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M747DRAFT_295588-T1, M747DRAFT_295588-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_295588-T1
Unique NameM747DRAFT_295588-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851914.1:39570..41124-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_295588-T1 ID=M747DRAFT_295588-T1|Name=M747DRAFT_295588-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1555bp|location=Sequence derived from alignment at KZ851914.1:39570..41124- (Aspergillus niger ATCC 13496)
GTAAAATTTTTGACCAATCATTTTGCATTTTGGGGGGCTTAGTGGAGGCG
CAAATATTATGTAACTGGATAGGGCCGACGCCTCGCTTAGCCGACTTTTC
TGTGGGATTTCGATTTCTACATTCATCCCGCGATCGAGCAGCAAGCAGCA
AGCAGCGACAATCGATTCGACTCACCTCCACCAGAGCGTGTGGTGTGATA
TCCTAGTCTGTCTTCAAGCCGCGCAAGATAGACACGAGTCGCAAATATGG
CCGTTGGAAAGTACGTGAATGCCCTACTCTATTATGATTTATGTTGCAGC
AATTCGATTGTAGTAGTCTCTTACTGATTTTATGGCAGGAACAAGCGCTT
GTCGAAGGGCAAGAAGGGTGTTAAGAAGAGAACTGTCGACCCTTTCACCC
GGAAAGACGAGTACTCTGTGAAGGTAAGTGTGCAACTTGAGGGTGTGTGG
ATTTTGCTGACAGGAATAGGCTCCCTCGACCTTCCAGACCAGAGAGTATG
GCATCGCCCCTCCCCCCCAAATTTCGTCGTCGGGACTTTCAGATATTCTT
TCGCCTCGTTATAATCATTTTTTGTCGCATTCCCCATGTGCAAACCAGTC
ACTGACCAGTTCTTGTTGAAGTGTTGGAAAGACTCTGGTGAACCGTACCA
GTGGTCTGAAGAACGCGAACGATTCCCTGAAGGGCCGTATCTTCGAAGTC
TCCCTTGCCGACTTGCAGAATGACGAGGACCATGCCTTCCGTAAGGTCAA
GCTCCGCGTGGACGAAATCCAGGGAAAGAACTGCCTGACCAACTTCCACG
GTCTGGATTTCACGACCGACAAGCTGCGATCCCTTGTGCGCAAGTGGCAG
TCGCTGATTGAAGCCAACGTCACTGTGAAGACGACCGATGACTATCTTCT
CCGTCTGTTCGCCATCGCCTTCACGAAGAGACGCCCCAACCAAATCAAGA
AGACTACATATGCTCGCTCGTCCCAAATCCGCGCTATTCGCAAGAAGATG
ACCGAGATCATGCAGCGCGAGGCCGCTAGCTGCTCTCTCGCTCAGCTTAC
TACCAAGTTGATCCCCGAAGTCATCGGTCGTGAGATTGAGAAGGCTACCC
AGGGAATTTACCCCCTGCAGAACGTTCGTCCCCCTCGACCCTCGTATTCT
ATCAAATGATTGCGATCCATCTAATACTCTATTAGGTCCACATTCGCAAG
GTCAAGCTTCTTAAGTCCCCCAAGTTCGACCTCGGTGCCCTCCTTAACTT
GCACGGCGAGTCTACAACCGATGATAAGGGACACAAGGTTGAGAGAGAGT
TCAAGGAACAGGTTCTTGAGAGCGTGTAAGCTTTAGCTATCCGCTGGTCA
TGGATTCTGGTTGCTCTGCCGTCTTGGGTTCACGGTGCCACTGCTCCAAG
TATGATAAGTTTATGTCAAAAGTAGTGTCATTAGCCAACAAATGACAGTA
TATGCAAGTTTTTCACAACGCCTTTGAGCTTTTAACTAGGCCTCGTCGTT
GGGACGGTTACATATTATTCTTGCGAGAAGCAGAAGGGTAGATATCTTAT
ATGGT
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Coding sequence (CDS) from alignment at KZ851914.1:39570..41124-

>M747DRAFT_295588-T1 ID=M747DRAFT_295588-T1|Name=M747DRAFT_295588-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3855bp|location=Sequence derived from alignment at KZ851914.1:39570..41124- (Aspergillus niger ATCC 13496)
GTCCACATTCGCAAGGTCAAGCTTCTTAAGTCCCCCAAGTTCGACCTCGG
TGCCCTCCTTAACTTGCACGGCGAGTCTACAACCGATGATAAGGGACACA
AGGTTGAGAGAGAGTTCAAGGAACAGGTTCTTGAGAGCGTGTAATGTTGG
AAAGACTCTGGTGAACCGTACCAGTGGTCTGAAGAACGCGAACGATTCCC
TGAAGGGCCGTATCTTCGAAGTCTCCCTTGCCGACTTGCAGAATGACGAG
GACCATGCCTTCCGTAAGGTCAAGCTCCGCGTGGACGAAATCCAGGGAAA
GAACTGCCTGACCAACTTCCACGGTCTGGATTTCACGACCGACAAGCTGC
GATCCCTTGTGCGCAAGTGGCAGTCGCTGATTGAAGCCAACGTCACTGTG
AAGACGACCGATGACTATCTTCTCCGTCTGTTCGCCATCGCCTTCACGAA
GAGACGCCCCAACCAAATCAAGAAGACTACATATGCTCGCTCGTCCCAAA
TCCGCGCTATTCGCAAGAAGATGACCGAGATCATGCAGCGCGAGGCCGCT
AGCTGCTCTCTCGCTCAGCTTACTACCAAGTTGATCCCCGAAGTCATCGG
TCGTGAGATTGAGAAGGCTACCCAGGGAATTTACCCCCTGCAGAACGCTC
CCTCGACCTTCCAGACCAGAGAGAACAAGCGCTTGTCGAAGGGCAAGAAG
GGTGTTAAGAAGAGAACTGTCGACCCTTTCACCCGGAAAGACGAGTACTC
TGTGAAGATGGCCGTTGGAAAGTCCACATTCGCAAGGTCAAGCTTCTTAA
GTCCCCCAAGTTCGACCTCGGTGCCCTCCTTAACTTGCACGGCGAGTCTA
CAACCGATGATAAGGGACACAAGGTTGAGAGAGAGTTCAAGGAACAGGTT
CTTGAGAGCGTGTAATGTTGGAAAGACTCTGGTGAACCGTACCAGTGGTC
TGAAGAACGCGAACGATTCCCTGAAGGGCCGTATCTTCGAAGTCTCCCTT
GCCGACTTGCAGAATGACGAGGACCATGCCTTCCGTAAGGTCAAGCTCCG
CGTGGACGAAATCCAGGGAAAGAACTGCCTGACCAACTTCCACGGTCTGG
ATTTCACGACCGACAAGCTGCGATCCCTTGTGCGCAAGTGGCAGTCGCTG
ATTGAAGCCAACGTCACTGTGAAGACGACCGATGACTATCTTCTCCGTCT
GTTCGCCATCGCCTTCACGAAGAGACGCCCCAACCAAATCAAGAAGACTA
CATATGCTCGCTCGTCCCAAATCCGCGCTATTCGCAAGAAGATGACCGAG
ATCATGCAGCGCGAGGCCGCTAGCTGCTCTCTCGCTCAGCTTACTACCAA
GTTGATCCCCGAAGTCATCGGTCGTGAGATTGAGAAGGCTACCCAGGGAA
TTTACCCCCTGCAGAACGCTCCCTCGACCTTCCAGACCAGAGAGAACAAG
CGCTTGTCGAAGGGCAAGAAGGGTGTTAAGAAGAGAACTGTCGACCCTTT
CACCCGGAAAGACGAGTACTCTGTGAAGATGGCCGTTGGAAAGTCCACAT
TCGCAAGGTCAAGCTTCTTAAGTCCCCCAAGTTCGACCTCGGTGCCCTCC
TTAACTTGCACGGCGAGTCTACAACCGATGATAAGGGACACAAGGTTGAG
AGAGAGTTCAAGGAACAGGTTCTTGAGAGCGTGTAATGTTGGAAAGACTC
TGGTGAACCGTACCAGTGGTCTGAAGAACGCGAACGATTCCCTGAAGGGC
CGTATCTTCGAAGTCTCCCTTGCCGACTTGCAGAATGACGAGGACCATGC
CTTCCGTAAGGTCAAGCTCCGCGTGGACGAAATCCAGGGAAAGAACTGCC
TGACCAACTTCCACGGTCTGGATTTCACGACCGACAAGCTGCGATCCCTT
GTGCGCAAGTGGCAGTCGCTGATTGAAGCCAACGTCACTGTGAAGACGAC
CGATGACTATCTTCTCCGTCTGTTCGCCATCGCCTTCACGAAGAGACGCC
CCAACCAAATCAAGAAGACTACATATGCTCGCTCGTCCCAAATCCGCGCT
ATTCGCAAGAAGATGACCGAGATCATGCAGCGCGAGGCCGCTAGCTGCTC
TCTCGCTCAGCTTACTACCAAGTTGATCCCCGAAGTCATCGGTCGTGAGA
TTGAGAAGGCTACCCAGGGAATTTACCCCCTGCAGAACGCTCCCTCGACC
TTCCAGACCAGAGAGAACAAGCGCTTGTCGAAGGGCAAGAAGGGTGTTAA
GAAGAGAACTGTCGACCCTTTCACCCGGAAAGACGAGTACTCTGTGAAGA
TGGCCGTTGGAAAGTCCACATTCGCAAGGTCAAGCTTCTTAAGTCCCCCA
AGTTCGACCTCGGTGCCCTCCTTAACTTGCACGGCGAGTCTACAACCGAT
GATAAGGGACACAAGGTTGAGAGAGAGTTCAAGGAACAGGTTCTTGAGAG
CGTGTAATGTTGGAAAGACTCTGGTGAACCGTACCAGTGGTCTGAAGAAC
GCGAACGATTCCCTGAAGGGCCGTATCTTCGAAGTCTCCCTTGCCGACTT
GCAGAATGACGAGGACCATGCCTTCCGTAAGGTCAAGCTCCGCGTGGACG
AAATCCAGGGAAAGAACTGCCTGACCAACTTCCACGGTCTGGATTTCACG
ACCGACAAGCTGCGATCCCTTGTGCGCAAGTGGCAGTCGCTGATTGAAGC
CAACGTCACTGTGAAGACGACCGATGACTATCTTCTCCGTCTGTTCGCCA
TCGCCTTCACGAAGAGACGCCCCAACCAAATCAAGAAGACTACATATGCT
CGCTCGTCCCAAATCCGCGCTATTCGCAAGAAGATGACCGAGATCATGCA
GCGCGAGGCCGCTAGCTGCTCTCTCGCTCAGCTTACTACCAAGTTGATCC
CCGAAGTCATCGGTCGTGAGATTGAGAAGGCTACCCAGGGAATTTACCCC
CTGCAGAACGCTCCCTCGACCTTCCAGACCAGAGAGAACAAGCGCTTGTC
GAAGGGCAAGAAGGGTGTTAAGAAGAGAACTGTCGACCCTTTCACCCGGA
AAGACGAGTACTCTGTGAAGATGGCCGTTGGAAAGTCCACATTCGCAAGG
TCAAGCTTCTTAAGTCCCCCAAGTTCGACCTCGGTGCCCTCCTTAACTTG
CACGGCGAGTCTACAACCGATGATAAGGGACACAAGGTTGAGAGAGAGTT
CAAGGAACAGGTTCTTGAGAGCGTGTAATGTTGGAAAGACTCTGGTGAAC
CGTACCAGTGGTCTGAAGAACGCGAACGATTCCCTGAAGGGCCGTATCTT
CGAAGTCTCCCTTGCCGACTTGCAGAATGACGAGGACCATGCCTTCCGTA
AGGTCAAGCTCCGCGTGGACGAAATCCAGGGAAAGAACTGCCTGACCAAC
TTCCACGGTCTGGATTTCACGACCGACAAGCTGCGATCCCTTGTGCGCAA
GTGGCAGTCGCTGATTGAAGCCAACGTCACTGTGAAGACGACCGATGACT
ATCTTCTCCGTCTGTTCGCCATCGCCTTCACGAAGAGACGCCCCAACCAA
ATCAAGAAGACTACATATGCTCGCTCGTCCCAAATCCGCGCTATTCGCAA
GAAGATGACCGAGATCATGCAGCGCGAGGCCGCTAGCTGCTCTCTCGCTC
AGCTTACTACCAAGTTGATCCCCGAAGTCATCGGTCGTGAGATTGAGAAG
GCTACCCAGGGAATTTACCCCCTGCAGAACGCTCCCTCGACCTTCCAGAC
CAGAGAGAACAAGCGCTTGTCGAAGGGCAAGAAGGGTGTTAAGAAGAGAA
CTGTCGACCCTTTCACCCGGAAAGACGAGTACTCTGTGAAGATGGCCGTT
GGAAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS1M747DRAFT_295588Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295588-T1M747DRAFT_295588-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295588-T1.cdsM747DRAFT_295588-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295588-T1.utr3p2M747DRAFT_295588-T1.utr3p2Aspergillus niger ATCC 13496three_prime_UTR
M747DRAFT_295588-T1.utr3p1M747DRAFT_295588-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295588-T1.exon6M747DRAFT_295588-T1.exon6Aspergillus niger ATCC 13496exon
M747DRAFT_295588-T1.exon5M747DRAFT_295588-T1.exon5Aspergillus niger ATCC 13496exon
M747DRAFT_295588-T1.exon4M747DRAFT_295588-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_295588-T1.exon3M747DRAFT_295588-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_295588-T1.exon2M747DRAFT_295588-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_295588-T1.exon1M747DRAFT_295588-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295588-T1.utr5p1M747DRAFT_295588-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027500
DBxrefInterPro:IPR018281
DBxrefInterPro:IPR001593
DBxrefPFAM:PF01015
Productribosomal 40S subunit protein S1B
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851914.1supercontigKZ851914.1:39570..41124 -
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