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M747DRAFT_294888-T1, M747DRAFT_294888-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_294888-T1
Unique NameM747DRAFT_294888-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851910.1:589133..590535-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_294888-T1 ID=M747DRAFT_294888-T1|Name=M747DRAFT_294888-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1403bp|location=Sequence derived from alignment at KZ851910.1:589133..590535- (Aspergillus niger ATCC 13496)
GACGTACGTTCATCAGCGACACGACACGACAACCCATCGTCCCTTCGCTT
TTCGAGTCCCGTTCGGAAAGCGACCTTGAGAGGAACACCGCAAAAATGGC
TGACGAGCACTACGTGAGTTTTCCGATAACTAAAGACATGTTGAAGAGGA
CTAGGAAGAGTCTGAACTAACGTTCTTTTGCCTACAGAACGCCGAGGAGG
CTGCCGGTACGTTTGAAATTTTTTTGCCTGAACCACCCTTTCCTGCCCTG
GACCCCGGAAACAGAGACGAATTCGCGTTGTGGGAAACGGTATTTTGGCT
GGATATACGATATGATATGGACATAATTCGATGATGCGACACTTGGAAAT
TTTTGAGGAAGGGATGGGGGGGCAACGGACCGAATTCTCTGTCGACGTTT
CTATTCTTGCTTTTGCCACACCAACTACGAGAACCACGCAGCAGTGATTG
AAGGGAACACAAGGCGCTGACGTATCCGGGAAACAGAGATCAAGAAGAGA
AGACAGTTCCGCAAGTTCACCTACCGCGGTATTGACCTCGACCAGTACGT
TTCACCATGAATATCTATCATACCCACACTGCACTCCGAACCGACGGCCT
CGACTCCGAACGAGCGATATCAGCAATATGGACATTTCTGGATATTTGCG
GAATATCCTCGTGGGAGTTGACGGCCGAAGGAAGGAAATATGACAATCTA
TCGAAAAGACCGACGGGAAATATGTGGAATGGTATCTGACCTGTTTATCT
GCACAGGCTCCTTGACCTCTCCTCCGAACAGCTCCGTGATGTCGTTCACG
CCCGCGCTCGTCGTCGCTTCAACCGCGGTCTGAAGCGCAAGCCCATGGGT
CTCATCAAGAAGCTCCGCAAGGCCAAGCAGGAGGCTCGCCCCAACGAGAA
GCCCGACCTCGTCAAGACCCACCTCCGTGACATGATCGTTGTCCCCGAGA
TGATCGGCAGCGTCATCGGTATCTACTCCGGTAAGGAGTTCAACCAGATC
GAAGTCAAGCCCGAGATGGTTGGCCACTACCTGGGTGAATTCTCTATCTC
CTAGTACGTACCCCCAATAGCCGTATCCCCCGCGAGCGAATCCAAATGAA
TATGGTATGTCTAACAACCACACAGCAAGCCCGTCAAGCACGGTCGTCCC
GGTATCGGTGCCACCCACTCTTCCCGTTTCATTCCCCTCAAGTAAAGAAG
AAAAGCTTTAGTGGATGGAGTGTCGTCGTGTGGAGGAGGAACTCGGGCGT
ACGGAATGTTGCTGGGAGGATCTCTAGGGATAAAGGAAAAAAAGAATCAA
AACTGGATGGATACCCATATGGCATTTCTTTGGGTTCTCATCTTCTTACC
TTGTATGTCCAAGTGCGGGTCAGCTGTTTGCATCTCAATATAAAGGTCTT
GTC
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Coding sequence (CDS) from alignment at KZ851910.1:589133..590535-

>M747DRAFT_294888-T1 ID=M747DRAFT_294888-T1|Name=M747DRAFT_294888-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2310bp|location=Sequence derived from alignment at KZ851910.1:589133..590535- (Aspergillus niger ATCC 13496)
CAAGCCCGTCAAGCACGGTCGTCCCGGTATCGGTGCCACCCACTCTTCCC
GTTTCATTCCCCTCAAGTAAGCTCCTTGACCTCTCCTCCGAACAGCTCCG
TGATGTCGTTCACGCCCGCGCTCGTCGTCGCTTCAACCGCGGTCTGAAGC
GCAAGCCCATGGGTCTCATCAAGAAGCTCCGCAAGGCCAAGCAGGAGGCT
CGCCCCAACGAGAAGCCCGACCTCGTCAAGACCCACCTCCGTGACATGAT
CGTTGTCCCCGAGATGATCGGCAGCGTCATCGGTATCTACTCCGGTAAGG
AGTTCAACCAGATCGAAGTCAAGCCCGAGATGGTTGGCCACTACCTGGGT
GAATTCTCTATCTCCTAAGATCAAGAAGAGAAGACAGTTCCGCAAGTTCA
CCTACCGCGGTATTGACCTCGACCAAACGCCGAGGAGGCTGCCGATGGCT
GACGAGCACTACCAAGCCCGTCAAGCACGGTCGTCCCGGTATCGGTGCCA
CCCACTCTTCCCGTTTCATTCCCCTCAAGTAAGCTCCTTGACCTCTCCTC
CGAACAGCTCCGTGATGTCGTTCACGCCCGCGCTCGTCGTCGCTTCAACC
GCGGTCTGAAGCGCAAGCCCATGGGTCTCATCAAGAAGCTCCGCAAGGCC
AAGCAGGAGGCTCGCCCCAACGAGAAGCCCGACCTCGTCAAGACCCACCT
CCGTGACATGATCGTTGTCCCCGAGATGATCGGCAGCGTCATCGGTATCT
ACTCCGGTAAGGAGTTCAACCAGATCGAAGTCAAGCCCGAGATGGTTGGC
CACTACCTGGGTGAATTCTCTATCTCCTAAGATCAAGAAGAGAAGACAGT
TCCGCAAGTTCACCTACCGCGGTATTGACCTCGACCAAACGCCGAGGAGG
CTGCCGATGGCTGACGAGCACTACCAAGCCCGTCAAGCACGGTCGTCCCG
GTATCGGTGCCACCCACTCTTCCCGTTTCATTCCCCTCAAGTAAGCTCCT
TGACCTCTCCTCCGAACAGCTCCGTGATGTCGTTCACGCCCGCGCTCGTC
GTCGCTTCAACCGCGGTCTGAAGCGCAAGCCCATGGGTCTCATCAAGAAG
CTCCGCAAGGCCAAGCAGGAGGCTCGCCCCAACGAGAAGCCCGACCTCGT
CAAGACCCACCTCCGTGACATGATCGTTGTCCCCGAGATGATCGGCAGCG
TCATCGGTATCTACTCCGGTAAGGAGTTCAACCAGATCGAAGTCAAGCCC
GAGATGGTTGGCCACTACCTGGGTGAATTCTCTATCTCCTAAGATCAAGA
AGAGAAGACAGTTCCGCAAGTTCACCTACCGCGGTATTGACCTCGACCAA
ACGCCGAGGAGGCTGCCGATGGCTGACGAGCACTACCAAGCCCGTCAAGC
ACGGTCGTCCCGGTATCGGTGCCACCCACTCTTCCCGTTTCATTCCCCTC
AAGTAAGCTCCTTGACCTCTCCTCCGAACAGCTCCGTGATGTCGTTCACG
CCCGCGCTCGTCGTCGCTTCAACCGCGGTCTGAAGCGCAAGCCCATGGGT
CTCATCAAGAAGCTCCGCAAGGCCAAGCAGGAGGCTCGCCCCAACGAGAA
GCCCGACCTCGTCAAGACCCACCTCCGTGACATGATCGTTGTCCCCGAGA
TGATCGGCAGCGTCATCGGTATCTACTCCGGTAAGGAGTTCAACCAGATC
GAAGTCAAGCCCGAGATGGTTGGCCACTACCTGGGTGAATTCTCTATCTC
CTAAGATCAAGAAGAGAAGACAGTTCCGCAAGTTCACCTACCGCGGTATT
GACCTCGACCAAACGCCGAGGAGGCTGCCGATGGCTGACGAGCACTACCA
AGCCCGTCAAGCACGGTCGTCCCGGTATCGGTGCCACCCACTCTTCCCGT
TTCATTCCCCTCAAGTAAGCTCCTTGACCTCTCCTCCGAACAGCTCCGTG
ATGTCGTTCACGCCCGCGCTCGTCGTCGCTTCAACCGCGGTCTGAAGCGC
AAGCCCATGGGTCTCATCAAGAAGCTCCGCAAGGCCAAGCAGGAGGCTCG
CCCCAACGAGAAGCCCGACCTCGTCAAGACCCACCTCCGTGACATGATCG
TTGTCCCCGAGATGATCGGCAGCGTCATCGGTATCTACTCCGGTAAGGAG
TTCAACCAGATCGAAGTCAAGCCCGAGATGGTTGGCCACTACCTGGGTGA
ATTCTCTATCTCCTAAGATCAAGAAGAGAAGACAGTTCCGCAAGTTCACC
TACCGCGGTATTGACCTCGACCAAACGCCGAGGAGGCTGCCGATGGCTGA
CGAGCACTAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015935small ribosomal subunit
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS15M747DRAFT_294888Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294888-T1M747DRAFT_294888-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294888-T1.cdsM747DRAFT_294888-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294888-T1.utr3p1M747DRAFT_294888-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294888-T1.exon5M747DRAFT_294888-T1.exon5Aspergillus niger ATCC 13496exon
M747DRAFT_294888-T1.exon4M747DRAFT_294888-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_294888-T1.exon3M747DRAFT_294888-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_294888-T1.exon2M747DRAFT_294888-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_294888-T1.exon1M747DRAFT_294888-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294888-T1.utr5p1M747DRAFT_294888-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092658SK
DBxrefInterPro:IPR020934
DBxrefInterPro:IPR023575
DBxrefInterPro:IPR005713
DBxrefInterPro:IPR002222
DBxrefPFAM:PF00203
Productribosomal protein S15
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851910.1supercontigKZ851910.1:589133..590535 -
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