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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851913.1:408774..410156+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_295473-T1 ID=M747DRAFT_295473-T1|Name=M747DRAFT_295473-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1383bp|location=Sequence derived from alignment at KZ851913.1:408774..410156+ (Aspergillus niger ATCC 13496)
CCTTGCTCCTACTCTGAGCCTGTCACCCCCCAGCTGCGCCTTCCTCCGCC
AATCTCTCTCCGACACAAAATTTGCCATCCGCGCTATTTTGTCTCTTCCC
CTCCGACACGACCGCTCTCCCTCCCATCACCACAATCCCGCCGCTGCATC
CTCTTCAACCACCTCTCACTTTCCCCTCACTTCCTCACTCAACTTTCATA
ATGGCCGCTGTTGCTGAGAACGGCCACGCGCCCGTGGCTGACGAGAACGC
CGCCCCCGTTGCTGCCGCCGTCGAACAGAAGGAACAGACCGAGAAGACGA
ATGGAGACTCTGTCACAGTATTCCACGACCCCGAAAACTTCAATGTGAAG
CATCCTTTGATGCACGAGTGGACTCTGTGGTTTACCAAGCCCCCTAGCGG
CAAGGTACGGATTCTTGCCGAATCAGACGCAGCAGTGGATCAGACAACTA
ACCTTTCCTGTGCGATAGGGCGATAACTGGAATGATCTGTTGAAGGAAGT
CGTGACTTTCAACTCCGTTGAGGAATTCTGGGGTATCTACGTATGTGTTC
TTTTTTTGGGTTCACCGAGGAGACCTGCCCGCTAACCAATGCTTCCATAG
AACAACATCTCGCCGACATCCGAGTTGGGCCTCAAAGCAGACTACCATCT
CTTCAAGAAGGGAGTTCGTCCCGAGTGGGAAGACCCCCAGAACAAGCACG
GAGGCAAGTGGTCATACTCTTTCAAGGACAAGCGCTCCGTGCCCATCGAC
GACCTGTGGCTGCACGCACAACTGGCCGCTATTGGCGAGACTCTTGAGAA
CGACGGTGACAACGAGGTTATGGGTGTTGTTGTGAACGTACGCAAGGGCT
TCTACCGTGTTGGTCTGTGGACTCGGACTGTTGGCAAGAGTATCCCCGGA
GACAAGAATGGTCGCACACCCGCACAGGGCAAGGAGATCCTCGAGAACAT
CGGCCGGCGCTTCAAGGAAGTCCTTCGTCTCAAGGAGGCTGATGCCGTTG
AGTTCTCGGGTCACACGGACAGCGCACACAGCGGCAGCACGAGAGCCAAG
GCCAAGTACACTGTCTAAGGTATATAACCTGTGTGTGCAGCTCCATTTAC
GAGGTATTCATTGCGGATCTGTTTCTTTGCTACGGAATAATGGGAAGTCT
TTGTGACGATGGTTGATAACGAATCCGAATGGACCGGCATGAGGAAATGC
GCGTCCGACTTGCTTGCATTTGCAGTTACAGTGGTGGTTCGGTCATAGGC
ACTGATGGCATGTTTCTTTCCCTCAGTACGTATTTCTGACGAGGTTTATA
CCATATTTCATCGAGTTATAGCTTTACGCCTCTAGTGGCCCACAAAATAA
CGAAAAACACTCTTAAAACATCTTATTCTAGTG back to topCoding sequence (CDS) from alignment at KZ851913.1:408774..410156+ >M747DRAFT_295473-T1 ID=M747DRAFT_295473-T1|Name=M747DRAFT_295473-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2232bp|location=Sequence derived from alignment at KZ851913.1:408774..410156+ (Aspergillus niger ATCC 13496)
ATGGCCGCTGTTGCTGAGAACGGCCACGCGCCCGTGGCTGACGAGAACGC
CGCCCCCGTTGCTGCCGCCGTCGAACAGAAGGAACAGACCGAGAAGACGA
ATGGAGACTCTGTCACAGTATTCCACGACCCCGAAAACTTCAATGTGAAG
CATCCTTTGATGCACGAGTGGACTCTGTGGTTTACCAAGCCCCCTAGCGG
CAAGGGCGATAACTGGAATGATCTGTTGAAGGAAGTCGTGACTTTCAACT
CCGTTGAGGAATTCTGGGGTATCTACAACAACATCTCGCCGACATCCGAG
TTGGGCCTCAAAGCAGACTACCATCTCTTCAAGAAGGGAGTTCGTCCCGA
GTGGGAAGACCCCCAGAACAAGCACGGAGGCAAGTGGTCATACTCTTTCA
AGGACAAGCGCTCCGTGCCCATCGACGACCTGTGGCTGCACGCACAACTG
GCCGCTATTGGCGAGACTCTTGAGAACGACGGTGACAACGAGGTTATGGG
TGTTGTTGTGAACGTACGCAAGGGCTTCTACCGTGTTGGTCTGTGGACTC
GGACTGTTGGCAAGAGTATCCCCGGAGACAAGAATGGTCGCACACCCGCA
CAGGGCAAGGAGATCCTCGAGAACATCGGCCGGCGCTTCAAGGAAGTCCT
TCGTCTCAAGGAGGCTGATGCCGTTGAGTTCTCGGGTCACACGGACAGCG
CACACAGCGGCAGCACGAGAGCCAAGGCCAAGTACACTGTCTAAATGGCC
GCTGTTGCTGAGAACGGCCACGCGCCCGTGGCTGACGAGAACGCCGCCCC
CGTTGCTGCCGCCGTCGAACAGAAGGAACAGACCGAGAAGACGAATGGAG
ACTCTGTCACAGTATTCCACGACCCCGAAAACTTCAATGTGAAGCATCCT
TTGATGCACGAGTGGACTCTGTGGTTTACCAAGCCCCCTAGCGGCAAGGG
CGATAACTGGAATGATCTGTTGAAGGAAGTCGTGACTTTCAACTCCGTTG
AGGAATTCTGGGGTATCTACAACAACATCTCGCCGACATCCGAGTTGGGC
CTCAAAGCAGACTACCATCTCTTCAAGAAGGGAGTTCGTCCCGAGTGGGA
AGACCCCCAGAACAAGCACGGAGGCAAGTGGTCATACTCTTTCAAGGACA
AGCGCTCCGTGCCCATCGACGACCTGTGGCTGCACGCACAACTGGCCGCT
ATTGGCGAGACTCTTGAGAACGACGGTGACAACGAGGTTATGGGTGTTGT
TGTGAACGTACGCAAGGGCTTCTACCGTGTTGGTCTGTGGACTCGGACTG
TTGGCAAGAGTATCCCCGGAGACAAGAATGGTCGCACACCCGCACAGGGC
AAGGAGATCCTCGAGAACATCGGCCGGCGCTTCAAGGAAGTCCTTCGTCT
CAAGGAGGCTGATGCCGTTGAGTTCTCGGGTCACACGGACAGCGCACACA
GCGGCAGCACGAGAGCCAAGGCCAAGTACACTGTCTAAATGGCCGCTGTT
GCTGAGAACGGCCACGCGCCCGTGGCTGACGAGAACGCCGCCCCCGTTGC
TGCCGCCGTCGAACAGAAGGAACAGACCGAGAAGACGAATGGAGACTCTG
TCACAGTATTCCACGACCCCGAAAACTTCAATGTGAAGCATCCTTTGATG
CACGAGTGGACTCTGTGGTTTACCAAGCCCCCTAGCGGCAAGGGCGATAA
CTGGAATGATCTGTTGAAGGAAGTCGTGACTTTCAACTCCGTTGAGGAAT
TCTGGGGTATCTACAACAACATCTCGCCGACATCCGAGTTGGGCCTCAAA
GCAGACTACCATCTCTTCAAGAAGGGAGTTCGTCCCGAGTGGGAAGACCC
CCAGAACAAGCACGGAGGCAAGTGGTCATACTCTTTCAAGGACAAGCGCT
CCGTGCCCATCGACGACCTGTGGCTGCACGCACAACTGGCCGCTATTGGC
GAGACTCTTGAGAACGACGGTGACAACGAGGTTATGGGTGTTGTTGTGAA
CGTACGCAAGGGCTTCTACCGTGTTGGTCTGTGGACTCGGACTGTTGGCA
AGAGTATCCCCGGAGACAAGAATGGTCGCACACCCGCACAGGGCAAGGAG
ATCCTCGAGAACATCGGCCGGCGCTTCAAGGAAGTCCTTCGTCTCAAGGA
GGCTGATGCCGTTGAGTTCTCGGGTCACACGGACAGCGCACACAGCGGCA
GCACGAGAGCCAAGGCCAAGTACACTGTCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
| GO:0003743 | translation initiation factor activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006413 | translational initiation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092646VF |
| DBxref | InterPro:IPR019770 |
| DBxref | InterPro:IPR001040 |
| DBxref | InterPro:IPR023398 |
| DBxref | PFAM:PF01652 |
| Product | mRNA-cap binding subunit |
| Product | translation initiation factor 4E |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851913.1 | supercontig | KZ851913.1:408774..410156 + |
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