You are here

Home

M747DRAFT_295973-T1, M747DRAFT_295973-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_295973-T1
Unique NameM747DRAFT_295973-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851916.1:85004..86557-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_295973-T1 ID=M747DRAFT_295973-T1|Name=M747DRAFT_295973-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1554bp|location=Sequence derived from alignment at KZ851916.1:85004..86557- (Aspergillus niger ATCC 13496)
AGGGCATTGAGGGTCTTGATTGCAGTAACCAAAGTCAATAAGGTTGAGGC
GATGCTTTCTCCCAAGCTCATGGCTCGGATCAGGCACTAACCCAAAATGG
TGTGCTCGTTTTCGCTTGTTCTTCGCAGTCAGCGGCTGAAGACGTTAAGG
CAGTATATATACAGGGGAGATTTCGAAGATGAAGAAAAAGGCGTGTGCTA
TCACAACTATCTAGTTTTCCTATCAGAACTTGCTTTTGAGTCCCAGTGTC
ACATATTCAGGACGGTACACGATGATGCTTGACAAAAGATCCCCATATCG
TATGGAACCCCTTCCCGCCAAGCCTTCACATTCTATAGTATACACTAACG
CCAAGAAGAGGAGGGAAGCCTCTGGTACTATGCGCCCAGCCAAGGTGCAC
CCATTTCTTTTGCAATAATGTTCGCTGTCTCTGGAATGGTACACATCTAC
CAGTGTTGGTATGTATTCTCACACAAGTGCTATGCACCATGCAGTTCCTA
ACGATGATAACAGCCAATACAAGTCATGGAAAGTGACTGGACTCCTGCCC
TGGTCTGCTCTTCTCTTCACAGCTGGGTTCATAACGCGTACTATCGGCGC
CTTTGGACAGTGGGGGAATGTGGGCATCTACATTGCAAGCACCGTTCTCT
TGCTGGCTGCACCGTGAGTGCTTGTTGATGCGAATTGACCATGAATGTCA
CTGACTAGCGTGCAGACCCGTCTATGAGGGCGCCAACTACTTCACTCTGG
GCCGCATCCTTTACTACATCCCATATCATTCGCCAATTCATCCTGGGCGC
GTTTTCACCACTTTTGTGGCGGTTGGTGTGGTGATTGAAGCTATCACCGG
CAATGGGGCTGCGCTAGTTGCCAATTCCGAGGCGACTGAAGGTAAAAGGA
AGACGGGAGAGGGATTGCTCAAAGCAGCTTTGATCTTGCAACTTGTGTTG
ATGGCAGCATTTGTGGCCTTGGCTGCCAGATTCCACTACAACTGTTCTCG
TGGCGGCGTCTTGAACCACAAGATCAAGCGGGCCTTGTACGTGCTGTATT
GCAGTTGTACCCTCATCACTGTGCGCACGATCTATCGAACAGTGGAATAT
TTTAGCGCTGCGAGCCTCAATGTCTATAGTGGCAACCAGATCAGCCCGAT
CCTCAAGGATGAGTGGTTTTTCTGGGTTTTTGAGGCTGGTGTCATGTACC
TCAACACCATCTTGCTGAATGTCTGCCATCCGATGCAATGGCTTCCACGC
TCCAACAAGATATATCTCGCCACGGATGGCGTTACCGAAATCGAAGGGCC
TGGTTACGACGATCACCGACCAGTCATCCTGACCCTTATTGATCCCTTCG
ACATAGTTGGCCTGATCAAGAACAAAGGTAGACAAGAGAAGTATTGGGAA
GCCGGGCCAGTCGGCAAACTTAACAAGGATACGCCTGGATCGTTTGCCGT
GTAGCTGAGAGCGGGTTGGAATATATGTACTTAGTTATCCTTGAGCCAGG
TCTGAGTGCGACGGCGTTTCGGTTATATAGTATAGAATATTTGTCGTGAT
TATG
back to top

Coding sequence (CDS) from alignment at KZ851916.1:85004..86557-

>M747DRAFT_295973-T1 ID=M747DRAFT_295973-T1|Name=M747DRAFT_295973-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4068bp|location=Sequence derived from alignment at KZ851916.1:85004..86557- (Aspergillus niger ATCC 13496)
ACCCGTCTATGAGGGCGCCAACTACTTCACTCTGGGCCGCATCCTTTACT
ACATCCCATATCATTCGCCAATTCATCCTGGGCGCGTTTTCACCACTTTT
GTGGCGGTTGGTGTGGTGATTGAAGCTATCACCGGCAATGGGGCTGCGCT
AGTTGCCAATTCCGAGGCGACTGAAGGTAAAAGGAAGACGGGAGAGGGAT
TGCTCAAAGCAGCTTTGATCTTGCAACTTGTGTTGATGGCAGCATTTGTG
GCCTTGGCTGCCAGATTCCACTACAACTGTTCTCGTGGCGGCGTCTTGAA
CCACAAGATCAAGCGGGCCTTGTACGTGCTGTATTGCAGTTGTACCCTCA
TCACTGTGCGCACGATCTATCGAACAGTGGAATATTTTAGCGCTGCGAGC
CTCAATGTCTATAGTGGCAACCAGATCAGCCCGATCCTCAAGGATGAGTG
GTTTTTCTGGGTTTTTGAGGCTGGTGTCATGTACCTCAACACCATCTTGC
TGAATGTCTGCCATCCGATGCAATGGCTTCCACGCTCCAACAAGATATAT
CTCGCCACGGATGGCGTTACCGAAATCGAAGGGCCTGGTTACGACGATCA
CCGACCAGTCATCCTGACCCTTATTGATCCCTTCGACATAGTTGGCCTGA
TCAAGAACAAAGGTAGACAAGAGAAGTATTGGGAAGCCGGGCCAGTCGGC
AAACTTAACAAGGATACGCCTGGATCGTTTGCCGTGTAGCCAATACAAGT
CATGGAAAGTGACTGGACTCCTGCCCTGGTCTGCTCTTCTCTTCACAGCT
GGGTTCATAACGCGTACTATCGGCGCCTTTGGACAGTGGGGGAATGTGGG
CATCTACATTGCAAGCACCGTTCTCTTGCTGGCTGCACCAGGAGGGAAGC
CTCTGGTACTATGCGCCCAGCCAAGGTGCACCCATTTCTTTTGCAATAAT
GTTCGCTGTCTCTGGAATGGTACACATCTACCAGTGTTGATGATGCTTGA
CAAAAGATCCCCATATCACCCGTCTATGAGGGCGCCAACTACTTCACTCT
GGGCCGCATCCTTTACTACATCCCATATCATTCGCCAATTCATCCTGGGC
GCGTTTTCACCACTTTTGTGGCGGTTGGTGTGGTGATTGAAGCTATCACC
GGCAATGGGGCTGCGCTAGTTGCCAATTCCGAGGCGACTGAAGGTAAAAG
GAAGACGGGAGAGGGATTGCTCAAAGCAGCTTTGATCTTGCAACTTGTGT
TGATGGCAGCATTTGTGGCCTTGGCTGCCAGATTCCACTACAACTGTTCT
CGTGGCGGCGTCTTGAACCACAAGATCAAGCGGGCCTTGTACGTGCTGTA
TTGCAGTTGTACCCTCATCACTGTGCGCACGATCTATCGAACAGTGGAAT
ATTTTAGCGCTGCGAGCCTCAATGTCTATAGTGGCAACCAGATCAGCCCG
ATCCTCAAGGATGAGTGGTTTTTCTGGGTTTTTGAGGCTGGTGTCATGTA
CCTCAACACCATCTTGCTGAATGTCTGCCATCCGATGCAATGGCTTCCAC
GCTCCAACAAGATATATCTCGCCACGGATGGCGTTACCGAAATCGAAGGG
CCTGGTTACGACGATCACCGACCAGTCATCCTGACCCTTATTGATCCCTT
CGACATAGTTGGCCTGATCAAGAACAAAGGTAGACAAGAGAAGTATTGGG
AAGCCGGGCCAGTCGGCAAACTTAACAAGGATACGCCTGGATCGTTTGCC
GTGTAGCCAATACAAGTCATGGAAAGTGACTGGACTCCTGCCCTGGTCTG
CTCTTCTCTTCACAGCTGGGTTCATAACGCGTACTATCGGCGCCTTTGGA
CAGTGGGGGAATGTGGGCATCTACATTGCAAGCACCGTTCTCTTGCTGGC
TGCACCAGGAGGGAAGCCTCTGGTACTATGCGCCCAGCCAAGGTGCACCC
ATTTCTTTTGCAATAATGTTCGCTGTCTCTGGAATGGTACACATCTACCA
GTGTTGATGATGCTTGACAAAAGATCCCCATATCACCCGTCTATGAGGGC
GCCAACTACTTCACTCTGGGCCGCATCCTTTACTACATCCCATATCATTC
GCCAATTCATCCTGGGCGCGTTTTCACCACTTTTGTGGCGGTTGGTGTGG
TGATTGAAGCTATCACCGGCAATGGGGCTGCGCTAGTTGCCAATTCCGAG
GCGACTGAAGGTAAAAGGAAGACGGGAGAGGGATTGCTCAAAGCAGCTTT
GATCTTGCAACTTGTGTTGATGGCAGCATTTGTGGCCTTGGCTGCCAGAT
TCCACTACAACTGTTCTCGTGGCGGCGTCTTGAACCACAAGATCAAGCGG
GCCTTGTACGTGCTGTATTGCAGTTGTACCCTCATCACTGTGCGCACGAT
CTATCGAACAGTGGAATATTTTAGCGCTGCGAGCCTCAATGTCTATAGTG
GCAACCAGATCAGCCCGATCCTCAAGGATGAGTGGTTTTTCTGGGTTTTT
GAGGCTGGTGTCATGTACCTCAACACCATCTTGCTGAATGTCTGCCATCC
GATGCAATGGCTTCCACGCTCCAACAAGATATATCTCGCCACGGATGGCG
TTACCGAAATCGAAGGGCCTGGTTACGACGATCACCGACCAGTCATCCTG
ACCCTTATTGATCCCTTCGACATAGTTGGCCTGATCAAGAACAAAGGTAG
ACAAGAGAAGTATTGGGAAGCCGGGCCAGTCGGCAAACTTAACAAGGATA
CGCCTGGATCGTTTGCCGTGTAGCCAATACAAGTCATGGAAAGTGACTGG
ACTCCTGCCCTGGTCTGCTCTTCTCTTCACAGCTGGGTTCATAACGCGTA
CTATCGGCGCCTTTGGACAGTGGGGGAATGTGGGCATCTACATTGCAAGC
ACCGTTCTCTTGCTGGCTGCACCAGGAGGGAAGCCTCTGGTACTATGCGC
CCAGCCAAGGTGCACCCATTTCTTTTGCAATAATGTTCGCTGTCTCTGGA
ATGGTACACATCTACCAGTGTTGATGATGCTTGACAAAAGATCCCCATAT
CACCCGTCTATGAGGGCGCCAACTACTTCACTCTGGGCCGCATCCTTTAC
TACATCCCATATCATTCGCCAATTCATCCTGGGCGCGTTTTCACCACTTT
TGTGGCGGTTGGTGTGGTGATTGAAGCTATCACCGGCAATGGGGCTGCGC
TAGTTGCCAATTCCGAGGCGACTGAAGGTAAAAGGAAGACGGGAGAGGGA
TTGCTCAAAGCAGCTTTGATCTTGCAACTTGTGTTGATGGCAGCATTTGT
GGCCTTGGCTGCCAGATTCCACTACAACTGTTCTCGTGGCGGCGTCTTGA
ACCACAAGATCAAGCGGGCCTTGTACGTGCTGTATTGCAGTTGTACCCTC
ATCACTGTGCGCACGATCTATCGAACAGTGGAATATTTTAGCGCTGCGAG
CCTCAATGTCTATAGTGGCAACCAGATCAGCCCGATCCTCAAGGATGAGT
GGTTTTTCTGGGTTTTTGAGGCTGGTGTCATGTACCTCAACACCATCTTG
CTGAATGTCTGCCATCCGATGCAATGGCTTCCACGCTCCAACAAGATATA
TCTCGCCACGGATGGCGTTACCGAAATCGAAGGGCCTGGTTACGACGATC
ACCGACCAGTCATCCTGACCCTTATTGATCCCTTCGACATAGTTGGCCTG
ATCAAGAACAAAGGTAGACAAGAGAAGTATTGGGAAGCCGGGCCAGTCGG
CAAACTTAACAAGGATACGCCTGGATCGTTTGCCGTGTAGCCAATACAAG
TCATGGAAAGTGACTGGACTCCTGCCCTGGTCTGCTCTTCTCTTCACAGC
TGGGTTCATAACGCGTACTATCGGCGCCTTTGGACAGTGGGGGAATGTGG
GCATCTACATTGCAAGCACCGTTCTCTTGCTGGCTGCACCAGGAGGGAAG
CCTCTGGTACTATGCGCCCAGCCAAGGTGCACCCATTTCTTTTGCAATAA
TGTTCGCTGTCTCTGGAATGGTACACATCTACCAGTGTTGATGATGCTTG
ACAAAAGATCCCCATATC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_295973M747DRAFT_295973Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295973-T1M747DRAFT_295973-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295973-T1.cdsM747DRAFT_295973-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295973-T1.utr3p1M747DRAFT_295973-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295973-T1.exon4M747DRAFT_295973-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_295973-T1.exon3M747DRAFT_295973-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_295973-T1.exon2M747DRAFT_295973-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_295973-T1.exon1M747DRAFT_295973-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295973-T1.utr5p1M747DRAFT_295973-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR007568
DBxrefPFAM:PF04479
ProductRTA1 domain protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851916.1supercontigKZ851916.1:85004..86557 -
Powered by Drupal