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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851907.1:639637..640909+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_294199-T1 ID=M747DRAFT_294199-T1|Name=M747DRAFT_294199-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1273bp|location=Sequence derived from alignment at KZ851907.1:639637..640909+ (Aspergillus niger ATCC 13496)
GACTATTTACGGTTGTACATCCCCCATTTATGATCCGCAAATGGCTATCT
CAGACCTACTGAATCGCCGTGTGCGAGCTGTCGCTCAGGACGACGAGGAG
CTTTACTCTGACCAGTCTGGCTCGGATCAGGCGAGCGACGATCTCCGCTC
TGACGAGTCAGGCTCAGAAAGTGGCAGTGATGGTTCCCTAGACGAAGACG
ACGACGACGATGTGGTTAGTTTCCCCTCGTTTGGATAGACATTGCAACAT
GCTGACTATCTCACAGTCTCAAGGCGACCCGGAAGATATGGATGATGACG
ACGATGACGACGATGACGACGACGAAGATGACGAAGACGACAATGATGAT
GCCCAGGACGACGTTCAAGCCTCACTAAGCAGTATCTCGTTCGGCGCATT
GGCGAAAGCGCAAGCATCTATAGGACCCAAATCAAAGCGGTCGTCCAAGG
CCTCCCGGACAGAAGACGAGCCTGCCGCTCCTTCCCCCTTAGACGACATT
CGGGCGCGGATTCAAGAGGCACGCGAACAGAAACGCCAAGCGCTGGCGAA
AAATAAGGATTCGGAAAAGCTCTCTCGTTCCTCCAAGCATGCGCCGGCCG
TACAATCCTCCAAACATGCCGTCTCCCGCAAACGGACCATCATTGAGCCG
CCAAGTGTACCCAAGTCGCGAGACCCCCGTTTTGACCCGACTGTCCTGAG
CCAGGGTGGTCGCGGAAACCCTCAAGGAACGAGCAACGCTTACGCATTCT
TGGACGAGTATCGCCGGGACGAACTGAAGCAGTTGAAGGAACAATACGCC
AAGACGAAGAACCAAGAACAGAAAGAAGCTCTGAAGCGTACGATTCGGTC
GACTCAAGACCGTCTTCGAGCGATGGAGAATAGGAAACGCGAGAAGGAGA
TCTTAGCGGAGCATAAGAAGAAGGAGAAACAGCTCATCCGCGAAGGAAAG
AAGAGCAACCCGTACTTCTTGAAGAAGTCGGACCTGAAGAAGCAGGTGCT
GCTCAAGAAGTACGAGAATATGAACTCCAAGGACCGCACCAAGGCACTCG
AGAGGAAGCGCAAGAAGACTGCCGCCAAGGAAAGAAAGGAGATGCCCATG
GAGCGGAGAGCCTTGGCTGGCGACGATGCGCCGAGTGGCGGTGGAGGTGG
CGGCTGGAAACGCCGCAGAGTTGCATAGATGTTGGGACTTGCTGTCTGAT
TTCGGCGCCTGGCTCATGTTATTGTATATAGTTCGCAACTGCATAGGCAT
TTTCCTTCTACGAAATTCTCCAG back to topCoding sequence (CDS) from alignment at KZ851907.1:639637..640909+ >M747DRAFT_294199-T1 ID=M747DRAFT_294199-T1|Name=M747DRAFT_294199-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2172bp|location=Sequence derived from alignment at KZ851907.1:639637..640909+ (Aspergillus niger ATCC 13496)
ATGGCTATCTCAGACCTACTGAATCGCCGTGTGCGAGCTGTCGCTCAGGA
CGACGAGGAGCTTTACTCTGACCAGTCTGGCTCGGATCAGGCGAGCGACG
ATCTCCGCTCTGACGAGTCAGGCTCAGAAAGTGGCAGTGATGGTTCCCTA
GACGAAGACGACGACGACGATGTGTCTCAAGGCGACCCGGAAGATATGGA
TGATGACGACGATGACGACGATGACGACGACGAAGATGACGAAGACGACA
ATGATGATGCCCAGGACGACGTTCAAGCCTCACTAAGCAGTATCTCGTTC
GGCGCATTGGCGAAAGCGCAAGCATCTATAGGACCCAAATCAAAGCGGTC
GTCCAAGGCCTCCCGGACAGAAGACGAGCCTGCCGCTCCTTCCCCCTTAG
ACGACATTCGGGCGCGGATTCAAGAGGCACGCGAACAGAAACGCCAAGCG
CTGGCGAAAAATAAGGATTCGGAAAAGCTCTCTCGTTCCTCCAAGCATGC
GCCGGCCGTACAATCCTCCAAACATGCCGTCTCCCGCAAACGGACCATCA
TTGAGCCGCCAAGTGTACCCAAGTCGCGAGACCCCCGTTTTGACCCGACT
GTCCTGAGCCAGGGTGGTCGCGGAAACCCTCAAGGAACGAGCAACGCTTA
CGCATTCTTGGACGAGTATCGCCGGGACGAACTGAAGCAGTTGAAGGAAC
AATACGCCAAGACGAAGAACCAAGAACAGAAAGAAGCTCTGAAGCGTACG
ATTCGGTCGACTCAAGACCGTCTTCGAGCGATGGAGAATAGGAAACGCGA
GAAGGAGATCTTAGCGGAGCATAAGAAGAAGGAGAAACAGCTCATCCGCG
AAGGAAAGAAGAGCAACCCGTACTTCTTGAAGAAGTCGGACCTGAAGAAG
CAGGTGCTGCTCAAGAAGTACGAGAATATGAACTCCAAGGACCGCACCAA
GGCACTCGAGAGGAAGCGCAAGAAGACTGCCGCCAAGGAAAGAAAGGAGA
TGCCCATGGAGCGGAGAGCCTTGGCTGGCGACGATGCGCCGAGTGGCGGT
GGAGGTGGCGGCTGGAAACGCCGCAGAGTTGCATAGATGGCTATCTCAGA
CCTACTGAATCGCCGTGTGCGAGCTGTCGCTCAGGACGACGAGGAGCTTT
ACTCTGACCAGTCTGGCTCGGATCAGGCGAGCGACGATCTCCGCTCTGAC
GAGTCAGGCTCAGAAAGTGGCAGTGATGGTTCCCTAGACGAAGACGACGA
CGACGATGTGTCTCAAGGCGACCCGGAAGATATGGATGATGACGACGATG
ACGACGATGACGACGACGAAGATGACGAAGACGACAATGATGATGCCCAG
GACGACGTTCAAGCCTCACTAAGCAGTATCTCGTTCGGCGCATTGGCGAA
AGCGCAAGCATCTATAGGACCCAAATCAAAGCGGTCGTCCAAGGCCTCCC
GGACAGAAGACGAGCCTGCCGCTCCTTCCCCCTTAGACGACATTCGGGCG
CGGATTCAAGAGGCACGCGAACAGAAACGCCAAGCGCTGGCGAAAAATAA
GGATTCGGAAAAGCTCTCTCGTTCCTCCAAGCATGCGCCGGCCGTACAAT
CCTCCAAACATGCCGTCTCCCGCAAACGGACCATCATTGAGCCGCCAAGT
GTACCCAAGTCGCGAGACCCCCGTTTTGACCCGACTGTCCTGAGCCAGGG
TGGTCGCGGAAACCCTCAAGGAACGAGCAACGCTTACGCATTCTTGGACG
AGTATCGCCGGGACGAACTGAAGCAGTTGAAGGAACAATACGCCAAGACG
AAGAACCAAGAACAGAAAGAAGCTCTGAAGCGTACGATTCGGTCGACTCA
AGACCGTCTTCGAGCGATGGAGAATAGGAAACGCGAGAAGGAGATCTTAG
CGGAGCATAAGAAGAAGGAGAAACAGCTCATCCGCGAAGGAAAGAAGAGC
AACCCGTACTTCTTGAAGAAGTCGGACCTGAAGAAGCAGGTGCTGCTCAA
GAAGTACGAGAATATGAACTCCAAGGACCGCACCAAGGCACTCGAGAGGA
AGCGCAAGAAGACTGCCGCCAAGGAAAGAAAGGAGATGCCCATGGAGCGG
AGAGCCTTGGCTGGCGACGATGCGCCGAGTGGCGGTGGAGGTGGCGGCTG
GAAACGCCGCAGAGTTGCATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000469 | cleavage involved in rRNA processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265M98 |
| DBxref | InterPro:IPR009292 |
| DBxref | PFAM:PF06102 |
| Product | rRNA bioproteinsis protein rrp36 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851907.1 | supercontig | KZ851907.1:639637..640909 + |
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