You are here

Home

M747DRAFT_294978-T1, M747DRAFT_294978-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_294978-T1
Unique NameM747DRAFT_294978-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851911.1:31428..32633+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_294978-T1 ID=M747DRAFT_294978-T1|Name=M747DRAFT_294978-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1206bp|location=Sequence derived from alignment at KZ851911.1:31428..32633+ (Aspergillus niger ATCC 13496)
ATTTCCCTTTCCACCAACCACACTCTTCCACCTCAATCCAACAACAATAC
CACCACCACCACCACAACCACCACAATGTCCCTCCCCGACACCTACCTCG
CGGCCACCGTGCCCACCCCCCAATCACCCCACACCCTAACCACCCACCCC
GTGCCCTCCCCCAACGCCAACGAAGTCCTCATAAAAATCACCGCCACGGC
CGTCAACCCCGTCGACTGGAAGATGCGCGACTACAACTTCTTCCTGACCG
AATACCCCGCCGTCCTCGGCTCCGACGCCTCGGGCACCATCGCCGCCGTG
GGCTCCAACGTCACCACCTTCACCCCAGGCGACCGGGTCTTCTTCCAAGG
CATAATTGGCAACTACGCCGCCTCGACCTTCCAGCAATACTGCGTGATGC
CGGCAGAGCTCGTCTCGCGAACCCCCTCCAACATCTCCGACGAGCAAGCC
GCGGGGATCAGTCTAGCGAGCGTGGCCGTCGTGACGGGAATGTATGATAG
CACGGGGCACGGAATCACACCTGCTCCCTGGGCCGAGGGCGGTGATGCGG
CAGGCAAGGGCAAGGCGATTGCTATTTTGGGCGGAGCGTCGAGTGTAGGA
CAGTATGCGATTCAGTTTGCAAGGTTGAGCGGGTTCACGAAGATTATTAC
GAATGCGAGCGTCGTGCATAGGGAGTATTTGCAGGGGCTGGGAGCGCATG
TGGTGCTGGATCGGAAGATTGCCAAGGCGGAGGACTTTGTTGCTGCGGCT
GGGGAGGTGCCGACTCGTTATGTGTATGATGCCATTTCGATGAAGGAGAC
GCAGGTGCTCGGGGTGGAGATTGCAAAGGCAAGTAAGGGGGCTGCGAAGG
CGGTGGTGACGGTGTTGGGTGCGGAGAAGGAGGCGGCGGAGTTGGGGAAG
GAGGGCGAACATCAGGTGGAGGTTAGGCAGATTTTGGGTATTGGGGCTTC
TCCCAAGTTGAGACATGTTAGTGAGCCCATGGTGAAGGCGCTTGGAGGTG
AGGATGGATGGATTGCGAAGGGACTGTTTGTGCCGAATCGCGTGCGCGTG
GTTCCTGGTGGATTGGGGGCTGTTGAGGAGGCGTTGAAGACAAATAAGGA
GGGGGTTTCCGGGGAGAAGGTGGTCTTCCGTCCCAATGAGGGTGCGTAGG
GAGGACTAGTATAGACTTGAAAAGTTGGTATAGTCTAATATATTATAATT
GGTTGG
back to top

Coding sequence (CDS) from alignment at KZ851911.1:31428..32633+

>M747DRAFT_294978-T1 ID=M747DRAFT_294978-T1|Name=M747DRAFT_294978-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1074bp|location=Sequence derived from alignment at KZ851911.1:31428..32633+ (Aspergillus niger ATCC 13496)
ATGTCCCTCCCCGACACCTACCTCGCGGCCACCGTGCCCACCCCCCAATC
ACCCCACACCCTAACCACCCACCCCGTGCCCTCCCCCAACGCCAACGAAG
TCCTCATAAAAATCACCGCCACGGCCGTCAACCCCGTCGACTGGAAGATG
CGCGACTACAACTTCTTCCTGACCGAATACCCCGCCGTCCTCGGCTCCGA
CGCCTCGGGCACCATCGCCGCCGTGGGCTCCAACGTCACCACCTTCACCC
CAGGCGACCGGGTCTTCTTCCAAGGCATAATTGGCAACTACGCCGCCTCG
ACCTTCCAGCAATACTGCGTGATGCCGGCAGAGCTCGTCTCGCGAACCCC
CTCCAACATCTCCGACGAGCAAGCCGCGGGGATCAGTCTAGCGAGCGTGG
CCGTCGTGACGGGAATGTATGATAGCACGGGGCACGGAATCACACCTGCT
CCCTGGGCCGAGGGCGGTGATGCGGCAGGCAAGGGCAAGGCGATTGCTAT
TTTGGGCGGAGCGTCGAGTGTAGGACAGTATGCGATTCAGTTTGCAAGGT
TGAGCGGGTTCACGAAGATTATTACGAATGCGAGCGTCGTGCATAGGGAG
TATTTGCAGGGGCTGGGAGCGCATGTGGTGCTGGATCGGAAGATTGCCAA
GGCGGAGGACTTTGTTGCTGCGGCTGGGGAGGTGCCGACTCGTTATGTGT
ATGATGCCATTTCGATGAAGGAGACGCAGGTGCTCGGGGTGGAGATTGCA
AAGGCAAGTAAGGGGGCTGCGAAGGCGGTGGTGACGGTGTTGGGTGCGGA
GAAGGAGGCGGCGGAGTTGGGGAAGGAGGGCGAACATCAGGTGGAGGTTA
GGCAGATTTTGGGTATTGGGGCTTCTCCCAAGTTGAGACATGTTAGTGAG
CCCATGGTGAAGGCGCTTGGAGGTGAGGATGGATGGATTGCGAAGGGACT
GTTTGTGCCGAATCGCGTGCGCGTGGTTCCTGGTGGATTGGGGGCTGTTG
AGGAGGCGTTGAAGACAAATAAGGAGGGGGTTTCCGGGGAGAAGGTGGTC
TTCCGTCCCAATGAGGGTGCGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_294978M747DRAFT_294978Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294978-T1.utr5p1M747DRAFT_294978-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294978-T1.exon1M747DRAFT_294978-T1.exon1Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294978-T1.cdsM747DRAFT_294978-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294978-T1.utr3p1M747DRAFT_294978-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294978-T1M747DRAFT_294978-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_8519111.1
NoteEggNog:ENOG41
NoteSMCOG1028:crotonyl-CoA reductase / alcohol dehydrogenase
DBxrefInterPro:IPR011032
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR013154
DBxrefInterPro:IPR020843
DBxrefPFAM:PF08240
Productputative secondary metabolism biosynthetic enzyme
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851911.1supercontigKZ851911.1:31428..32633 +
Powered by Drupal