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M747DRAFT_296501-T1, M747DRAFT_296501-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_296501-T1
Unique NameM747DRAFT_296501-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851919.1:243680..245136+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_296501-T1 ID=M747DRAFT_296501-T1|Name=M747DRAFT_296501-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1457bp|location=Sequence derived from alignment at KZ851919.1:243680..245136+ (Aspergillus niger ATCC 13496)
CTGACTAACGGCGCTCAGGAGGAGGCACGGCCCAACTCGCCGGTCTTTGG
ATCAACGCTCATCCTCCCGAGGTGGCTATCGACCTCTCTTGGATTCCACC
ACCCACTCTCGTCACACCTCAACTTCTCTTCTCTCCGCCTTCGCCTGGGA
CTTCGGTTTGCCCCCCTCACTCAGTCACTGCGCACTTGACTTTGCGGATC
ACTGCCAAACCTATCTGGCTCCCCTTGTTCCTTTCTACTATCTCAATAGC
TTCCGAGACATCGCCAGTACCCCGCCGCAATGTCGACCTCTGCCCGCCGT
CGTCTCATGCGCGACTTCAAGGTGTGTTTATGACGAGCATGGTTCTGAGC
TCGCTTTCTATCCTACGTTTCTACCCTGTCTTTATTTACTTTGCTCTTTT
TTTTTTTGTCCTTTTCCTCCTCCCCGTCTGGTTTTTATACTTGAAGGGCA
CCTGAGATGTTCTGTCGTTGGATACGGTTAGTGGTTGCGTGAGCTAACCT
GACATTCTTTTACGCAGCGTATGCAAACTGACCCTCCTGCTGGAGTTTCT
GCCTCTCCTGTGGCGGACAATGTCATGACCTGGTAAGCTGATCCAGTCAC
ACCTAATGTCGGCCTTTGAGTCCCTAACCTTTGTTACGTCTAGGAACGCC
GTCATCATCGGCCCCGCTGATACTCCCTTTGAAGATGGCACTTTCCGCCT
TGTCATGCACTTCGAGGAGCAGTACCCAAACAAGCCTCCGGGCGTCAAGT
TTATCAGTCAGATGTTCCACCCCAACGTCTACGGTACGGGCGAGCTCTGT
CTGGACATTCTACAGAACCGTTGGAGCCCAACCTATGACGTGGCAGCCAT
CCTGACCAGTATTCAGAGGTACGGACCCTTGCAATCAGGGTAAAGCTGAA
GAAAGATGAAACACGAAACATGCTAACGAGTGTTTTACTGGCTTGTAGTC
TGTTGAACGATCCCAACACATCATCTCCGGCGAATGTAGAAGCGTCAAAC
CTTTACAAAGACAACCGGAAGGAGTACATCAAGCGCGTGCGCGAGACCGT
CGAGAAGAGCTGGGAGGACTAGGATAGTACTGACGTAGAGAAGCTGCGGA
TTATTGTTATGGGTTTTGGTCGCTTGAGGGCACATGGTTATGATGAAGCA
GACTTGTCCGTCTCCGGTGCGACGGAAGCTAACGGCAAGCTGCTGTGATC
CGTTTCATGCGTTTGTGGGGGGACTCCTACCTTGGCTTGATGGAGTCTTA
CACCATTTGATGACGTGCACAGCGTGGGGTTTTGGCGCCTGGTACATTTA
ATATTTCATTCGGTATTGTGGATAGCTGCATTATATTTTTCAGTGTGTTT
TTGCATAATGCATTAACTCTGTCGGGCTCTTGTTTACCTTCGCTGCATGT
CACATAACTCTTATCTCCTCACTGCGTGGCTTTTTGTCCCAGACCAGTTA
GTTTTCA
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Coding sequence (CDS) from alignment at KZ851919.1:243680..245136+

>M747DRAFT_296501-T1 ID=M747DRAFT_296501-T1|Name=M747DRAFT_296501-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1824bp|location=Sequence derived from alignment at KZ851919.1:243680..245136+ (Aspergillus niger ATCC 13496)
ATGTCGACCTCTGCCCGCCGTCGTCTCATGCGCGACTTCAAGCGTATGCA
AACTGACCCTCCTGCTGGAGTTTCTGCCTCTCCTGTGGCGGACAATGTCA
TGACCTGGAACGCCGTCATCATCGGCCCCGCTGATACTCCCTTTGAAGAT
GGCACTTTCCGCCTTGTCATGCACTTCGAGGAGCAGTACCCAAACAAGCC
TCCGGGCGTCAAGTTTATCAGTCAGATGTTCCACCCCAACGTCTACGGTA
CGGGCGAGCTCTGTCTGGACATTCTACAGAACCGTTGGAGCCCAACCTAT
GACGTGGCAGCCATCCTGACCAGTATTCAGAGTCTGTTGAACGATCCCAA
CACATCATCTCCGGCGAATGTAGAAGCGTCAAACCTTTACAAAGACAACC
GGAAGGAGTACATCAAGCGCGTGCGCGAGACCGTCGAGAAGAGCTGGGAG
GACTAGATGTCGACCTCTGCCCGCCGTCGTCTCATGCGCGACTTCAAGCG
TATGCAAACTGACCCTCCTGCTGGAGTTTCTGCCTCTCCTGTGGCGGACA
ATGTCATGACCTGGAACGCCGTCATCATCGGCCCCGCTGATACTCCCTTT
GAAGATGGCACTTTCCGCCTTGTCATGCACTTCGAGGAGCAGTACCCAAA
CAAGCCTCCGGGCGTCAAGTTTATCAGTCAGATGTTCCACCCCAACGTCT
ACGGTACGGGCGAGCTCTGTCTGGACATTCTACAGAACCGTTGGAGCCCA
ACCTATGACGTGGCAGCCATCCTGACCAGTATTCAGAGTCTGTTGAACGA
TCCCAACACATCATCTCCGGCGAATGTAGAAGCGTCAAACCTTTACAAAG
ACAACCGGAAGGAGTACATCAAGCGCGTGCGCGAGACCGTCGAGAAGAGC
TGGGAGGACTAGATGTCGACCTCTGCCCGCCGTCGTCTCATGCGCGACTT
CAAGCGTATGCAAACTGACCCTCCTGCTGGAGTTTCTGCCTCTCCTGTGG
CGGACAATGTCATGACCTGGAACGCCGTCATCATCGGCCCCGCTGATACT
CCCTTTGAAGATGGCACTTTCCGCCTTGTCATGCACTTCGAGGAGCAGTA
CCCAAACAAGCCTCCGGGCGTCAAGTTTATCAGTCAGATGTTCCACCCCA
ACGTCTACGGTACGGGCGAGCTCTGTCTGGACATTCTACAGAACCGTTGG
AGCCCAACCTATGACGTGGCAGCCATCCTGACCAGTATTCAGAGTCTGTT
GAACGATCCCAACACATCATCTCCGGCGAATGTAGAAGCGTCAAACCTTT
ACAAAGACAACCGGAAGGAGTACATCAAGCGCGTGCGCGAGACCGTCGAG
AAGAGCTGGGAGGACTAGATGTCGACCTCTGCCCGCCGTCGTCTCATGCG
CGACTTCAAGCGTATGCAAACTGACCCTCCTGCTGGAGTTTCTGCCTCTC
CTGTGGCGGACAATGTCATGACCTGGAACGCCGTCATCATCGGCCCCGCT
GATACTCCCTTTGAAGATGGCACTTTCCGCCTTGTCATGCACTTCGAGGA
GCAGTACCCAAACAAGCCTCCGGGCGTCAAGTTTATCAGTCAGATGTTCC
ACCCCAACGTCTACGGTACGGGCGAGCTCTGTCTGGACATTCTACAGAAC
CGTTGGAGCCCAACCTATGACGTGGCAGCCATCCTGACCAGTATTCAGAG
TCTGTTGAACGATCCCAACACATCATCTCCGGCGAATGTAGAAGCGTCAA
ACCTTTACAAAGACAACCGGAAGGAGTACATCAAGCGCGTGCGCGAGACC
GTCGAGAAGAGCTGGGAGGACTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
UBC2M747DRAFT_296501Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296501-T1M747DRAFT_296501-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296501-T1.utr5p1M747DRAFT_296501-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296501-T1.exon1M747DRAFT_296501-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_296501-T1.exon2M747DRAFT_296501-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_296501-T1.exon3M747DRAFT_296501-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_296501-T1.exon4M747DRAFT_296501-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296501-T1.cdsM747DRAFT_296501-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296501-T1.utr3p1M747DRAFT_296501-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR023313
DBxrefInterPro:IPR000608
DBxrefInterPro:IPR016135
DBxrefPFAM:PF00179
ProductUbiquitin-conjugating enzyme E2 2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851919.1supercontigKZ851919.1:243680..245136 +
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