You are here

Home

M747DRAFT_293952-T1, M747DRAFT_293952-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_293952-T1
Unique NameM747DRAFT_293952-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851906.1:578857..580446-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_293952-T1 ID=M747DRAFT_293952-T1|Name=M747DRAFT_293952-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1590bp|location=Sequence derived from alignment at KZ851906.1:578857..580446- (Aspergillus niger ATCC 13496)
GTTTCACCTAAAATGTCCGATGGGGGCGCCATCATTTTCAGCGCCAAAAA
CCTGTCATCTCACCTTTCATTCATTGTCCTCAATTCATGCCTTTCGGGGG
CCAGTATATAACCCTTCAAGGCCCCATCCGGCTGGTCTCGGATGGTTCGG
TGTTGACTCCCAGCTTCTGGAAAGCCTGTCGCCTCGTCTTTCGTTTCCCA
ACTTCTTGTCGTTCCTTTATCGTTTCTCAATCCTTTACCGCCATGTTCGG
AACTACTGCTTCTCGCCTCATCCTGGGGATGCTCAGCTGTGTGGCCCTCC
TGCCCAGCCAGGCTTTGGCGGCACACCAGCACATCGGTCACCGCCACCAT
CATCCCTTCAATCCCACCCAGCAACCCCAGGCCAGCACGCTCATCACTGT
CGCTCAGGGTAGCGCTGCCACTGAAGCCCCTTCCGCATGCTACTGGGCCC
CATCTGCCGTATCTTCAGTGATTGCCTCGGCCTCGGCGGAGGCCTCGGCG
GTAACTCAGAGCAACATCACCGCCAAGGTCATCATCCCATTCTACGTCTA
TCCTGAAGATGGTGCCTGGACCCCCATGGAAGAGCTGTACGTTGTAACAC
GATGACTCAAATCTCTCAATCACTAACCTCCCCAGCGTCGCCGCCTTCCC
CAATGTCCACTTCACCATCATCATCAACCCCGATAGCGGTCCCGGCTCTA
GCAGTCTCCCAGACAGCAGCTTCCTGACCGCCGTCCCCAGGCTCACCAGC
TACAGCAACGTGCTCGCCATCGGCTACGTCCCGACAGAGAAGGGCACCCG
CGCCATTTCAGACGTCGAAAGCGACATCAAGACCTACGCCGGCTGGCCTT
CCGCCTCCGGCAACTCCTCTTTCGCCGTGCACGGCATCTTCCTCGATGAA
GCCCCCAACGCCTACAGCGAGGAGCTGGTTTCGTACTACCAGCAACTAAC
CACTCTCATCAAAGAGAGTTCCGGCCTGGGACCGGAGAATTTTGTATGTC
CTGTCCTCACCCTACCACCTCGCTTCCGCTGTAACTAATTAATGATATGT
ATAGGTGGTGACCAACCCCGGCACAGTCCCTGACTCCGCCTACCTCAGCA
TTCCCGACTCCACGGTGGTCTTCGAGTCGCCCTACGACTCGTTCATGAGC
GCCGTGTCAGCAGACTCGTTCGCTAGCATTAGGGGCGGAAACCACAGCGC
TCTGGCTACCATGGTCTACTCGGTCCCGGATACTGTGCATCTCCCGACCC
TGATTAGCCAGGTCGGGAATATCTCGGACCAGATCTTCCTGGGCAATACG
AGTTCGTATACGGTGTATAACTCGTACATGAACCAGGTTATTCCATTGTT
GTTGCCTGCTTCTTCTTAGGAGTGGCTGGCTGACTTTACTGTCGCGGGCG
ATGGGTTAGATAGATGGTGTGTTTCAATTCTTGTCTCTCGTTTATTCACC
GTTTTATGTATATAGATGTGTATGTTGTGGAACAATGTGCATTTTTGACC
AGTATCATATGTTGGCAGGCTCCAGATTAGGCAGTAGTCGAAGATGCAAT
GTAGGTAGGCTGCGGCGCCACCCGTGAATTCCCTCAGCTG
back to top

Coding sequence (CDS) from alignment at KZ851906.1:578857..580446-

>M747DRAFT_293952-T1 ID=M747DRAFT_293952-T1|Name=M747DRAFT_293952-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3051bp|location=Sequence derived from alignment at KZ851906.1:578857..580446- (Aspergillus niger ATCC 13496)
GTGGTGACCAACCCCGGCACAGTCCCTGACTCCGCCTACCTCAGCATTCC
CGACTCCACGGTGGTCTTCGAGTCGCCCTACGACTCGTTCATGAGCGCCG
TGTCAGCAGACTCGTTCGCTAGCATTAGGGGCGGAAACCACAGCGCTCTG
GCTACCATGGTCTACTCGGTCCCGGATACTGTGCATCTCCCGACCCTGAT
TAGCCAGGTCGGGAATATCTCGGACCAGATCTTCCTGGGCAATACGAGTT
CGTATACGGTGTATAACTCGTACATGAACCAGGTTATTCCATTGTTGTTG
CCTGCTTCTTCTTAGCGTCGCCGCCTTCCCCAATGTCCACTTCACCATCA
TCATCAACCCCGATAGCGGTCCCGGCTCTAGCAGTCTCCCAGACAGCAGC
TTCCTGACCGCCGTCCCCAGGCTCACCAGCTACAGCAACGTGCTCGCCAT
CGGCTACGTCCCGACAGAGAAGGGCACCCGCGCCATTTCAGACGTCGAAA
GCGACATCAAGACCTACGCCGGCTGGCCTTCCGCCTCCGGCAACTCCTCT
TTCGCCGTGCACGGCATCTTCCTCGATGAAGCCCCCAACGCCTACAGCGA
GGAGCTGGTTTCGTACTACCAGCAACTAACCACTCTCATCAAAGAGAGTT
CCGGCCTGGGACCGGAGAATTTTATGTTCGGAACTACTGCTTCTCGCCTC
ATCCTGGGGATGCTCAGCTGTGTGGCCCTCCTGCCCAGCCAGGCTTTGGC
GGCACACCAGCACATCGGTCACCGCCACCATCATCCCTTCAATCCCACCC
AGCAACCCCAGGCCAGCACGCTCATCACTGTCGCTCAGGGTAGCGCTGCC
ACTGAAGCCCCTTCCGCATGCTACTGGGCCCCATCTGCCGTATCTTCAGT
GATTGCCTCGGCCTCGGCGGAGGCCTCGGCGGTAACTCAGAGCAACATCA
CCGCCAAGGTCATCATCCCATTCTACGTCTATCCTGAAGATGGTGCCTGG
ACCCCCATGGAAGAGCTGTGGTGACCAACCCCGGCACAGTCCCTGACTCC
GCCTACCTCAGCATTCCCGACTCCACGGTGGTCTTCGAGTCGCCCTACGA
CTCGTTCATGAGCGCCGTGTCAGCAGACTCGTTCGCTAGCATTAGGGGCG
GAAACCACAGCGCTCTGGCTACCATGGTCTACTCGGTCCCGGATACTGTG
CATCTCCCGACCCTGATTAGCCAGGTCGGGAATATCTCGGACCAGATCTT
CCTGGGCAATACGAGTTCGTATACGGTGTATAACTCGTACATGAACCAGG
TTATTCCATTGTTGTTGCCTGCTTCTTCTTAGCGTCGCCGCCTTCCCCAA
TGTCCACTTCACCATCATCATCAACCCCGATAGCGGTCCCGGCTCTAGCA
GTCTCCCAGACAGCAGCTTCCTGACCGCCGTCCCCAGGCTCACCAGCTAC
AGCAACGTGCTCGCCATCGGCTACGTCCCGACAGAGAAGGGCACCCGCGC
CATTTCAGACGTCGAAAGCGACATCAAGACCTACGCCGGCTGGCCTTCCG
CCTCCGGCAACTCCTCTTTCGCCGTGCACGGCATCTTCCTCGATGAAGCC
CCCAACGCCTACAGCGAGGAGCTGGTTTCGTACTACCAGCAACTAACCAC
TCTCATCAAAGAGAGTTCCGGCCTGGGACCGGAGAATTTTATGTTCGGAA
CTACTGCTTCTCGCCTCATCCTGGGGATGCTCAGCTGTGTGGCCCTCCTG
CCCAGCCAGGCTTTGGCGGCACACCAGCACATCGGTCACCGCCACCATCA
TCCCTTCAATCCCACCCAGCAACCCCAGGCCAGCACGCTCATCACTGTCG
CTCAGGGTAGCGCTGCCACTGAAGCCCCTTCCGCATGCTACTGGGCCCCA
TCTGCCGTATCTTCAGTGATTGCCTCGGCCTCGGCGGAGGCCTCGGCGGT
AACTCAGAGCAACATCACCGCCAAGGTCATCATCCCATTCTACGTCTATC
CTGAAGATGGTGCCTGGACCCCCATGGAAGAGCTGTGGTGACCAACCCCG
GCACAGTCCCTGACTCCGCCTACCTCAGCATTCCCGACTCCACGGTGGTC
TTCGAGTCGCCCTACGACTCGTTCATGAGCGCCGTGTCAGCAGACTCGTT
CGCTAGCATTAGGGGCGGAAACCACAGCGCTCTGGCTACCATGGTCTACT
CGGTCCCGGATACTGTGCATCTCCCGACCCTGATTAGCCAGGTCGGGAAT
ATCTCGGACCAGATCTTCCTGGGCAATACGAGTTCGTATACGGTGTATAA
CTCGTACATGAACCAGGTTATTCCATTGTTGTTGCCTGCTTCTTCTTAGC
GTCGCCGCCTTCCCCAATGTCCACTTCACCATCATCATCAACCCCGATAG
CGGTCCCGGCTCTAGCAGTCTCCCAGACAGCAGCTTCCTGACCGCCGTCC
CCAGGCTCACCAGCTACAGCAACGTGCTCGCCATCGGCTACGTCCCGACA
GAGAAGGGCACCCGCGCCATTTCAGACGTCGAAAGCGACATCAAGACCTA
CGCCGGCTGGCCTTCCGCCTCCGGCAACTCCTCTTTCGCCGTGCACGGCA
TCTTCCTCGATGAAGCCCCCAACGCCTACAGCGAGGAGCTGGTTTCGTAC
TACCAGCAACTAACCACTCTCATCAAAGAGAGTTCCGGCCTGGGACCGGA
GAATTTTATGTTCGGAACTACTGCTTCTCGCCTCATCCTGGGGATGCTCA
GCTGTGTGGCCCTCCTGCCCAGCCAGGCTTTGGCGGCACACCAGCACATC
GGTCACCGCCACCATCATCCCTTCAATCCCACCCAGCAACCCCAGGCCAG
CACGCTCATCACTGTCGCTCAGGGTAGCGCTGCCACTGAAGCCCCTTCCG
CATGCTACTGGGCCCCATCTGCCGTATCTTCAGTGATTGCCTCGGCCTCG
GCGGAGGCCTCGGCGGTAACTCAGAGCAACATCACCGCCAAGGTCATCAT
CCCATTCTACGTCTATCCTGAAGATGGTGCCTGGACCCCCATGGAAGAGC
T
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_293952M747DRAFT_293952Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293952-T1M747DRAFT_293952-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293952-T1.cdsM747DRAFT_293952-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293952-T1.utr3p1M747DRAFT_293952-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293952-T1.exon3M747DRAFT_293952-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_293952-T1.exon2M747DRAFT_293952-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_293952-T1.exon1M747DRAFT_293952-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293952-T1.utr5p1M747DRAFT_293952-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-26)
NoteCAZy:GH135
DBxrefInterPro:IPR021986
DBxrefPFAM:PF12138
Productspherulin 4-like cell surface protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851906.1supercontigKZ851906.1:578857..580446 -
Powered by Drupal