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M747DRAFT_292927-T1, M747DRAFT_292927-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_292927-T1
Unique NameM747DRAFT_292927-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851903.1:198915..200232+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_292927-T1 ID=M747DRAFT_292927-T1|Name=M747DRAFT_292927-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1318bp|location=Sequence derived from alignment at KZ851903.1:198915..200232+ (Aspergillus niger ATCC 13496)
CCCGTTTCGACCGTCCGTCCGTCCCCCTTCCCTTGTCGCCCAGTTTTTAT
CCGACAACCCTAGATACACAGCCAAGATGTCTGCGAGAGGGTGAGTTGTT
TCTTTTCGTTGTTGGAGACGTGTGGGAAAGCGAGACAGAGAAAGAGAGGA
AGAAATCCGGACCGGAGATATTGAAATGCTGCGGGAAAGAGATGAGATGA
GAAGGGATGGAATGGAATATTCGCTGGCTGGAGATTTCGACTCGAAATTA
CGGTTGGATTGAGTTCGATATGCGACATACGAGATTGAAAGAGGAGGGTT
GAATGAAGGTCCGGGAAAGAGATGGATAAATCTATGTGGATGGGAATTTG
ATATACATGGGATACGAGGGAATTAAAGCTAACAAAATATCTATAACAGA
CGCGGTGGTGCCTCCGGCAACAAGCTCAAGATGACCCTCGGTCTGCCTTG
GTATGTCAACTCCAAATTTCTTCCGTTCAAATCCATACACCCATCTTCGA
GAGAATTATGCGATTCGATACAATTAAATCAAATCAAATCGATCTCAATT
ATTCTTCAATCGAAACATACACCCACCACACACAAGCCACCTCGATATCT
TCCCACCCAACACCCATGATTTCACAACCTACAACCGACACGAACACATG
AAGAAAAAAATGATGAACACAGCTAATTAATCTTTTTGCCTACAGCGGCG
CCGTGCTCAACTGCTGCGACAACTCCGGTGCCCGCAACCTGTACATCATC
TCCGTCAAGGGTATCGGTGCTCGCCTGAACCGTCTCCCCGCTGCCGGTGT
CGGTGACATGGTCATGGCCACCGTCAAGAAGGGAAAGCCTGAGCTCCGTA
AGAAGGTCATGCCCGCTGTTGTTGTCCGTCAGAGCAAGCCCTGGAGACGC
CCCGACGGTATCTACCTCTACTTCGAGGACAACGCTGGTGTTGTACGTAC
CCTTGTCCCCGAATTCCAATTCCACTCTTTATATCAAGTGGATGAGGGTC
ATATGCGACAATAATGATGGAAATACTAATGATCGGTATAGATCGTCAAC
GCCAAGGGTGAGATGAAGGGTTCCGCTATCACTGGTCCCGTTGGTAAGGA
GGCTGCTGAGCTTTGGCCTGTAAGTTCTCCCTAGCATACCTCAACGGGTA
TATATCAATGGGGAGATTCATATGCTAATTGTGTGTCCAGCGTATTGCCT
CCAACTCCGGTGTTGTCATGTAAAATGTGTTAAACCTGGAATTTGGAGCA
AGAAGAGAAAAAAAAAAAGCGATACCAAGGGCTTCTAGAACAAAGGGGGT
GGTACCGGTTTTTTTTTT
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Coding sequence (CDS) from alignment at KZ851903.1:198915..200232+

>M747DRAFT_292927-T1 ID=M747DRAFT_292927-T1|Name=M747DRAFT_292927-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2115bp|location=Sequence derived from alignment at KZ851903.1:198915..200232+ (Aspergillus niger ATCC 13496)
ATGTCTGCGAGAGGACGCGGTGGTGCCTCCGGCAACAAGCTCAAGATGAC
CCTCGGTCTGCCTTGCGGCGCCGTGCTCAACTGCTGCGACAACTCCGGTG
CCCGCAACCTGTACATCATCTCCGTCAAGGGTATCGGTGCTCGCCTGAAC
CGTCTCCCCGCTGCCGGTGTCGGTGACATGGTCATGGCCACCGTCAAGAA
GGGAAAGCCTGAGCTCCGTAAGAAGGTCATGCCCGCTGTTGTTGTCCGTC
AGAGCAAGCCCTGGAGACGCCCCGACGGTATCTACCTCTACTTCGAGGAC
AACGCTGGTGTTATCGTCAACGCCAAGGGTGAGATGAAGGGTTCCGCTAT
CACTGGTCCCGTTGGTAAGGAGGCTGCTGAGCTTTGGCCTCGTATTGCCT
CCAACTCCGGTGTTGTCATGTAAATGTCTGCGAGAGGACGCGGTGGTGCC
TCCGGCAACAAGCTCAAGATGACCCTCGGTCTGCCTTGCGGCGCCGTGCT
CAACTGCTGCGACAACTCCGGTGCCCGCAACCTGTACATCATCTCCGTCA
AGGGTATCGGTGCTCGCCTGAACCGTCTCCCCGCTGCCGGTGTCGGTGAC
ATGGTCATGGCCACCGTCAAGAAGGGAAAGCCTGAGCTCCGTAAGAAGGT
CATGCCCGCTGTTGTTGTCCGTCAGAGCAAGCCCTGGAGACGCCCCGACG
GTATCTACCTCTACTTCGAGGACAACGCTGGTGTTATCGTCAACGCCAAG
GGTGAGATGAAGGGTTCCGCTATCACTGGTCCCGTTGGTAAGGAGGCTGC
TGAGCTTTGGCCTCGTATTGCCTCCAACTCCGGTGTTGTCATGTAAATGT
CTGCGAGAGGACGCGGTGGTGCCTCCGGCAACAAGCTCAAGATGACCCTC
GGTCTGCCTTGCGGCGCCGTGCTCAACTGCTGCGACAACTCCGGTGCCCG
CAACCTGTACATCATCTCCGTCAAGGGTATCGGTGCTCGCCTGAACCGTC
TCCCCGCTGCCGGTGTCGGTGACATGGTCATGGCCACCGTCAAGAAGGGA
AAGCCTGAGCTCCGTAAGAAGGTCATGCCCGCTGTTGTTGTCCGTCAGAG
CAAGCCCTGGAGACGCCCCGACGGTATCTACCTCTACTTCGAGGACAACG
CTGGTGTTATCGTCAACGCCAAGGGTGAGATGAAGGGTTCCGCTATCACT
GGTCCCGTTGGTAAGGAGGCTGCTGAGCTTTGGCCTCGTATTGCCTCCAA
CTCCGGTGTTGTCATGTAAATGTCTGCGAGAGGACGCGGTGGTGCCTCCG
GCAACAAGCTCAAGATGACCCTCGGTCTGCCTTGCGGCGCCGTGCTCAAC
TGCTGCGACAACTCCGGTGCCCGCAACCTGTACATCATCTCCGTCAAGGG
TATCGGTGCTCGCCTGAACCGTCTCCCCGCTGCCGGTGTCGGTGACATGG
TCATGGCCACCGTCAAGAAGGGAAAGCCTGAGCTCCGTAAGAAGGTCATG
CCCGCTGTTGTTGTCCGTCAGAGCAAGCCCTGGAGACGCCCCGACGGTAT
CTACCTCTACTTCGAGGACAACGCTGGTGTTATCGTCAACGCCAAGGGTG
AGATGAAGGGTTCCGCTATCACTGGTCCCGTTGGTAAGGAGGCTGCTGAG
CTTTGGCCTCGTATTGCCTCCAACTCCGGTGTTGTCATGTAAATGTCTGC
GAGAGGACGCGGTGGTGCCTCCGGCAACAAGCTCAAGATGACCCTCGGTC
TGCCTTGCGGCGCCGTGCTCAACTGCTGCGACAACTCCGGTGCCCGCAAC
CTGTACATCATCTCCGTCAAGGGTATCGGTGCTCGCCTGAACCGTCTCCC
CGCTGCCGGTGTCGGTGACATGGTCATGGCCACCGTCAAGAAGGGAAAGC
CTGAGCTCCGTAAGAAGGTCATGCCCGCTGTTGTTGTCCGTCAGAGCAAG
CCCTGGAGACGCCCCGACGGTATCTACCTCTACTTCGAGGACAACGCTGG
TGTTATCGTCAACGCCAAGGGTGAGATGAAGGGTTCCGCTATCACTGGTC
CCGTTGGTAAGGAGGCTGCTGAGCTTTGGCCTCGTATTGCCTCCAACTCC
GGTGTTGTCATGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL23M747DRAFT_292927Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292927-T1M747DRAFT_292927-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292927-T1.utr5p1M747DRAFT_292927-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292927-T1.exon1M747DRAFT_292927-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_292927-T1.exon2M747DRAFT_292927-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_292927-T1.exon3M747DRAFT_292927-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_292927-T1.exon4M747DRAFT_292927-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_292927-T1.exon5M747DRAFT_292927-T1.exon5Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292927-T1.cdsM747DRAFT_292927-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292927-T1.utr3p1M747DRAFT_292927-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09265CQO
DBxrefInterPro:IPR019972
DBxrefInterPro:IPR036853
DBxrefInterPro:IPR000218
DBxrefPFAM:PF00238
Product60S ribosomal protein L23
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851903.1supercontigKZ851903.1:198915..200232 +
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