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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851919.1:578777..580098+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_296618-T1 ID=M747DRAFT_296618-T1|Name=M747DRAFT_296618-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1322bp|location=Sequence derived from alignment at KZ851919.1:578777..580098+ (Aspergillus niger ATCC 13496)
CCCACTGTCTCGATTTACCTCGTCTGTGAGGTAGTTTTGATCTAGGGATT
GTCCCTCGGGGTTGGCCCATTTCTCTCTGTTCTCATATGATATAACACAG
CTTTTACCAGAGCTCCTTTGTGCTCTCACAAAGCGAGGCCTTGCCTCAAT
TTGGCTTCACTGCCCCCCTTGGCCTTGACCTTCGTTCTACGTCTCTCTCT
CTCAGGTGTGATCTAGGCGCAGCCTTACCACCGCCAACATGTCGCATCTT
CAACAGCAGCTGAAGAGCTTCAACGCTGGTGTTATGGACTATGCAGCCCG
AATGCCCCAGCAGCGTCGTTTCGTGCACAACACCAACTCAGCGAGCAGTT
CCCAGCTCCCCTCCTCTACGTCTACACCTACTCCAAGCGACGATGCGAGA
CGCAAACGGCACGATGCAGATATTGTTTACTCGCAGCCCGCCAACACCGG
CACAGGAAAGGATATCATGACGCAGGTTGTCTTTGCAATCGAGCACATGA
AGTCCAAGGGAGTTCCGCTCAAGTTTGCCGATATCGTCTCGTACCTGTCC
CTTCAACATCGGGCCAACGACCAAGGCTATGTTCAGGCACTCCGGAGCAT
TCTGCAGATGCACGAGAAGGTCCAGTACGATCCCAGCGGCGCAAACGGCG
AAGGCACTTTCAGCTTCCGTCCCCCGCACAACATCCGTACCGCCGAACAG
CTCCTCCAGAAACTCCAGTCCCAGTCGACCGGTGCGGGGATGAGCGTACG
TGAACTTCGGGAGGGTTGGCCAAATGTGGAGGACACGATCAACAAGCTCG
AGAAGGAAGGCAAGCTGCTTGTAACTCGGAACAAGAAGGACGATCATGCC
AAGATGGTTTGGGCCAATGATCCATCCTTGATCCAGCATTTTGATCCTGA
GTTTCGTCAGATCTGGGAGAAGATCAAGGTTCCTGATCAGCAAGCTGTTA
AGGAAGAGCTGGAAAAGGCGGGTATCACACCTACCAACAAGAACAAGGTT
GTCAAGGCCCGGCCAAAGATTGAGAACAAGAAGGTGAAGAAGCCACGACG
GAGTGGGAAGACTACCAATACTCACATGATGGGCGTTTTGAGGGATTATT
CGCACCTCAAACGGTAGTGCTTCGTTGCGCCGCCCCCTGGTTCCGAAAAG
TGTGCCACCGTCTTTTGGGTGTTTTCTTGGGGCTTACATTGCATTATATT
GGCGTTTGTAGGGGTATTAGACATGAGGTTGTTCTATGGTTACCTGTACA
ATTATATTAGCAAAATCGATACCCGGATAATTAAATGGTTATAGAAGCTT
GTCCAGTCTCTTAGTCGCAGAA back to topCoding sequence (CDS) from alignment at KZ851919.1:578777..580098+ >M747DRAFT_296618-T1 ID=M747DRAFT_296618-T1|Name=M747DRAFT_296618-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=879bp|location=Sequence derived from alignment at KZ851919.1:578777..580098+ (Aspergillus niger ATCC 13496)
ATGTCGCATCTTCAACAGCAGCTGAAGAGCTTCAACGCTGGTGTTATGGA
CTATGCAGCCCGAATGCCCCAGCAGCGTCGTTTCGTGCACAACACCAACT
CAGCGAGCAGTTCCCAGCTCCCCTCCTCTACGTCTACACCTACTCCAAGC
GACGATGCGAGACGCAAACGGCACGATGCAGATATTGTTTACTCGCAGCC
CGCCAACACCGGCACAGGAAAGGATATCATGACGCAGGTTGTCTTTGCAA
TCGAGCACATGAAGTCCAAGGGAGTTCCGCTCAAGTTTGCCGATATCGTC
TCGTACCTGTCCCTTCAACATCGGGCCAACGACCAAGGCTATGTTCAGGC
ACTCCGGAGCATTCTGCAGATGCACGAGAAGGTCCAGTACGATCCCAGCG
GCGCAAACGGCGAAGGCACTTTCAGCTTCCGTCCCCCGCACAACATCCGT
ACCGCCGAACAGCTCCTCCAGAAACTCCAGTCCCAGTCGACCGGTGCGGG
GATGAGCGTACGTGAACTTCGGGAGGGTTGGCCAAATGTGGAGGACACGA
TCAACAAGCTCGAGAAGGAAGGCAAGCTGCTTGTAACTCGGAACAAGAAG
GACGATCATGCCAAGATGGTTTGGGCCAATGATCCATCCTTGATCCAGCA
TTTTGATCCTGAGTTTCGTCAGATCTGGGAGAAGATCAAGGTTCCTGATC
AGCAAGCTGTTAAGGAAGAGCTGGAAAAGGCGGGTATCACACCTACCAAC
AAGAACAAGGTTGTCAAGGCCCGGCCAAAGATTGAGAACAAGAAGGTGAA
GAAGCCACGACGGAGTGGGAAGACTACCAATACTCACATGATGGGCGTTT
TGAGGGATTATTCGCACCTCAAACGGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005673 | transcription factor TFIIE complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006367 | transcription initiation from RNA polymerase II promoter |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264CND |
| DBxref | InterPro:IPR003166 |
| DBxref | InterPro:IPR040501 |
| DBxref | InterPro:IPR016656 |
| DBxref | PFAM:PF02186 |
| DBxref | PFAM:PF18121 |
| Product | beta subunit |
| Product | transcription initiation factor TFIIE |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851919.1 | supercontig | KZ851919.1:578777..580098 + |
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