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M747DRAFT_294366-T1, M747DRAFT_294366-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_294366-T1
Unique NameM747DRAFT_294366-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851908.1:351242..353187-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_294366-T1 ID=M747DRAFT_294366-T1|Name=M747DRAFT_294366-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1946bp|location=Sequence derived from alignment at KZ851908.1:351242..353187- (Aspergillus niger ATCC 13496)
AACCAACTCAGGAACGGATCCCCTTTTCTCGTCCCTGTCCTTCCAACTCA
CTTTCGCTTTCATTTCTGCCATTCTTCTCACATTCGCTCTCCCTCCTGGC
TCCCTCTCCTCGCATTACCGCGTACCTACTGCGACGCGGTCGGATTCCCC
CACCCATCATGTCTCTCGTGCCCGTCGACACCACTCTGCAAGTCCCACCT
CCTGATCCGGTTCAGAAGCCCCCTGAGGTGGCCATCACGCCCTGTGACCC
ATGGCCTGCACCATACTATTTTGAAGGCGGCTTGCGCCGGGTGAAGCCCT
ACCACTACACCTACAACACTTTTTGCAAGGAGCGCTGGCGGGGTCGTGAA
TTGGTGGACATTTTCCTGTCGGAGTTTCGCGACCGTCCCGCAGAGTACTA
CGTACGTTCTCATCTCTTGGCTATTCTTTAAAGAATCATATACTGACATA
GTTGTTCTGGACCGCAGAGGAAAGCCCTACAAGATGGCCTTGTTGCCGTC
AACGGCACGCCTGCTGGCCCCAATACCGTCGTCAAGAACGGCCAGATCAT
CTCGCATACTCTGCACCGTCACGAACCCCCCGTCACCGGGAAAGAGATTG
GTATCATCCACGAGGATGACGATCTGATTGTCATTGACAAGCCCGCCGGT
GTGCCCGTCCACTCCGCTGGTCGCTACCACTACAACTCCGTGCTCGAGAT
CATGCGCTCTCAACGCCATCCGGAATGGGTCCCACGACCTTGCAATCGTT
TGGACCGACTCACCTCCGGAGTCATGTTCCTCGGAAAGACCGCGAAAGCT
GCAGAGAACATGACCGGAAAGCTCAAGGCCCGCACCCTCCAGAAGGAGTA
TGTGGCGCGCGTCAAGGGAAAATTCCCTGACGGTGTCATCGTCTGCGATC
AGCCCATCATGTCCGTGAGCCCAAAGGTAGGCTTGAACCGCGTTCGTGCC
ACTGGCAAGGAGGCAAAGACCAAGTTCCGTCGCCTGGCGTATATCCCGCC
TCAAGCTCCGGAGCCTCAGAGCGCTTCCGACGCAGAGGGACGGGTGGCGA
CCCCACCCCCGATCTACACCAACGAAGACGAAGGATACAGTATCGTCCAC
TGTCTGCCATTGACTGGCCGCACGCATCAGATCCGCGTGCATCTCCAGTT
CCTCGGACACCCGATCTCGAACGATCCCATCTACTCCAATCGCAAAGTCT
TCGGACCCGATCTCGGAAAGAACGAGACCAGCGACGAGCGCGACAACGAG
CTCATTGATAAGCTATGTAATATTGGCAAGACTGAAGTCCCCGACACCGT
AAGCTATCGGACACACCTTACCACAGTGCCTCTGGTACCGCCGGGCACGG
ATAACTCTGTTGTGGAGGAGATCATGTCGCGCGAGCACGAGGCCGCCGTG
GAGAGATACCACAAGCGCAAAGGCGAGATGTTGTCTGGCGAGAGATGCAA
GATCTGCGACACAGAGCTCTACTCGGACCCTAGACCCGAGGATCTAGGCA
TTTTCCTCCACGCCGCGGCGTACTCTGACAAAGAGGATGGCTGGAAATAC
ACTAGCAAGATGCCTACCTGGGCTCTGCCGCCTGATGGCGTGGAGGGACC
GCGCGAGATGCCCGACTGGGTGTTTGTTCCCGAGGAAGAGGAGATTGTTA
TCGGACATGCTGTCTTGCCTGGCGCGGAGGACGGCTCGGAGTCGAATATC
CCTGCTCTTGTGCAGGGTGTCGGCCTAGTCGACATTTCGTCTGGTAGGAA
GGCAGATGCCGCTGCGCAGGCGACTGCTTGATGGGATCATGTTCTAACTA
GTTTGGTTACATGGTGCATAATTTGGCGTTGCTTGCAATTGCAATTAGAG
ATTTTAGACATGTTGAGATGACGGACGACGAACTACATTATGTCACATAG
TTGGATTCGTTTACTTGATACCACCATAGACAAGTTTCATCTGCCA
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Coding sequence (CDS) from alignment at KZ851908.1:351242..353187-

>M747DRAFT_294366-T1 ID=M747DRAFT_294366-T1|Name=M747DRAFT_294366-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3114bp|location=Sequence derived from alignment at KZ851908.1:351242..353187- (Aspergillus niger ATCC 13496)
AGGAAAGCCCTACAAGATGGCCTTGTTGCCGTCAACGGCACGCCTGCTGG
CCCCAATACCGTCGTCAAGAACGGCCAGATCATCTCGCATACTCTGCACC
GTCACGAACCCCCCGTCACCGGGAAAGAGATTGGTATCATCCACGAGGAT
GACGATCTGATTGTCATTGACAAGCCCGCCGGTGTGCCCGTCCACTCCGC
TGGTCGCTACCACTACAACTCCGTGCTCGAGATCATGCGCTCTCAACGCC
ATCCGGAATGGGTCCCACGACCTTGCAATCGTTTGGACCGACTCACCTCC
GGAGTCATGTTCCTCGGAAAGACCGCGAAAGCTGCAGAGAACATGACCGG
AAAGCTCAAGGCCCGCACCCTCCAGAAGGAGTATGTGGCGCGCGTCAAGG
GAAAATTCCCTGACGGTGTCATCGTCTGCGATCAGCCCATCATGTCCGTG
AGCCCAAAGGTAGGCTTGAACCGCGTTCGTGCCACTGGCAAGGAGGCAAA
GACCAAGTTCCGTCGCCTGGCGTATATCCCGCCTCAAGCTCCGGAGCCTC
AGAGCGCTTCCGACGCAGAGGGACGGGTGGCGACCCCACCCCCGATCTAC
ACCAACGAAGACGAAGGATACAGTATCGTCCACTGTCTGCCATTGACTGG
CCGCACGCATCAGATCCGCGTGCATCTCCAGTTCCTCGGACACCCGATCT
CGAACGATCCCATCTACTCCAATCGCAAAGTCTTCGGACCCGATCTCGGA
AAGAACGAGACCAGCGACGAGCGCGACAACGAGCTCATTGATAAGCTATG
TAATATTGGCAAGACTGAAGTCCCCGACACCGTAAGCTATCGGACACACC
TTACCACAGTGCCTCTGGTACCGCCGGGCACGGATAACTCTGTTGTGGAG
GAGATCATGTCGCGCGAGCACGAGGCCGCCGTGGAGAGATACCACAAGCG
CAAAGGCGAGATGTTGTCTGGCGAGAGATGCAAGATCTGCGACACAGAGC
TCTACTCGGACCCTAGACCCGAGGATCTAGGCATTTTCCTCCACGCCGCG
GCGTACTCTGACAAAGAGGATGGCTGGAAATACACTAGCAAGATGCCTAC
CTGGGCTCTGCCGCCTGATGGCGTGGAGGGACCGCGCGAGATGCCCGACT
GGGTGTTTGTTCCCGAGGAAGAGGAGATTGTTATCGGACATGCTGTCTTG
CCTGGCGCGGAGGACGGCTCGGAGTCGAATATCCCTGCTCTTGTGCAGGG
TGTCGGCCTAGTCGACATTTCGTCTGGTAGGAAGGCAGATGCCGCTGCGC
AGGCGACTGCTTGAATGTCTCTCGTGCCCGTCGACACCACTCTGCAAGTC
CCACCTCCTGATCCGGTTCAGAAGCCCCCTGAGGTGGCCATCACGCCCTG
TGACCCATGGCCTGCACCATACTATTTTGAAGGCGGCTTGCGCCGGGTGA
AGCCCTACCACTACACCTACAACACTTTTTGCAAGGAGCGCTGGCGGGGT
CGTGAATTGGTGGACATTTTCCTGTCGGAGTTTCGCGACCGTCCCGCAGA
GTACTACAGGAAAGCCCTACAAGATGGCCTTGTTGCCGTCAACGGCACGC
CTGCTGGCCCCAATACCGTCGTCAAGAACGGCCAGATCATCTCGCATACT
CTGCACCGTCACGAACCCCCCGTCACCGGGAAAGAGATTGGTATCATCCA
CGAGGATGACGATCTGATTGTCATTGACAAGCCCGCCGGTGTGCCCGTCC
ACTCCGCTGGTCGCTACCACTACAACTCCGTGCTCGAGATCATGCGCTCT
CAACGCCATCCGGAATGGGTCCCACGACCTTGCAATCGTTTGGACCGACT
CACCTCCGGAGTCATGTTCCTCGGAAAGACCGCGAAAGCTGCAGAGAACA
TGACCGGAAAGCTCAAGGCCCGCACCCTCCAGAAGGAGTATGTGGCGCGC
GTCAAGGGAAAATTCCCTGACGGTGTCATCGTCTGCGATCAGCCCATCAT
GTCCGTGAGCCCAAAGGTAGGCTTGAACCGCGTTCGTGCCACTGGCAAGG
AGGCAAAGACCAAGTTCCGTCGCCTGGCGTATATCCCGCCTCAAGCTCCG
GAGCCTCAGAGCGCTTCCGACGCAGAGGGACGGGTGGCGACCCCACCCCC
GATCTACACCAACGAAGACGAAGGATACAGTATCGTCCACTGTCTGCCAT
TGACTGGCCGCACGCATCAGATCCGCGTGCATCTCCAGTTCCTCGGACAC
CCGATCTCGAACGATCCCATCTACTCCAATCGCAAAGTCTTCGGACCCGA
TCTCGGAAAGAACGAGACCAGCGACGAGCGCGACAACGAGCTCATTGATA
AGCTATGTAATATTGGCAAGACTGAAGTCCCCGACACCGTAAGCTATCGG
ACACACCTTACCACAGTGCCTCTGGTACCGCCGGGCACGGATAACTCTGT
TGTGGAGGAGATCATGTCGCGCGAGCACGAGGCCGCCGTGGAGAGATACC
ACAAGCGCAAAGGCGAGATGTTGTCTGGCGAGAGATGCAAGATCTGCGAC
ACAGAGCTCTACTCGGACCCTAGACCCGAGGATCTAGGCATTTTCCTCCA
CGCCGCGGCGTACTCTGACAAAGAGGATGGCTGGAAATACACTAGCAAGA
TGCCTACCTGGGCTCTGCCGCCTGATGGCGTGGAGGGACCGCGCGAGATG
CCCGACTGGGTGTTTGTTCCCGAGGAAGAGGAGATTGTTATCGGACATGC
TGTCTTGCCTGGCGCGGAGGACGGCTCGGAGTCGAATATCCCTGCTCTTG
TGCAGGGTGTCGGCCTAGTCGACATTTCGTCTGGTAGGAAGGCAGATGCC
GCTGCGCAGGCGACTGCTTGAATGTCTCTCGTGCCCGTCGACACCACTCT
GCAAGTCCCACCTCCTGATCCGGTTCAGAAGCCCCCTGAGGTGGCCATCA
CGCCCTGTGACCCATGGCCTGCACCATACTATTTTGAAGGCGGCTTGCGC
CGGGTGAAGCCCTACCACTACACCTACAACACTTTTTGCAAGGAGCGCTG
GCGGGGTCGTGAATTGGTGGACATTTTCCTGTCGGAGTTTCGCGACCGTC
CCGCAGAGTACTAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0009982pseudouridine synthase activity
Vocabulary: Biological Process
TermDefinition
GO:0001522pseudouridine synthesis
GO:0009451RNA modification
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_294366M747DRAFT_294366Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294366-T1M747DRAFT_294366-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294366-T1.cdsM747DRAFT_294366-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294366-T1.utr3p1M747DRAFT_294366-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294366-T1.exon2M747DRAFT_294366-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_294366-T1.exon1M747DRAFT_294366-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294366-T1.utr5p1M747DRAFT_294366-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR020103
DBxrefInterPro:IPR002942
DBxrefInterPro:IPR006224
DBxrefInterPro:IPR006225
DBxrefInterPro:IPR006145
DBxrefPFAM:PF00849
Productpseudouridine synthase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851908.1supercontigKZ851908.1:351242..353187 -
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