACGACCCTCCCATCCACAGCATCCAACTCCCCCCCGAGATTAT
CGACTACGTAGATGCAGCAAGGAATCCGGATATCTACACAAGAGAATTCG
TGGAGTTGATCCAGCGCGGGAACCAGGATCTGAGGGGGAAGAAGGAGGCG
TTTGGGAGTTTCCGGGATGTGTTAGCGAGGGAGATGAGGGGAGCGATGCC
GGAGGTTAGGGGGGAGGTGGATAGAGTGGTTGCTTCGTTCGGTGGTGATG
GAAATGGGAATAATAATGGGGAGGGGAGGGGATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016592mediator complex
Vocabulary: Molecular Function
TermDefinition
GO:0003712transcription coregulator activity
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NUT2M747DRAFT_292429Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292429-T1M747DRAFT_292429-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292429-T1.utr5p1M747DRAFT_292429-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292429-T1.exon1M747DRAFT_292429-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_292429-T1.exon2M747DRAFT_292429-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_292429-T1.exon3M747DRAFT_292429-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292429-T1.cdsM747DRAFT_292429-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292429-T1.utr3p1M747DRAFT_292429-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264V30
DBxrefInterPro:IPR019145
DBxrefPFAM:PF09748
ProductRNA polymerase II mediator complex subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851901.1supercontigKZ851901.1:656190..657287 +
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