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M747DRAFT_294572-T1, M747DRAFT_294572-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_294572-T1
Unique NameM747DRAFT_294572-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851909.1:227548..228787+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_294572-T1 ID=M747DRAFT_294572-T1|Name=M747DRAFT_294572-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1240bp|location=Sequence derived from alignment at KZ851909.1:227548..228787+ (Aspergillus niger ATCC 13496)
CTCTTCTGGTCCTCAGGGACATCTATTTAAATCTCCCCTTAACCGGACAT
CTCCTATCGCATCGAGTGAAAGACCACCGCGGTTAGCGAGATCCCAACAT
GCCCAAGAACAAGGGAAAGGTGAGTTTGTGCTGCATCCCACCCGGGTACC
CCGCCTTACAGATTCTCGCTTTGTTTTACGCTTGACTCTGGAGCGCACCT
CATGCCACCATATCCCACCTCAACGACACACTTCAGCCCAGAAGATGTGG
GATAAGGCGGCATAGAGGCTGTTATACCAATAGAGCATTGCAGAACGAAG
CGAACCTGCGCCACAAGTCTGTACGCATGTCTAGGACAGTTTTGCTGACG
TATCTGCATTCAAACAGGGCGGTAAGAACCGTCGTCGTGGAAAGAACGAG
AACGACAACGAGAAGCGTGAGCTTGTCTTCAAGGAAGAAGGCCAGGAGTA
TGCGCAGGTCGTGAAGATGCTTGGTAACGGCCGTCTGGAGGCACTTTGCT
TCGATGGCGAGAAGCGTCTGGCTCACATCCGTGGCAAGCTCCGCAAGAAG
GTCTGGATCAACCAGGGCGACATCATCCTTCTCTCGCTGCGTGACTACCA
AGACGAAAAGGGCGACGTCATCATGAAGTACACCGCCGATGAGGCCAGAA
GTCTCAAGGCCTACGGCGAGTTGCCCGAGCACGCCAAGATCAACGAGACC
GACACCTACGGCCACGAGGGCTTCGAGGACAACGTCGAGTTCGACGAGGA
CCGCGAGAGCGAAGACGAGAAGGAGATCGATGTCGACGAGCTCTAAACGC
CTCTTTCAGGGGCACGATCTCATATCCCTACCGGAGCGACTGGGTTCGGT
TCTGTTTTTCTCGACTCATTAAAACTATTGTTTTCTTCAAAAAGCCTTCA
TGGGAAGAATCTCCCCGAGTATTCTTCCGAACAAGCTGTTACTTGCTTTG
AAAGGAAAGAAATCGGACGGCTTGTGCATGCTGTGTGTGTGTGCTAGTCG
AGATTTTCCCGCGAAGGTGTCTCGAGTAAAGGAATCAGGGCGGCAGCACC
TCCCCGCTCCGCATAGGCGCGTTCTGCCTTTGCTGCGCCCGGTGCGGCTC
CGTGTAGTTCGGGGTATGGATCAGTAACAGGGGTTACGCCGGGGGATGTT
CTTCATGGTGGGGGTTATCGGTTTTCTGGACATATTCGTGTTCCATCATG
AGGGTGTTCTCGGGTTAGCTACAGAAGGATGGCTTACTGC
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Coding sequence (CDS) from alignment at KZ851909.1:227548..228787+

>M747DRAFT_294572-T1 ID=M747DRAFT_294572-T1|Name=M747DRAFT_294572-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=900bp|location=Sequence derived from alignment at KZ851909.1:227548..228787+ (Aspergillus niger ATCC 13496)
ATGCCCAAGAACAAGGGAAAGGGCGGTAAGAACCGTCGTCGTGGAAAGAA
CGAGAACGACAACGAGAAGCGTGAGCTTGTCTTCAAGGAAGAAGGCCAGG
AGTATGCGCAGGTCGTGAAGATGCTTGGTAACGGCCGTCTGGAGGCACTT
TGCTTCGATGGCGAGAAGCGTCTGGCTCACATCCGTGGCAAGCTCCGCAA
GAAGGTCTGGATCAACCAGGGCGACATCATCCTTCTCTCGCTGCGTGACT
ACCAAGACGAAAAGGGCGACGTCATCATGAAGTACACCGCCGATGAGGCC
AGAAGTCTCAAGGCCTACGGCGAGTTGCCCGAGCACGCCAAGATCAACGA
GACCGACACCTACGGCCACGAGGGCTTCGAGGACAACGTCGAGTTCGACG
AGGACCGCGAGAGCGAAGACGAGAAGGAGATCGATGTCGACGAGCTCTAA
ATGCCCAAGAACAAGGGAAAGGGCGGTAAGAACCGTCGTCGTGGAAAGAA
CGAGAACGACAACGAGAAGCGTGAGCTTGTCTTCAAGGAAGAAGGCCAGG
AGTATGCGCAGGTCGTGAAGATGCTTGGTAACGGCCGTCTGGAGGCACTT
TGCTTCGATGGCGAGAAGCGTCTGGCTCACATCCGTGGCAAGCTCCGCAA
GAAGGTCTGGATCAACCAGGGCGACATCATCCTTCTCTCGCTGCGTGACT
ACCAAGACGAAAAGGGCGACGTCATCATGAAGTACACCGCCGATGAGGCC
AGAAGTCTCAAGGCCTACGGCGAGTTGCCCGAGCACGCCAAGATCAACGA
GACCGACACCTACGGCCACGAGGGCTTCGAGGACAACGTCGAGTTCGACG
AGGACCGCGAGAGCGAAGACGAGAAGGAGATCGATGTCGACGAGCTCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003743translation initiation factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EIF1AYM747DRAFT_294572Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294572-T1.utr5p1M747DRAFT_294572-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294572-T1.exon1M747DRAFT_294572-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_294572-T1.exon2M747DRAFT_294572-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294572-T1.cdsM747DRAFT_294572-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294572-T1.utr3p1M747DRAFT_294572-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294572-T1M747DRAFT_294572-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092652Y6
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR018104
DBxrefInterPro:IPR006196
DBxrefInterPro:IPR001253
DBxrefPFAM:PF01176
Product Y-chromosomal
ProductEukaryotic translation initiation factor 1A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851909.1supercontigKZ851909.1:227548..228787 +
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