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M747DRAFT_293319-T1, M747DRAFT_293319-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_293319-T1
Unique NameM747DRAFT_293319-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851904.1:391416..392781+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_293319-T1 ID=M747DRAFT_293319-T1|Name=M747DRAFT_293319-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1366bp|location=Sequence derived from alignment at KZ851904.1:391416..392781+ (Aspergillus niger ATCC 13496)
AGCCAATTTTATCCATCAGTTCGGTACGTATAGAGACCCCCTATTGTGAA
TTTATATCACCAGTCGATCTTCCCTGGTTGCGAAAAGAAAAGAAAAAGAC
ACGAGAAATTTCCCTACGCACAAAGTCCGCCTATATAACCCCGAATCTTG
AAATCCGCATCATGTCCGCCACCAGAACCCTGCAACTTCAGCTTCTTCCG
AACACCACCCATATATTGGAAAATACATAATTCTAACGGAAATTCTTGCT
CTACAGTTCACCCTCCTTCGAACATAATCCGACAAGATGGGTAAGGGACA
GCCCCGTGGTTTGAACGCCGCCCGCAAGCTCGCGACCACCCGTCGCGAGA
ACCGCTGGGCCGATCTGCACTACAAGAAGCGCCTCCTCGGTACTGCCTAC
AAGTCCTCTCCCTTCGGAGGTGCCTCCCACGCCAAGGGTATCGTTCTTGA
GAAGGTCGGTGTTGAGGCCAAGCAGCCCAACTCCGCTATTCGCAAGTGTG
TCAAGGTCCAGCTCATCAAGAACGGCAAGAAGGTTACCGCTTTCGGTGGG
TGATCCTATCCTTTTCTTTTTCTATTTCCCGGTTGTGATGGATGTTTATG
GTTTGGGGATTTTGTGATGGGATATTGTGCGGAGAATGGAGCAGAAGAAG
GAGAAGGGAATAAAGGACGGAGTGGCAAACGGGAAATATCGCATATTCTT
TAAGAGGGTATCGATTGGCTAACATATTTCCTGTATAGTCCCCAACGATG
GTTGCTTGAACTTCATCGATGAGAACGACGAGGTCCTCCTCGCCGGTTTC
GGTCGTAAGGGCAAGGCCAAGGGTGATATTCCCGGTGTCCGTTTCAAGGT
CGTCAAGGTTTCCGGTGTCGGTCTGCTCGCTCTCTGGAAGGAGAAGAAGG
AGAAGCCCCGCTCTTAAATAACCCAAACCCTGGGGAATTTAATAAAGATG
CTATTAGCGGGGTGGAAGGGGGCCCATTCCATGGAAGAAGCTTCGGGGCA
AAGGCAAAGCAAACACAAGTCTATGGTCTGGAATTGATGGTTCAGGACGG
ATGAGACCCTGCAAAATAAATACCATTTGCAGCGTACTACGATTGATATA
TCCATAAAAGATGGCGCCATGATTTATTTCTTTGGGAGGGCCCTAAAATT
CAAATCCTTCAAAAAAATGAGTCTAGCTCTTGTCGTAATTGTTTCGTAAA
TTTAATAAATTTTTAAGTTTGCTACAATTCGCTGATCTAGAACGCGTGGA
CTATCTACGTTGGTTGGATGCATCAATCGATAAGGACTGATCTCATTCAT
AAAGATTATCCTAGTATCTCCGCGGGTATCGTTGCGTTCCATTGTCTATG
CCCTTACGCCTTACTC
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Coding sequence (CDS) from alignment at KZ851904.1:391416..392781+

>M747DRAFT_293319-T1 ID=M747DRAFT_293319-T1|Name=M747DRAFT_293319-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=876bp|location=Sequence derived from alignment at KZ851904.1:391416..392781+ (Aspergillus niger ATCC 13496)
ATGGGTAAGGGACAGCCCCGTGGTTTGAACGCCGCCCGCAAGCTCGCGAC
CACCCGTCGCGAGAACCGCTGGGCCGATCTGCACTACAAGAAGCGCCTCC
TCGGTACTGCCTACAAGTCCTCTCCCTTCGGAGGTGCCTCCCACGCCAAG
GGTATCGTTCTTGAGAAGGTCGGTGTTGAGGCCAAGCAGCCCAACTCCGC
TATTCGCAAGTGTGTCAAGGTCCAGCTCATCAAGAACGGCAAGAAGGTTA
CCGCTTTCGTCCCCAACGATGGTTGCTTGAACTTCATCGATGAGAACGAC
GAGGTCCTCCTCGCCGGTTTCGGTCGTAAGGGCAAGGCCAAGGGTGATAT
TCCCGGTGTCCGTTTCAAGGTCGTCAAGGTTTCCGGTGTCGGTCTGCTCG
CTCTCTGGAAGGAGAAGAAGGAGAAGCCCCGCTCTTAAATGGGTAAGGGA
CAGCCCCGTGGTTTGAACGCCGCCCGCAAGCTCGCGACCACCCGTCGCGA
GAACCGCTGGGCCGATCTGCACTACAAGAAGCGCCTCCTCGGTACTGCCT
ACAAGTCCTCTCCCTTCGGAGGTGCCTCCCACGCCAAGGGTATCGTTCTT
GAGAAGGTCGGTGTTGAGGCCAAGCAGCCCAACTCCGCTATTCGCAAGTG
TGTCAAGGTCCAGCTCATCAAGAACGGCAAGAAGGTTACCGCTTTCGTCC
CCAACGATGGTTGCTTGAACTTCATCGATGAGAACGACGAGGTCCTCCTC
GCCGGTTTCGGTCGTAAGGGCAAGGCCAAGGGTGATATTCCCGGTGTCCG
TTTCAAGGTCGTCAAGGTTTCCGGTGTCGGTCTGCTCGCTCTCTGGAAGG
AGAAGAAGGAGAAGCCCCGCTCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015935small ribosomal subunit
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS23M747DRAFT_293319Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293319-T1M747DRAFT_293319-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293319-T1.utr5p1M747DRAFT_293319-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR
M747DRAFT_293319-T1.utr5p2M747DRAFT_293319-T1.utr5p2Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293319-T1.exon1M747DRAFT_293319-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_293319-T1.exon2M747DRAFT_293319-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_293319-T1.exon3M747DRAFT_293319-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293319-T1.cdsM747DRAFT_293319-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293319-T1.utr3p1M747DRAFT_293319-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR005680
DBxrefInterPro:IPR006032
DBxrefPFAM:PF00164
Product40S ribosomal protein S23
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851904.1supercontigKZ851904.1:391416..392781 +
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