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M747DRAFT_295601-T1, M747DRAFT_295601-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_295601-T1
Unique NameM747DRAFT_295601-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851914.1:86521..87646-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_295601-T1 ID=M747DRAFT_295601-T1|Name=M747DRAFT_295601-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1126bp|location=Sequence derived from alignment at KZ851914.1:86521..87646- (Aspergillus niger ATCC 13496)
TCCGACACGGAGGGCAGGTCAGGTGACCCACAGAGTCAACCGTAGGGTTT
TCATTAAGCGAATACCTTCCAAATAATTCGACACTCGACACTGCGACAAT
CAACACGACAGCGCCGGACGATAGCCATGGCTCCCAAGGTGGAAAACAAG
CAAGGTAGGTACAATTTATGCGATTCATCCGTCTTCTTGAAATTTGCAGA
TTTGTTCTTGTCGAAAACCCGGTTTTGTGATCCTCGAATGGCATCTACAT
GTGGCGGTACTTCGGGGGATAAGGCCCTCTCAGCACGAACGAAAAAAAGG
CATTCCCGATGAACGATTCGAGCCCTGTGTTTCCCCCGTTATTGTCAACT
TGCATGGATCTTATTTCGAGCGAGCGATGGGCTATATTTTATTTTGAAGT
GACGGACGGGCTGACATTCTGGATCTATAGGCAAGACCAAGCCCAGCGAC
AAGGCTGGTGCTGCCGCCAAGGCAGTCATTAAGGGTGCTGGCGTACGTTC
TCACAAGGCTTCAAATCCGCCCATGCTCTGTTCGGTGCTAAATGTCATAT
AATTTTTCCAGGCGCACAAGGCTCGTAAGGTCCGCACCTCTACGACCTTC
CACCGCCCCAAGACCCTTCAGCTTTCCCGGTCGCCCAAGTACCCCCGCAA
GTCGATCCCCCATGTCCCTCGCCTCGATGCGCACAAGGTCATCCTCTACC
CTCTCAACACCGAGAGCGCCATGAAGAAGATCGAGGAGAACAACACCCTG
GTCTTCATCGTCGACGTCAAGTCCAACAAGCGCCAGATCAAGCTCGCCCT
CAAGAAGCTGTACGACGTTGACACCGTCAAGGTCAACACTCTCGTCAGGT
ACGACGACCTATCCCATAATCATTGATGTACTACAGAAGTCGGAATATCT
AACCTTCCTTTAGACCCGATGGACTGAAGAAGGCCTTCGCCCGTCTAACC
CCTGACGTTGATGCTCTGGACATCGCTGCCACCAAGCTTGCCATCGTCTA
GATACATTTCATTTAGGGTTTGGGTGAATTTTTATTTTGCGCGGTGGTCC
ATAAATATCAGTCATAAAGTTAGCTGCCAATGCTTGAATGAGGGCTGAAT
GATCGTTTCCAAAAAAGAAAGAAGAG
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Coding sequence (CDS) from alignment at KZ851914.1:86521..87646-

>M747DRAFT_295601-T1 ID=M747DRAFT_295601-T1|Name=M747DRAFT_295601-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1860bp|location=Sequence derived from alignment at KZ851914.1:86521..87646- (Aspergillus niger ATCC 13496)
ACCCGATGGACTGAAGAAGGCCTTCGCCCGTCTAACCCCTGACGTTGATG
CTCTGGACATCGCTGCCACCAAGCTTGCCATCGTCTAGGCGCACAAGGCT
CGTAAGGTCCGCACCTCTACGACCTTCCACCGCCCCAAGACCCTTCAGCT
TTCCCGGTCGCCCAAGTACCCCCGCAAGTCGATCCCCCATGTCCCTCGCC
TCGATGCGCACAAGGTCATCCTCTACCCTCTCAACACCGAGAGCGCCATG
AAGAAGATCGAGGAGAACAACACCCTGGTCTTCATCGTCGACGTCAAGTC
CAACAAGCGCCAGATCAAGCTCGCCCTCAAGAAGCTGTACGACGTTGACA
CCGTCAAGGTCAACACTCTCGTCAGGCAAGACCAAGCCCAGCGACAAGGC
TGGTGCTGCCGCCAAGGCAGTCATTAAGGGTGCTGGCATGGCTCCCAAGG
TGGAAAACAAGCAAGACCCGATGGACTGAAGAAGGCCTTCGCCCGTCTAA
CCCCTGACGTTGATGCTCTGGACATCGCTGCCACCAAGCTTGCCATCGTC
TAGGCGCACAAGGCTCGTAAGGTCCGCACCTCTACGACCTTCCACCGCCC
CAAGACCCTTCAGCTTTCCCGGTCGCCCAAGTACCCCCGCAAGTCGATCC
CCCATGTCCCTCGCCTCGATGCGCACAAGGTCATCCTCTACCCTCTCAAC
ACCGAGAGCGCCATGAAGAAGATCGAGGAGAACAACACCCTGGTCTTCAT
CGTCGACGTCAAGTCCAACAAGCGCCAGATCAAGCTCGCCCTCAAGAAGC
TGTACGACGTTGACACCGTCAAGGTCAACACTCTCGTCAGGCAAGACCAA
GCCCAGCGACAAGGCTGGTGCTGCCGCCAAGGCAGTCATTAAGGGTGCTG
GCATGGCTCCCAAGGTGGAAAACAAGCAAGACCCGATGGACTGAAGAAGG
CCTTCGCCCGTCTAACCCCTGACGTTGATGCTCTGGACATCGCTGCCACC
AAGCTTGCCATCGTCTAGGCGCACAAGGCTCGTAAGGTCCGCACCTCTAC
GACCTTCCACCGCCCCAAGACCCTTCAGCTTTCCCGGTCGCCCAAGTACC
CCCGCAAGTCGATCCCCCATGTCCCTCGCCTCGATGCGCACAAGGTCATC
CTCTACCCTCTCAACACCGAGAGCGCCATGAAGAAGATCGAGGAGAACAA
CACCCTGGTCTTCATCGTCGACGTCAAGTCCAACAAGCGCCAGATCAAGC
TCGCCCTCAAGAAGCTGTACGACGTTGACACCGTCAAGGTCAACACTCTC
GTCAGGCAAGACCAAGCCCAGCGACAAGGCTGGTGCTGCCGCCAAGGCAG
TCATTAAGGGTGCTGGCATGGCTCCCAAGGTGGAAAACAAGCAAGACCCG
ATGGACTGAAGAAGGCCTTCGCCCGTCTAACCCCTGACGTTGATGCTCTG
GACATCGCTGCCACCAAGCTTGCCATCGTCTAGGCGCACAAGGCTCGTAA
GGTCCGCACCTCTACGACCTTCCACCGCCCCAAGACCCTTCAGCTTTCCC
GGTCGCCCAAGTACCCCCGCAAGTCGATCCCCCATGTCCCTCGCCTCGAT
GCGCACAAGGTCATCCTCTACCCTCTCAACACCGAGAGCGCCATGAAGAA
GATCGAGGAGAACAACACCCTGGTCTTCATCGTCGACGTCAAGTCCAACA
AGCGCCAGATCAAGCTCGCCCTCAAGAAGCTGTACGACGTTGACACCGTC
AAGGTCAACACTCTCGTCAGGCAAGACCAAGCCCAGCGACAAGGCTGGTG
CTGCCGCCAAGGCAGTCATTAAGGGTGCTGGCATGGCTCCCAAGGTGGAA
AACAAGCAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL23AM747DRAFT_295601Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295601-T1M747DRAFT_295601-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295601-T1.cdsM747DRAFT_295601-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295601-T1.utr3p1M747DRAFT_295601-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295601-T1.exon4M747DRAFT_295601-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_295601-T1.exon3M747DRAFT_295601-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_295601-T1.exon2M747DRAFT_295601-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_295601-T1.exon1M747DRAFT_295601-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295601-T1.utr5p1M747DRAFT_295601-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092657YR
DBxrefInterPro:IPR012678
DBxrefInterPro:IPR005633
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR013025
DBxrefPFAM:PF03939
DBxrefPFAM:PF00276
Product60S ribosomal protein L23A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851914.1supercontigKZ851914.1:86521..87646 -
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