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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851912.1:161144..162178- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_295202-T1 ID=M747DRAFT_295202-T1|Name=M747DRAFT_295202-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1035bp|location=Sequence derived from alignment at KZ851912.1:161144..162178- (Aspergillus niger ATCC 13496)
CTAGCCACCATGCCTCAGGAAATCTCCGACATCAAGCAGTTCATCGAGGT
CTGCCGCCGCAAGGATGCGTCCTGTACGTTTACCCGACCTTTAGCCGCTT
AGTTATCATGAGGTGGAAAGCTCCGCGGAGCTAGCTCTTTGAGGGGGAAG
CTCGAGACGGGTACCCGACTATCATCAAAAGGGCAAATTGGAATGGTTGA
TCGGGATGGATGAATGATAAGAAGTGGAGGCTAACGCGTGATGGTCTTGT
CTTTCAAACAGCTGCTCGCATCAAGCGCAACCCCAAGGACCAGCAGATCA
AGTTCAAGGTCCGCTGCTCCCGCTTCGTCTACACCCTTGTCCTGAAGGAC
TCCGACAAGGCCGACAAGCTCAAGCAGAGCCTGCCCCCTGGTGCGTTTGC
TCCCGTCACCTGATCGACTGTTTCTTTGGATGGTGTTATGGAACAAGATA
CATGTCGTCGGACGCGTTTGTTTCCTTACGACTTGAGATGGGCATTGATG
TGGACCTCGGCTATTGCATGACATCATTCGGATTGAGTACTAACATCAAT
TGTTTTCTCACACAGCTCTCAAGGTTGTCGACGTCTCCAAGGGAGACAAG
AAGAAGGCTCTGTAAATACCTTCATCAACACATTGAGGTTGGGACTCGGC
GAGGAGGTCGTCGGCGCATGGAATTTAGTCGAAGCATGAATACACTTGTC
GATTACGATTAGGAAATTGGCATGGACATGGATTGCTTCTGTGGGCCGGC
ACGGAGGGTTAATCTATCCTTGAACCAGATTGGTTGTCTCTTCGCGTCTG
GTTACCAGTGGACTCTGATATATGTCTTCACATTTCACTGAAACCGGATG
ACCTACATGACTGGAACTTTTCTGCTAAGGGATTAGCTTTGTCGGAGCAC
CTTGCATCCTATACAACGTAATGGAGAAAAACAGTTGAAAATTCCATGAT
ACCTCCACTTTCTCCCGATGATGTTATATGAGTCCTTGTGCCCTGGCTAT
GCTGCGTTGACTGAACAGGCATTGCTAGTCTTGGT back to topCoding sequence (CDS) from alignment at KZ851912.1:161144..162178- >M747DRAFT_295202-T1 ID=M747DRAFT_295202-T1|Name=M747DRAFT_295202-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=729bp|location=Sequence derived from alignment at KZ851912.1:161144..162178- (Aspergillus niger ATCC 13496)
CTCTCAAGGTTGTCGACGTCTCCAAGGGAGACAAGAAGAAGGCTCTGTAA
CTGCTCGCATCAAGCGCAACCCCAAGGACCAGCAGATCAAGTTCAAGGTC
CGCTGCTCCCGCTTCGTCTACACCCTTGTCCTGAAGGACTCCGACAAGGC
CGACAAGCTCAAGCAGAGCCTGCCCCCTGATGCCTCAGGAAATCTCCGAC
ATCAAGCAGTTCATCGAGGTCTGCCGCCGCAAGGATGCGTCCTCTCTCAA
GGTTGTCGACGTCTCCAAGGGAGACAAGAAGAAGGCTCTGTAACTGCTCG
CATCAAGCGCAACCCCAAGGACCAGCAGATCAAGTTCAAGGTCCGCTGCT
CCCGCTTCGTCTACACCCTTGTCCTGAAGGACTCCGACAAGGCCGACAAG
CTCAAGCAGAGCCTGCCCCCTGATGCCTCAGGAAATCTCCGACATCAAGC
AGTTCATCGAGGTCTGCCGCCGCAAGGATGCGTCCTCTCTCAAGGTTGTC
GACGTCTCCAAGGGAGACAAGAAGAAGGCTCTGTAACTGCTCGCATCAAG
CGCAACCCCAAGGACCAGCAGATCAAGTTCAAGGTCCGCTGCTCCCGCTT
CGTCTACACCCTTGTCCTGAAGGACTCCGACAAGGCCGACAAGCTCAAGC
AGAGCCTGCCCCCTGATGCCTCAGGAAATCTCCGACATCAAGCAGTTCAT
CGAGGTCTGCCGCCGCAAGGATGCGTCCT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265OQH |
| DBxref | InterPro:IPR038464 |
| DBxref | InterPro:IPR002675 |
| DBxref | PFAM:PF01781 |
| Product | 60S ribosomal protein L38 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851912.1 | supercontig | KZ851912.1:161144..162178 - |
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