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M747DRAFT_292683-T1, M747DRAFT_292683-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_292683-T1
Unique NameM747DRAFT_292683-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851902.1:346431..347675+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_292683-T1 ID=M747DRAFT_292683-T1|Name=M747DRAFT_292683-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1245bp|location=Sequence derived from alignment at KZ851902.1:346431..347675+ (Aspergillus niger ATCC 13496)
CTTGTTTCCTTTGCGCCCAGTTCTCCAGTCTTTTTTGGAGTCCCTGTGTG
ATACTCTCAACCTCAACCCCCAGAGTATCTTGTTCGCCAGTTGCGCGACC
AAAAGTTCAAAATGGCGTCTACCGACTCCAAGCCCAAGCCGGAGAGACTG
TAAGTCGAATCCACCCCCCATTTGCGTGGGGAAAGATTATCATCTATCTA
TACAAACTCCGTTAAACTTGAATAAACACCCATACTGATTCCTCAATGAT
GATACTATCAGGCCCGTGACAGTCTCTAAGCCGACCCCATACACATTCGA
CCTCGGTCATCTGCTTGCGAACGATCCCAACCCTCTCGAGATCTCCCGCT
CCGAACCCTTGGACGTCAGTCTCAAGGCCACAGCCCGGGATGGCACCCAG
TCTCTTCTCAACCAGCTCCTGACCACCTGCCCCATCACCTCCTCCCAACA
GGGTGTTCTCCTGACTCTCCCGTCTCCCTCCACTGTCCTCCCGCGCTTCA
AGCCTCTTCCCACCCCCAAGCCCCCGACTAAGTGGGAGCTGTTCGCCCGC
AAGAAGGGTATTGGCAAATACAGCAGCAGGCCTGGCGCAGCATTGGCCGA
TAAGGAGCGTCGCAAGAAGTTGGTGTACGATGAAGAGAAGGGCGAGTGGG
TTCCTCGCTGGGGTTACAAGGGCAAGAACAAGTCCGATGATGAATGGCTT
GTTGAGGTGAACGAGAAGGATTGGAAGAAGGAAGAAGAGGCGGCCGCTAA
GGGAAGCTCGATCCGTGGACTATCTCGCGCCGAACGCAAAGACAGGATAC
GCCGCAACGAGAGGAAAATGAGAGCGAATGAGCGCAAGAACAGGAAGTCG
GGTGGTGGTTAAAATATACTGATGATGTGTATTATGTGCTGTGTGTGTTG
TTGTGTCTGATAACGATTTTTGTCAAGAGTCGAGGCCGTATAACAAGTTT
TTGCGGATCTTGCCTTGGTTTTAATTTTTCGTTCTTTCACTGGGGCTCAA
ATGTTAAGGCGTTCGGTTTGGAGTCGCTGGGCTTGGATGTCTGTCAATGT
TGCCTTTGGTTTGGGACTTGTTCGTCTCGCCGGGCTCGAAAAGCAATATC
ACATTTTACTACCCCTCTAAGTATTTGTCTTATTTCTTGATCTTCTATGG
GGTCCGCACCATAACTGGGGCTAATGCTCGACTTCACATGTACTACTTGT
TCACTTGTAGATACGCCTCTATACTCAAATACAAATAGACCATCC
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Coding sequence (CDS) from alignment at KZ851902.1:346431..347675+

>M747DRAFT_292683-T1 ID=M747DRAFT_292683-T1|Name=M747DRAFT_292683-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1278bp|location=Sequence derived from alignment at KZ851902.1:346431..347675+ (Aspergillus niger ATCC 13496)
ATGGCGTCTACCGACTCCAAGCCCAAGCCGGAGAGACTGCCCGTGACAGT
CTCTAAGCCGACCCCATACACATTCGACCTCGGTCATCTGCTTGCGAACG
ATCCCAACCCTCTCGAGATCTCCCGCTCCGAACCCTTGGACGTCAGTCTC
AAGGCCACAGCCCGGGATGGCACCCAGTCTCTTCTCAACCAGCTCCTGAC
CACCTGCCCCATCACCTCCTCCCAACAGGGTGTTCTCCTGACTCTCCCGT
CTCCCTCCACTGTCCTCCCGCGCTTCAAGCCTCTTCCCACCCCCAAGCCC
CCGACTAAGTGGGAGCTGTTCGCCCGCAAGAAGGGTATTGGCAAATACAG
CAGCAGGCCTGGCGCAGCATTGGCCGATAAGGAGCGTCGCAAGAAGTTGG
TGTACGATGAAGAGAAGGGCGAGTGGGTTCCTCGCTGGGGTTACAAGGGC
AAGAACAAGTCCGATGATGAATGGCTTGTTGAGGTGAACGAGAAGGATTG
GAAGAAGGAAGAAGAGGCGGCCGCTAAGGGAAGCTCGATCCGTGGACTAT
CTCGCGCCGAACGCAAAGACAGGATACGCCGCAACGAGAGGAAAATGAGA
GCGAATGAGCGCAAGAACAGGAAGTCGGGTGGTGGTTAAATGGCGTCTAC
CGACTCCAAGCCCAAGCCGGAGAGACTGCCCGTGACAGTCTCTAAGCCGA
CCCCATACACATTCGACCTCGGTCATCTGCTTGCGAACGATCCCAACCCT
CTCGAGATCTCCCGCTCCGAACCCTTGGACGTCAGTCTCAAGGCCACAGC
CCGGGATGGCACCCAGTCTCTTCTCAACCAGCTCCTGACCACCTGCCCCA
TCACCTCCTCCCAACAGGGTGTTCTCCTGACTCTCCCGTCTCCCTCCACT
GTCCTCCCGCGCTTCAAGCCTCTTCCCACCCCCAAGCCCCCGACTAAGTG
GGAGCTGTTCGCCCGCAAGAAGGGTATTGGCAAATACAGCAGCAGGCCTG
GCGCAGCATTGGCCGATAAGGAGCGTCGCAAGAAGTTGGTGTACGATGAA
GAGAAGGGCGAGTGGGTTCCTCGCTGGGGTTACAAGGGCAAGAACAAGTC
CGATGATGAATGGCTTGTTGAGGTGAACGAGAAGGATTGGAAGAAGGAAG
AAGAGGCGGCCGCTAAGGGAAGCTCGATCCGTGGACTATCTCGCGCCGAA
CGCAAAGACAGGATACGCCGCAACGAGAGGAAAATGAGAGCGAATGAGCG
CAAGAACAGGAAGTCGGGTGGTGGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0042254ribosome biogenesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_292683M747DRAFT_292683Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292683-T1.utr5p1M747DRAFT_292683-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292683-T1.exon1M747DRAFT_292683-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_292683-T1.exon2M747DRAFT_292683-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292683-T1.cdsM747DRAFT_292683-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292683-T1.utr3p1M747DRAFT_292683-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292683-T1M747DRAFT_292683-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007023
DBxrefPFAM:PF04939
Productribosomal biogenesis regulatory protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851902.1supercontigKZ851902.1:346431..347675 +
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