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M747DRAFT_294202-T1, M747DRAFT_294202-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_294202-T1
Unique NameM747DRAFT_294202-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851907.1:652308..653391-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_294202-T1 ID=M747DRAFT_294202-T1|Name=M747DRAFT_294202-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1084bp|location=Sequence derived from alignment at KZ851907.1:652308..653391- (Aspergillus niger ATCC 13496)
CCATCGACTTCCCTTCCTTTTCCCCATTCGCTCTCCTCCCCCACCGCGGT
CTTTCTCTCCCCTCTCATCTCAAGTGTGCCATTGTCGAGCCTCACCACCG
GGCCACTATTCAAGATGACCATCAACCCGACCTTCCTTGCCCAGCGCACG
CGCTCCTGTACGTTTTCCCTTCCTCCCAGGACTCGGTTGTCCCGACCAAG
TCCGACCTTTAGAAATTGCCGCGACGTCAATGGCCGGAATCCCGAGCTGA
CCTTTCTCGCCCTGTGTAGCTGCCAACTGGGGTGATGCGAAGCACCGTGT
CCTCAAGTCCTACAGAGAATGGCTTAGAGCGGTCAGTGATCCTTATACTC
GATGATTTACCTATGCATCATCACCCAATGCCCGTTCATCAATGGCTTGC
TGGGGCCTGGCGTTCCCGGCGTGGTCGTCGACCCTTTCGCGTCTACCAGA
CAGAACCTGCGACGGACCAAATCCCAACTTCGATAATTAGCATTCTACGA
GAAACGCTCAGACTAACATGGTCCCATCCAATTGAGATGATATAGTCCCC
CGAGATTCAGACTATGTACTCTCTGAACCTCCCCGTCTCCGCTATCCGTA
CGAAGATCCGCCAGGAATTCGAGAAGCACCGCTACGTCAACCAGCTGAAC
GTTGTTGATGTGCTGTTGTACCAGAGCCACGCTGAGTTCCAGGTGAGTTT
ATGAAAAGTGGGCAGTGTAGCGATACTCAATTGCTGCCATTGATGCCGCC
CAGCCCGACCAATTGAGCCTCATATGGTATAGATAATGTGTCCTGACCAA
CATCAATAGGAAACCCTCAACTACTGGAAGCAGCTGTCGCATGTGATGAA
GTACTTCCGTCCAGAGGAGGACCCCGGTGCTCGGCTACCTCCCAACTTCA
TCTCGGGCTTCTTGGAAGGCCGCAATTGAAATTGTGAAATTATTATCACC
ATCATCTCTTATCACCTCTTTTTATATTTCCCAGTATCCTTAGCATTGAA
AGTTCTCTGACGGCTGCGAACGCTGATAGAGTGTGTGAGTGTTATGTAAA
TATTGTCTGACTACATGATGTTTCGGTTGTTGAA
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Coding sequence (CDS) from alignment at KZ851907.1:652308..653391-

>M747DRAFT_294202-T1 ID=M747DRAFT_294202-T1|Name=M747DRAFT_294202-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1488bp|location=Sequence derived from alignment at KZ851907.1:652308..653391- (Aspergillus niger ATCC 13496)
GAAACCCTCAACTACTGGAAGCAGCTGTCGCATGTGATGAAGTACTTCCG
TCCAGAGGAGGACCCCGGTGCTCGGCTACCTCCCAACTTCATCTCGGGCT
TCTTGGAAGGCCGCAATTGATCCCCCGAGATTCAGACTATGTACTCTCTG
AACCTCCCCGTCTCCGCTATCCGTACGAAGATCCGCCAGGAATTCGAGAA
GCACCGCTACGTCAACCAGCTGAACGTTGTTGATGTGCTGTTGTACCAGA
GCCACGCTGAGTTCCAGCTGCCAACTGGGGTGATGCGAAGCACCGTGTCC
TCAAGTCCTACAGAGAATGGCTTAGAGCGATGACCATCAACCCGACCTTC
CTTGCCCAGCGCACGCGCTCCTGAAACCCTCAACTACTGGAAGCAGCTGT
CGCATGTGATGAAGTACTTCCGTCCAGAGGAGGACCCCGGTGCTCGGCTA
CCTCCCAACTTCATCTCGGGCTTCTTGGAAGGCCGCAATTGATCCCCCGA
GATTCAGACTATGTACTCTCTGAACCTCCCCGTCTCCGCTATCCGTACGA
AGATCCGCCAGGAATTCGAGAAGCACCGCTACGTCAACCAGCTGAACGTT
GTTGATGTGCTGTTGTACCAGAGCCACGCTGAGTTCCAGCTGCCAACTGG
GGTGATGCGAAGCACCGTGTCCTCAAGTCCTACAGAGAATGGCTTAGAGC
GATGACCATCAACCCGACCTTCCTTGCCCAGCGCACGCGCTCCTGAAACC
CTCAACTACTGGAAGCAGCTGTCGCATGTGATGAAGTACTTCCGTCCAGA
GGAGGACCCCGGTGCTCGGCTACCTCCCAACTTCATCTCGGGCTTCTTGG
AAGGCCGCAATTGATCCCCCGAGATTCAGACTATGTACTCTCTGAACCTC
CCCGTCTCCGCTATCCGTACGAAGATCCGCCAGGAATTCGAGAAGCACCG
CTACGTCAACCAGCTGAACGTTGTTGATGTGCTGTTGTACCAGAGCCACG
CTGAGTTCCAGCTGCCAACTGGGGTGATGCGAAGCACCGTGTCCTCAAGT
CCTACAGAGAATGGCTTAGAGCGATGACCATCAACCCGACCTTCCTTGCC
CAGCGCACGCGCTCCTGAAACCCTCAACTACTGGAAGCAGCTGTCGCATG
TGATGAAGTACTTCCGTCCAGAGGAGGACCCCGGTGCTCGGCTACCTCCC
AACTTCATCTCGGGCTTCTTGGAAGGCCGCAATTGATCCCCCGAGATTCA
GACTATGTACTCTCTGAACCTCCCCGTCTCCGCTATCCGTACGAAGATCC
GCCAGGAATTCGAGAAGCACCGCTACGTCAACCAGCTGAACGTTGTTGAT
GTGCTGTTGTACCAGAGCCACGCTGAGTTCCAGCTGCCAACTGGGGTGAT
GCGAAGCACCGTGTCCTCAAGTCCTACAGAGAATGGCTTAGAGCGATGAC
CATCAACCCGACCTTCCTTGCCCAGCGCACGCGCTCCT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_294202M747DRAFT_294202Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294202-T1M747DRAFT_294202-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294202-T1.cdsM747DRAFT_294202-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294202-T1.utr3p1M747DRAFT_294202-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294202-T1.exon4M747DRAFT_294202-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_294202-T1.exon3M747DRAFT_294202-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_294202-T1.exon2M747DRAFT_294202-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_294202-T1.exon1M747DRAFT_294202-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294202-T1.utr5p1M747DRAFT_294202-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR016488
DBxrefPFAM:PF13233
DBxrefPFAM:PF05347
Product subunit 6
Product alpha subcomplex
ProductNADH dehydrogenase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851907.1supercontigKZ851907.1:652308..653391 -
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