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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851917.1:544402..545885+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_296279-T1 ID=M747DRAFT_296279-T1|Name=M747DRAFT_296279-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1484bp|location=Sequence derived from alignment at KZ851917.1:544402..545885+ (Aspergillus niger ATCC 13496)
CTTACACGATGTCTTTTCGCAAGAGAAATATTGGACTTTCGGCAGGCGCT
GATCGCACCGGTGCCGTTAATGCTAACGCACAGCCGCAACAGCCTTCTGC
GACGCCAGAATTGACTCCCGGAGTTCGCCCCTCCCCCGACGACGGGCGCC
CGACTACTTCGACTGGTACTCCGTCGCTGGATAACCTTCTGGCTGGGCAT
GGAGGTCTTCCCATCGGGAAGACACTGCTGATTGAGGAGAATGGAACTAC
GGATTTTGCTGGTGCACTGCTAAGATACTATGCGGCAGAGGGTGTTGTGC
AAGATCAAAAGATTCATATCGTGGGAATGCCTGAACAATGGGGAAGAAGT
CTTCCGGGCTTGTTAGGCCCTGCTGATGCTATTGATGACAAGCAAGACAA
ACGGAAAGGCGAGCGCATGAAGATCGCTTGGCGATACGAGCGTCTGGGCG
AGTTCGGAGCAGGAATTGCTGGTTCAAGAGGTATACTATCTTGTCATATT
GTCACTGTGAGAGTTTAGAGGTAGTGTGCTAACAGACACGATTCTGCAGC
GCCCTCAGGAGACCAGAGCCAATCTGCCGCAGACCCAAACGTGGACAAGC
GACCAGCATTCTGCCATGCGTTTGACCTCACGAAACGTCTCACTCACCCA
TCCATAGCCAACCTGAACTATATACCCCTCGCGCCATCGAACGAGCCTTT
GTTTGTGTCGATTCACAAACGTCTTCAAGCTGCAATTGCCTCTTGCCCGC
CAAATACTGTCCATCGCATCCTCATCCCTTCGTTATTAAATCCCACGATA
TACCCACCCGATTCCTGCCAGCCCGACAACCTTCTACCGTTCCTACACTC
CCTCAGGGCTTTGATGAGCGCGCAGGGCGCACGGGTGACGGCGATGATCA
CTCTGCCCTTGTCCCTTTTCCCCCGCGCCACGGGACTTGTGCGATGGATG
GAATTGTTGAGTGACGGTGTCATTGAATTGTGTCCCTTCCCGCACTCTTC
TGATGCTCTCGCAACCTCGGGTGCCGCTACTTCACAGGAGGAACCACCAC
AGGGCATGCTGAAGGTCCATCGACTACCAGTACTGCACGAACGTGGCGGT
GGTAGCGATCAGAACATCGGACAGGATTGGGCTTTCACGCTGAGCCGGAA
GAAGTTCGAAATCAAGCCGTTCAGCTTACCGCCAGCTGAAGGAGACAAGG
AGGGGCAGGATGCAGCGGTAACGGGTGGAATGCCAAAGAAGGCGGATCTT
GAGTTCTAAGTTGCACGAAGGGTGGAACAGCCAAAACCAGACCACAATCA
CTCCTCGTGATCCGAATCGTCCAACATATTCTGCAGCTCGATCTGCTCGG
ACATAGCGGACCCAGTGTTGACCATTGATCGGAGGTAGTGTCTCCCATAT
GAGTCAAGTCCAGGTCCGGCAGGTGATGCTGAGAAATAAGTCCGAAGACG
AGGTGCGATGAATTTCGAGAAGCCTAGATATGCT back to topCoding sequence (CDS) from alignment at KZ851917.1:544402..545885+ >M747DRAFT_296279-T1 ID=M747DRAFT_296279-T1|Name=M747DRAFT_296279-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2364bp|location=Sequence derived from alignment at KZ851917.1:544402..545885+ (Aspergillus niger ATCC 13496)
ATGTCTTTTCGCAAGAGAAATATTGGACTTTCGGCAGGCGCTGATCGCAC
CGGTGCCGTTAATGCTAACGCACAGCCGCAACAGCCTTCTGCGACGCCAG
AATTGACTCCCGGAGTTCGCCCCTCCCCCGACGACGGGCGCCCGACTACT
TCGACTGGTACTCCGTCGCTGGATAACCTTCTGGCTGGGCATGGAGGTCT
TCCCATCGGGAAGACACTGCTGATTGAGGAGAATGGAACTACGGATTTTG
CTGGTGCACTGCTAAGATACTATGCGGCAGAGGGTGTTGTGCAAGATCAA
AAGATTCATATCGTGGGAATGCCTGAACAATGGGGAAGAAGTCTTCCGGG
CTTGTTAGGCCCTGCTGATGCTATTGATGACAAGCAAGACAAACGGAAAG
GCGAGCGCATGAAGATCGCTTGGCGATACGAGCGTCTGGGCGAGTTCGGA
GCAGGAATTGCTGGTTCAAGAGCGCCCTCAGGAGACCAGAGCCAATCTGC
CGCAGACCCAAACGTGGACAAGCGACCAGCATTCTGCCATGCGTTTGACC
TCACGAAACGTCTCACTCACCCATCCATAGCCAACCTGAACTATATACCC
CTCGCGCCATCGAACGAGCCTTTGTTTGTGTCGATTCACAAACGTCTTCA
AGCTGCAATTGCCTCTTGCCCGCCAAATACTGTCCATCGCATCCTCATCC
CTTCGTTATTAAATCCCACGATATACCCACCCGATTCCTGCCAGCCCGAC
AACCTTCTACCGTTCCTACACTCCCTCAGGGCTTTGATGAGCGCGCAGGG
CGCACGGGTGACGGCGATGATCACTCTGCCCTTGTCCCTTTTCCCCCGCG
CCACGGGACTTGTGCGATGGATGGAATTGTTGAGTGACGGTGTCATTGAA
TTGTGTCCCTTCCCGCACTCTTCTGATGCTCTCGCAACCTCGGGTGCCGC
TACTTCACAGGAGGAACCACCACAGGGCATGCTGAAGGTCCATCGACTAC
CAGTACTGCACGAACGTGGCGGTGGTAGCGATCAGAACATCGGACAGGAT
TGGGCTTTCACGCTGAGCCGGAAGAAGTTCGAAATCAAGCCGTTCAGCTT
ACCGCCAGCTGAAGGAGACAAGGAGGGGCAGGATGCAGCGGTAACGGGTG
GAATGCCAAAGAAGGCGGATCTTGAGTTCTAAATGTCTTTTCGCAAGAGA
AATATTGGACTTTCGGCAGGCGCTGATCGCACCGGTGCCGTTAATGCTAA
CGCACAGCCGCAACAGCCTTCTGCGACGCCAGAATTGACTCCCGGAGTTC
GCCCCTCCCCCGACGACGGGCGCCCGACTACTTCGACTGGTACTCCGTCG
CTGGATAACCTTCTGGCTGGGCATGGAGGTCTTCCCATCGGGAAGACACT
GCTGATTGAGGAGAATGGAACTACGGATTTTGCTGGTGCACTGCTAAGAT
ACTATGCGGCAGAGGGTGTTGTGCAAGATCAAAAGATTCATATCGTGGGA
ATGCCTGAACAATGGGGAAGAAGTCTTCCGGGCTTGTTAGGCCCTGCTGA
TGCTATTGATGACAAGCAAGACAAACGGAAAGGCGAGCGCATGAAGATCG
CTTGGCGATACGAGCGTCTGGGCGAGTTCGGAGCAGGAATTGCTGGTTCA
AGAGCGCCCTCAGGAGACCAGAGCCAATCTGCCGCAGACCCAAACGTGGA
CAAGCGACCAGCATTCTGCCATGCGTTTGACCTCACGAAACGTCTCACTC
ACCCATCCATAGCCAACCTGAACTATATACCCCTCGCGCCATCGAACGAG
CCTTTGTTTGTGTCGATTCACAAACGTCTTCAAGCTGCAATTGCCTCTTG
CCCGCCAAATACTGTCCATCGCATCCTCATCCCTTCGTTATTAAATCCCA
CGATATACCCACCCGATTCCTGCCAGCCCGACAACCTTCTACCGTTCCTA
CACTCCCTCAGGGCTTTGATGAGCGCGCAGGGCGCACGGGTGACGGCGAT
GATCACTCTGCCCTTGTCCCTTTTCCCCCGCGCCACGGGACTTGTGCGAT
GGATGGAATTGTTGAGTGACGGTGTCATTGAATTGTGTCCCTTCCCGCAC
TCTTCTGATGCTCTCGCAACCTCGGGTGCCGCTACTTCACAGGAGGAACC
ACCACAGGGCATGCTGAAGGTCCATCGACTACCAGTACTGCACGAACGTG
GCGGTGGTAGCGATCAGAACATCGGACAGGATTGGGCTTTCACGCTGAGC
CGGAAGAAGTTCGAAATCAAGCCGTTCAGCTTACCGCCAGCTGAAGGAGA
CAAGGAGGGGCAGGATGCAGCGGTAACGGGTGGAATGCCAAAGAAGGCGG
ATCTTGAGTTCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0033588 | Elongator holoenzyme complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0002098 | tRNA wobble uridine modification |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008728 |
| DBxref | PFAM:PF05625 |
| Product | PAXNEB-domain-containing protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851917.1 | supercontig | KZ851917.1:544402..545885 + |
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