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M747DRAFT_294600-T1, M747DRAFT_294600-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_294600-T1
Unique NameM747DRAFT_294600-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851909.1:322415..323634+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_294600-T1 ID=M747DRAFT_294600-T1|Name=M747DRAFT_294600-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1220bp|location=Sequence derived from alignment at KZ851909.1:322415..323634+ (Aspergillus niger ATCC 13496)
CCTAGGTGACGCCCGCTCTGGTAGTTTAGGCTTTGAAACTCATTGGGGGG
TTCTGACACTTTGAACGCGGATTCTCTGTTTGCTATCCGTGCCTGACTTA
CATTCTTGACAATTACCATCTCACTAAGCTCGCCAGAAACCTCCTACTCA
GCACTCCGGGGCGCCGCCTATACGTCACAACCCCCATCATGGTGATTATC
AACCTTGTCCAGGGGATCGGTTTACAATCCAAGCTAACAGAACCAGTCTC
AATCATTGCGTCCGTACCTTTTGGCTGTTAGATCTTCATTGACGGCAGCA
CTCGCGATATCGAACTTCGCTTCTCAAACCTCCGAAAGACAGTACGTTGG
GCCGGTTCCCATCCCCTCACCCTTTTGGGTCGGACCAGGCTAATTATGTA
TCTGGATAGCAATGTCCCCGAAATTGAAGCCGCAACTTCTCCGGAACTAC
TTCTCAACCCCCTTACAATCTCCCGGAATGAGAACGAGAGGGTCCTTATC
GAGCCCAGCGTGAACAGTGTCCGTGTCAGCATCCGAATCAAGCAGGCAGA
TGAGATCGAACATATCTTGGTCCACAAGTTCACTAGGTTCCTGACGCAGC
GCGCGGAATCCTTCTTCATTCTACGGAGAAAGCCAGTGAAGGGATATGAC
ATTTCATTCCTCATTACGAACTTCCATACTGAACAGATGCTGAAACACAA
ATTGGTGGACTTCATCATTCAATTGTATGTTTCATCTGCCTTGTCCATAT
GTCATTCGATCAATGAGAGGCTAACGATTTCTTCGTCTAATAGTATGGAG
GAAGTGGATAAGGAAATCTCGGAAATGAAGCTCTTCGTATGTGTCCATGT
CCATCTGATTGATGGAGGCTTCTAACCCACATTTGCTGTAGTTGAATGCT
CGTGCTCGTTTCGTTGCTGAGTCGTTCTTGACACCGGTAAGTCGCCCTGG
CTACTTCAGCTGAACCTGGCTGATAAAATTACAGTTTGATTAGATCGCCC
TAGCTTCATGGTTGGCACATGACCTTGATTTCCCCTTCCTCTCAGGAACA
ATTCTTGTACAGAAGTTTGATGCTTGTTCCTTTCTGCAGTCGTCCATATT
ATATCTCGAAATCAAATTTGTAGCGACCAGTACATCCATTATAAGGATAG
CCAGGCTACCTAGAACTGGACACTCTGTATCGTGTACAGCTGAGTCTGAC
CATGGCCGCCGTAAGTCTCA
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Coding sequence (CDS) from alignment at KZ851909.1:322415..323634+

>M747DRAFT_294600-T1 ID=M747DRAFT_294600-T1|Name=M747DRAFT_294600-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3060bp|location=Sequence derived from alignment at KZ851909.1:322415..323634+ (Aspergillus niger ATCC 13496)
ATGTCTCAATCATTGCGTCCGTACCTTTTGGCTGTTAGATCTTCATTGAC
GGCAGCACTCGCGATATCGAACTTCGCTTCTCAAACCTCCGAAAGACACA
ATGTCCCCGAAATTGAAGCCGCAACTTCTCCGGAACTACTTCTCAACCCC
CTTACAATCTCCCGGAATGAGAACGAGAGGGTCCTTATCGAGCCCAGCGT
GAACAGTGTCCGTGTCAGCATCCGAATCAAGCAGGCAGATGAGATCGAAC
ATATCTTGGTCCACAAGTTCACTAGGTTCCTGACGCAGCGCGCGGAATCC
TTCTTCATTCTACGGAGAAAGCCAGTGAAGGGATATGACATTTCATTCCT
CATTACGAACTTCCATACTGAACAGATGCTGAAACACAAATTGGTGGACT
TCATCATTCAATTTATGGAGGAAGTGGATAAGGAAATCTCGGAAATGAAG
CTCTTCTTGAATGCTCGTGCTCGTTTCGTTGCTGAGTCGTTCTTGACACC
GTTTGATTAGATGTCTCAATCATTGCGTCCGTACCTTTTGGCTGTTAGAT
CTTCATTGACGGCAGCACTCGCGATATCGAACTTCGCTTCTCAAACCTCC
GAAAGACACAATGTCCCCGAAATTGAAGCCGCAACTTCTCCGGAACTACT
TCTCAACCCCCTTACAATCTCCCGGAATGAGAACGAGAGGGTCCTTATCG
AGCCCAGCGTGAACAGTGTCCGTGTCAGCATCCGAATCAAGCAGGCAGAT
GAGATCGAACATATCTTGGTCCACAAGTTCACTAGGTTCCTGACGCAGCG
CGCGGAATCCTTCTTCATTCTACGGAGAAAGCCAGTGAAGGGATATGACA
TTTCATTCCTCATTACGAACTTCCATACTGAACAGATGCTGAAACACAAA
TTGGTGGACTTCATCATTCAATTTATGGAGGAAGTGGATAAGGAAATCTC
GGAAATGAAGCTCTTCTTGAATGCTCGTGCTCGTTTCGTTGCTGAGTCGT
TCTTGACACCGTTTGATTAGATGTCTCAATCATTGCGTCCGTACCTTTTG
GCTGTTAGATCTTCATTGACGGCAGCACTCGCGATATCGAACTTCGCTTC
TCAAACCTCCGAAAGACACAATGTCCCCGAAATTGAAGCCGCAACTTCTC
CGGAACTACTTCTCAACCCCCTTACAATCTCCCGGAATGAGAACGAGAGG
GTCCTTATCGAGCCCAGCGTGAACAGTGTCCGTGTCAGCATCCGAATCAA
GCAGGCAGATGAGATCGAACATATCTTGGTCCACAAGTTCACTAGGTTCC
TGACGCAGCGCGCGGAATCCTTCTTCATTCTACGGAGAAAGCCAGTGAAG
GGATATGACATTTCATTCCTCATTACGAACTTCCATACTGAACAGATGCT
GAAACACAAATTGGTGGACTTCATCATTCAATTTATGGAGGAAGTGGATA
AGGAAATCTCGGAAATGAAGCTCTTCTTGAATGCTCGTGCTCGTTTCGTT
GCTGAGTCGTTCTTGACACCGTTTGATTAGATGTCTCAATCATTGCGTCC
GTACCTTTTGGCTGTTAGATCTTCATTGACGGCAGCACTCGCGATATCGA
ACTTCGCTTCTCAAACCTCCGAAAGACACAATGTCCCCGAAATTGAAGCC
GCAACTTCTCCGGAACTACTTCTCAACCCCCTTACAATCTCCCGGAATGA
GAACGAGAGGGTCCTTATCGAGCCCAGCGTGAACAGTGTCCGTGTCAGCA
TCCGAATCAAGCAGGCAGATGAGATCGAACATATCTTGGTCCACAAGTTC
ACTAGGTTCCTGACGCAGCGCGCGGAATCCTTCTTCATTCTACGGAGAAA
GCCAGTGAAGGGATATGACATTTCATTCCTCATTACGAACTTCCATACTG
AACAGATGCTGAAACACAAATTGGTGGACTTCATCATTCAATTTATGGAG
GAAGTGGATAAGGAAATCTCGGAAATGAAGCTCTTCTTGAATGCTCGTGC
TCGTTTCGTTGCTGAGTCGTTCTTGACACCGTTTGATTAGATGTCTCAAT
CATTGCGTCCGTACCTTTTGGCTGTTAGATCTTCATTGACGGCAGCACTC
GCGATATCGAACTTCGCTTCTCAAACCTCCGAAAGACACAATGTCCCCGA
AATTGAAGCCGCAACTTCTCCGGAACTACTTCTCAACCCCCTTACAATCT
CCCGGAATGAGAACGAGAGGGTCCTTATCGAGCCCAGCGTGAACAGTGTC
CGTGTCAGCATCCGAATCAAGCAGGCAGATGAGATCGAACATATCTTGGT
CCACAAGTTCACTAGGTTCCTGACGCAGCGCGCGGAATCCTTCTTCATTC
TACGGAGAAAGCCAGTGAAGGGATATGACATTTCATTCCTCATTACGAAC
TTCCATACTGAACAGATGCTGAAACACAAATTGGTGGACTTCATCATTCA
ATTTATGGAGGAAGTGGATAAGGAAATCTCGGAAATGAAGCTCTTCTTGA
ATGCTCGTGCTCGTTTCGTTGCTGAGTCGTTCTTGACACCGTTTGATTAG
ATGTCTCAATCATTGCGTCCGTACCTTTTGGCTGTTAGATCTTCATTGAC
GGCAGCACTCGCGATATCGAACTTCGCTTCTCAAACCTCCGAAAGACACA
ATGTCCCCGAAATTGAAGCCGCAACTTCTCCGGAACTACTTCTCAACCCC
CTTACAATCTCCCGGAATGAGAACGAGAGGGTCCTTATCGAGCCCAGCGT
GAACAGTGTCCGTGTCAGCATCCGAATCAAGCAGGCAGATGAGATCGAAC
ATATCTTGGTCCACAAGTTCACTAGGTTCCTGACGCAGCGCGCGGAATCC
TTCTTCATTCTACGGAGAAAGCCAGTGAAGGGATATGACATTTCATTCCT
CATTACGAACTTCCATACTGAACAGATGCTGAAACACAAATTGGTGGACT
TCATCATTCAATTTATGGAGGAAGTGGATAAGGAAATCTCGGAAATGAAG
CTCTTCTTGAATGCTCGTGCTCGTTTCGTTGCTGAGTCGTTCTTGACACC
GTTTGATTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005885Arp2/3 protein complex
GO:0015629actin cytoskeleton
Vocabulary: Biological Process
TermDefinition
GO:0030833regulation of actin filament polymerization
GO:0030041actin filament polymerization
GO:0034314Arp2/3 complex-mediated actin nucleation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ARPC4M747DRAFT_294600Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294600-T1M747DRAFT_294600-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294600-T1.utr5p1M747DRAFT_294600-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294600-T1.exon1M747DRAFT_294600-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_294600-T1.exon2M747DRAFT_294600-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_294600-T1.exon3M747DRAFT_294600-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_294600-T1.exon4M747DRAFT_294600-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_294600-T1.exon5M747DRAFT_294600-T1.exon5Aspergillus niger ATCC 13496exon
M747DRAFT_294600-T1.exon6M747DRAFT_294600-T1.exon6Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294600-T1.cdsM747DRAFT_294600-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294600-T1.utr3p1M747DRAFT_294600-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09265CCT
DBxrefInterPro:IPR034666
DBxrefInterPro:IPR008384
DBxrefPFAM:PF05856
ProductActin- protein 2/3 complex subunit 4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851909.1supercontigKZ851909.1:322415..323634 +
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