You are here

Home

M747DRAFT_295415-T1, M747DRAFT_295415-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_295415-T1
Unique NameM747DRAFT_295415-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851913.1:141471..143482-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_295415-T1 ID=M747DRAFT_295415-T1|Name=M747DRAFT_295415-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2012bp|location=Sequence derived from alignment at KZ851913.1:141471..143482- (Aspergillus niger ATCC 13496)
CCCTGAATCGCGTTGCCTTGACTTGTCATTCTTTCTTTTCCCCGTTATTG
CAACGGGAACAGCGCACCCGGCCTCAAACATCATGCTCAGCGGCCCGTTT
GGCTGAATCGCGTGAAATTGAAACGCTTAAAACACATTCGTTAGAGTAAG
CTGTTGCTTGTCATAATTCATTCGGTCACCCAAGCCCACCCACGGGAAGC
AGAACCTCCACAAGGGGGCACAGAGGGTTGATCGAGGGTAGTACTGCCAA
TGATGTTTCGAAAATCCGCTTCCCTCCTGGGCCAACGGCTCATGGCCGTT
TGTCTCCTGTGCTGGTGCGTTTCGCTAGCGACCGCCGCAAGCACAGAAGA
ATGGAAGACGCGATCCATCTACCAGACGATGACGGATCGGTTTGCCCTCA
CCAACGGTTCGACGACCGCACCATGCAATACTACGGTAGCCAACTACTGT
GGCGGGTCTTGGCAGGGGACGATCGATAAGCTGGACTACATCCAAGGCAT
GGGGTTCGATGCGATCATGATCTCTCCCGTAATTAAAAACATTGCGGGGC
GATCTAAGGACGGTGAGGCCTACCATGGATACTGGCCTCTGGATCTATAC
GAGATCAATTCTCATTTCGGAACCCGGGAGGAACTGTTGAAGCTGAGCGA
GGAGATCCACGCACGCGGCATGTACTTGCTGCTGGACGTCGTCATCAATA
ATATGGCTTACATGACGGACGGCGAGGATCCTGCGACGACCATTGACTAC
AATGTTTTCCCTCAGTTCAATGGATCTTCATACTTCCACCCCTACTGTCT
TATTACGAACTGGAATAACTATACGGACGCGCAGTGGTGTCAGACTGGTG
ACAATTATACTGCACTCCCAGATCTGTACACAGAACACACCGCGGTGCAG
AACATCTTAATGGACTGGAGTAAATCGGTCATCAGCAATTACTCCGTCGA
CGGGCTACGAATCGACGCTGCCAAGTCCCTCACTCCCAGCTTTCTGCCTA
CATATGCGAGTACCGTGGGCGGATTCATGACCGGCGAAGTCATGGATTCG
AACGCCACCAACGTGTGCAAATATCAGACGGATTACCTGCCAAGTCTTCC
AAACTACCCCCTCTATTACTCCATGATCACGGCCTTCCTCAACGGCGAGC
CTGCGACCTTGCTCGAGGAAATCGCGACGATCAATGATCTTTGCCCTGAT
ACGTTCGCAATGGTCAACTTCATCGAAGATCAAGACGTTGACCGATGGGC
CTACATGAATGACGACATCATGCTAGCTAAAACTGCACTGACCTTCATGA
TGCTCTACGACGGTATTCCCTTGGTCTACCAGGGTCTGGAGCAGGCCATT
GCCTATTCCAACCGAGCGGCCTTGTGGTTGACAGATTTCGACACCAATGC
GACGCTTTATAAACACATCAAGAAACTCAATGCCATCCGCAAACATGCCA
TTAACCTTGATTCCAGCTACATCAGTTCGAAAACATATCCCATCTATCAA
GGAGGTAGCGAGTTGGCTTTCTGGAAGGGCAACAATGGACGCCAAGTCAT
CATGGTTTTATCTACGGCGGGCTCGAATGGTTCAGCTTATACTCTGACAC
TACCCGTAAGCTATGGGGCTAGTGAGGTGGTCACGGAAGTGCTGAACTGC
GTCAATTATACGGTCAACACTTACAGTCAATTGGTCGTGGACATGGATAA
GGGCGAACCTCGGGTCTTCTTTCCCGCTTCGATGATGCCGGGGAGCGGGC
TGTGTGGCTACAATACTTCTAATGTGACGTATTCTGAGCTGAGACTTGCT
GCTGTGGGATCTTCGTCGTCTGCTGGTAGCCACTCTGTCATACCGTCTGC
TTTTGCTTCGCTTTTCATGGCGATAGTTGCATTTTTGGCATTCCGGATAT
AAGTTCATATTTTTTCTACTCAGTTTTATACCAGCAAATAAAACGATGTC
CTATGAATATACACATTTCAAAAGTGGAGACAAAATTATATCTTTATATC
CCTAGCACCTCC
back to top

Coding sequence (CDS) from alignment at KZ851913.1:141471..143482-

>M747DRAFT_295415-T1 ID=M747DRAFT_295415-T1|Name=M747DRAFT_295415-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1653bp|location=Sequence derived from alignment at KZ851913.1:141471..143482- (Aspergillus niger ATCC 13496)
ATGATGTTTCGAAAATCCGCTTCCCTCCTGGGCCAACGGCTCATGGCCGT
TTGTCTCCTGTGCTGGTGCGTTTCGCTAGCGACCGCCGCAAGCACAGAAG
AATGGAAGACGCGATCCATCTACCAGACGATGACGGATCGGTTTGCCCTC
ACCAACGGTTCGACGACCGCACCATGCAATACTACGGTAGCCAACTACTG
TGGCGGGTCTTGGCAGGGGACGATCGATAAGCTGGACTACATCCAAGGCA
TGGGGTTCGATGCGATCATGATCTCTCCCGTAATTAAAAACATTGCGGGG
CGATCTAAGGACGGTGAGGCCTACCATGGATACTGGCCTCTGGATCTATA
CGAGATCAATTCTCATTTCGGAACCCGGGAGGAACTGTTGAAGCTGAGCG
AGGAGATCCACGCACGCGGCATGTACTTGCTGCTGGACGTCGTCATCAAT
AATATGGCTTACATGACGGACGGCGAGGATCCTGCGACGACCATTGACTA
CAATGTTTTCCCTCAGTTCAATGGATCTTCATACTTCCACCCCTACTGTC
TTATTACGAACTGGAATAACTATACGGACGCGCAGTGGTGTCAGACTGGT
GACAATTATACTGCACTCCCAGATCTGTACACAGAACACACCGCGGTGCA
GAACATCTTAATGGACTGGAGTAAATCGGTCATCAGCAATTACTCCGTCG
ACGGGCTACGAATCGACGCTGCCAAGTCCCTCACTCCCAGCTTTCTGCCT
ACATATGCGAGTACCGTGGGCGGATTCATGACCGGCGAAGTCATGGATTC
GAACGCCACCAACGTGTGCAAATATCAGACGGATTACCTGCCAAGTCTTC
CAAACTACCCCCTCTATTACTCCATGATCACGGCCTTCCTCAACGGCGAG
CCTGCGACCTTGCTCGAGGAAATCGCGACGATCAATGATCTTTGCCCTGA
TACGTTCGCAATGGTCAACTTCATCGAAGATCAAGACGTTGACCGATGGG
CCTACATGAATGACGACATCATGCTAGCTAAAACTGCACTGACCTTCATG
ATGCTCTACGACGGTATTCCCTTGGTCTACCAGGGTCTGGAGCAGGCCAT
TGCCTATTCCAACCGAGCGGCCTTGTGGTTGACAGATTTCGACACCAATG
CGACGCTTTATAAACACATCAAGAAACTCAATGCCATCCGCAAACATGCC
ATTAACCTTGATTCCAGCTACATCAGTTCGAAAACATATCCCATCTATCA
AGGAGGTAGCGAGTTGGCTTTCTGGAAGGGCAACAATGGACGCCAAGTCA
TCATGGTTTTATCTACGGCGGGCTCGAATGGTTCAGCTTATACTCTGACA
CTACCCGTAAGCTATGGGGCTAGTGAGGTGGTCACGGAAGTGCTGAACTG
CGTCAATTATACGGTCAACACTTACAGTCAATTGGTCGTGGACATGGATA
AGGGCGAACCTCGGGTCTTCTTTCCCGCTTCGATGATGCCGGGGAGCGGG
CTGTGTGGCTACAATACTTCTAATGTGACGTATTCTGAGCTGAGACTTGC
TGCTGTGGGATCTTCGTCGTCTGCTGGTAGCCACTCTGTCATACCGTCTG
CTTTTGCTTCGCTTTTCATGGCGATAGTTGCATTTTTGGCATTCCGGATA
TAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO:0004556alpha-amylase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0016052carbohydrate catabolic process
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_295415M747DRAFT_295415Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295415-T1.cdsM747DRAFT_295415-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295415-T1.utr3p1M747DRAFT_295415-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295415-T1.exon1M747DRAFT_295415-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295415-T1.utr5p1M747DRAFT_295415-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295415-T1M747DRAFT_295415-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-29)
NoteCAZy:GH13_15
NoteCAZy:GH13_27
NoteCAZy:GH13_7
NoteCAZy:GH13_19
NoteCAZy:GH13_20
NoteCAZy:GH13_36
NoteCAZy:GH13_2
NoteCAZy:GH13
NoteCAZy:GH13_1
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR013780
DBxrefInterPro:IPR015340
DBxrefInterPro:IPR013777
DBxrefInterPro:IPR006047
DBxrefPFAM:PF09260
DBxrefPFAM:PF00128
Productalpha-amylase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851913.1supercontigKZ851913.1:141471..143482 -
Powered by Drupal