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M747DRAFT_296665-T1, M747DRAFT_296665-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_296665-T1
Unique NameM747DRAFT_296665-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851920.1:136003..137915-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_296665-T1 ID=M747DRAFT_296665-T1|Name=M747DRAFT_296665-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1913bp|location=Sequence derived from alignment at KZ851920.1:136003..137915- (Aspergillus niger ATCC 13496)
TCTTCCCCCCCATTGATTCCCCCCATCCTGTTCCCTTCCTTCACTCTTAC
CTCTTGTCTCCCATTGCTCGGTGTCCTGCTCAATTCCCAAGTCGACAAGC
GACTTCGTCTCCAATCATGTCAACCAAGAAGATCGAGCAGTGGGAAATCG
AACGGTACTGGGAGATCTTCGCATCGCTGGCAGGCGGCCAGCCGCGTCTG
AACAACTCCCAAGCGGCCTCGGTACTCAGGAACAGTCGGCTTCGTGATGA
CCAACTGGAAAAGGTCTGGGACCTGGCAGATGTCGACGGCGATGGCGAAC
TAGACTTTGAGGAGTTCTGTGTTGCCATGCGATTGGTGTTCGACCTTGTG
AACGGGGTATGTGAGCTCCCCTACTGCGGCGCCTCCCGGCCCTCCTGGTG
CTGCATGTCTCCTTTCCCGCCCGCTTCGGCAGTTCAATGATCCCCCACAC
CATTACGTTCCATGCTAATGTATCCAACCCGCAAAGGAATTACAAGCAGT
CCCAAACGTCCTGCCGGACTGGCTCGTGCCCGAATCCAAAGCTCATTTAG
TCCATGCGACCCGAGCCCTGAGCGGTCGTCCGGAGCAGTTCGAGCGGATA
GAAGACGAGGACGATACTCCCGGCCTGAAAGATGGGTTTGAATGGTACAT
GAACCCGTCTGATAAGTCTAAATATGAAGAAATTTATCTCGCGAACAAAA
ACCGCCGCGGGGAAATCTCATGTATGTCCGGGTTCAAGCTACCCCCCAAC
TTCTACCTCCCGAGCCATGAAACTGACATGATGCGGTCTTGTATAGTCGA
ATCATTACAGCCTCTTTACGACTCTCTCGACGTCCCGGACACGGACATCC
GCTCTGCATGGAACTTGGTCAACCCTTCTGCATCCCCGACCATCAACAAA
GACGCTACCCTTGCATTTCTGCATATGCTCAACTACCGCCACGAGGGCTT
CCGCATTCCCCGCGCCATTCCTGCGTCTCTGCGCGCTTCATTCGAGAACA
ACCATATTGACTACCAAGTCGACAATGCCCGTCCCGCCCAGAAATGGGGC
GCAAGCGGCGATACGGAGACCCTCACAGGCCGGAAGGCCAAGTTCGGAGA
TACCTATCTGAGTCGGTTGGGTGCTGGAGGAAAGACCTCCTATACACCCA
AGGGAACAGATTTCAGCGACACCATCCAGGATGAAGAGTGGGAGAAGGTC
CGGTTGAGGCGCGAGCTGGCGGAAATGGAGTCTAAGCTGGATTCCGCTAG
GAAGGCCTCCGAAGGCCGACGCGATCGACCTCGAAACGACGGTCGGCCCA
ACTGGGTGTTGATCAAGAAAGAAGCACTCCAGCTGCTGGAGTACAAGGAG
CGGGAGCTACGGGAGCTGCGTGAAGGCGCAGGCCGATCCAAAGACGGCCA
GAACGTAGAACGTCTCAGAGATGATGTCAAGACCGTTGGCGAGCAGGTCG
AGGGATTGAAGAGCCATCTGGCGCAACGGAAGGAAGTGCTCTCTGATCTG
CGGGCACAGGTCGAAGAGGCAAAGTTGTCCCGATAATCATCTAATCTATT
CCTCGCCCGACTCATCTTCTCCCGTCCTTGATCCAATTTTCTTGAATATA
CTTTCACCTGGGTTGTTTCTGGTATTTTCTTCACTCGCCGTGAGGATTTT
GTTCGCTCACGAGCTTTTCTATTGTGTTGTTGTCGTTGTATAGCCATTTT
CTTGGCGAGGAGCATCAGGCGCTTAATGGATCGATTCGTGTCTCGTGTGT
TTTATTCATTTTTCATACATGCTTCGCTTTCACTAGAGGTGTGATTTGCT
CCCAACCCATCGAAGTCCCTCGATTTGGACTTGCTCTCGCATTACCCGCC
TATTACTTCCTCTTCCTCTTCTAGTCACCCCCTCTATCTAATGTACAGTA
CATAATAAGAACG
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Coding sequence (CDS) from alignment at KZ851920.1:136003..137915-

>M747DRAFT_296665-T1 ID=M747DRAFT_296665-T1|Name=M747DRAFT_296665-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3645bp|location=Sequence derived from alignment at KZ851920.1:136003..137915- (Aspergillus niger ATCC 13496)
TCGAATCATTACAGCCTCTTTACGACTCTCTCGACGTCCCGGACACGGAC
ATCCGCTCTGCATGGAACTTGGTCAACCCTTCTGCATCCCCGACCATCAA
CAAAGACGCTACCCTTGCATTTCTGCATATGCTCAACTACCGCCACGAGG
GCTTCCGCATTCCCCGCGCCATTCCTGCGTCTCTGCGCGCTTCATTCGAG
AACAACCATATTGACTACCAAGTCGACAATGCCCGTCCCGCCCAGAAATG
GGGCGCAAGCGGCGATACGGAGACCCTCACAGGCCGGAAGGCCAAGTTCG
GAGATACCTATCTGAGTCGGTTGGGTGCTGGAGGAAAGACCTCCTATACA
CCCAAGGGAACAGATTTCAGCGACACCATCCAGGATGAAGAGTGGGAGAA
GGTCCGGTTGAGGCGCGAGCTGGCGGAAATGGAGTCTAAGCTGGATTCCG
CTAGGAAGGCCTCCGAAGGCCGACGCGATCGACCTCGAAACGACGGTCGG
CCCAACTGGGTGTTGATCAAGAAAGAAGCACTCCAGCTGCTGGAGTACAA
GGAGCGGGAGCTACGGGAGCTGCGTGAAGGCGCAGGCCGATCCAAAGACG
GCCAGAACGTAGAACGTCTCAGAGATGATGTCAAGACCGTTGGCGAGCAG
GTCGAGGGATTGAAGAGCCATCTGGCGCAACGGAAGGAAGTGCTCTCTGA
TCTGCGGGCACAGGTCGAAGAGGCAAAGTTGTCCCGATAAGAATTACAAG
CAGTCCCAAACGTCCTGCCGGACTGGCTCGTGCCCGAATCCAAAGCTCAT
TTAGTCCATGCGACCCGAGCCCTGAGCGGTCGTCCGGAGCAGTTCGAGCG
GATAGAAGACGAGGACGATACTCCCGGCCTGAAAGATGGGTTTGAATGGT
ACATGAACCCGTCTGATAAGTCTAAATATGAAGAAATTTATCTCGCGAAC
AAAAACCGCCGCGGGGAAATCTCATATGTCAACCAAGAAGATCGAGCAGT
GGGAAATCGAACGGTACTGGGAGATCTTCGCATCGCTGGCAGGCGGCCAG
CCGCGTCTGAACAACTCCCAAGCGGCCTCGGTACTCAGGAACAGTCGGCT
TCGTGATGACCAACTGGAAAAGGTCTGGGACCTGGCAGATGTCGACGGCG
ATGGCGAACTAGACTTTGAGGAGTTCTGTGTTGCCATGCGATTGGTGTTC
GACCTTGTGAACGGGTCGAATCATTACAGCCTCTTTACGACTCTCTCGAC
GTCCCGGACACGGACATCCGCTCTGCATGGAACTTGGTCAACCCTTCTGC
ATCCCCGACCATCAACAAAGACGCTACCCTTGCATTTCTGCATATGCTCA
ACTACCGCCACGAGGGCTTCCGCATTCCCCGCGCCATTCCTGCGTCTCTG
CGCGCTTCATTCGAGAACAACCATATTGACTACCAAGTCGACAATGCCCG
TCCCGCCCAGAAATGGGGCGCAAGCGGCGATACGGAGACCCTCACAGGCC
GGAAGGCCAAGTTCGGAGATACCTATCTGAGTCGGTTGGGTGCTGGAGGA
AAGACCTCCTATACACCCAAGGGAACAGATTTCAGCGACACCATCCAGGA
TGAAGAGTGGGAGAAGGTCCGGTTGAGGCGCGAGCTGGCGGAAATGGAGT
CTAAGCTGGATTCCGCTAGGAAGGCCTCCGAAGGCCGACGCGATCGACCT
CGAAACGACGGTCGGCCCAACTGGGTGTTGATCAAGAAAGAAGCACTCCA
GCTGCTGGAGTACAAGGAGCGGGAGCTACGGGAGCTGCGTGAAGGCGCAG
GCCGATCCAAAGACGGCCAGAACGTAGAACGTCTCAGAGATGATGTCAAG
ACCGTTGGCGAGCAGGTCGAGGGATTGAAGAGCCATCTGGCGCAACGGAA
GGAAGTGCTCTCTGATCTGCGGGCACAGGTCGAAGAGGCAAAGTTGTCCC
GATAAGAATTACAAGCAGTCCCAAACGTCCTGCCGGACTGGCTCGTGCCC
GAATCCAAAGCTCATTTAGTCCATGCGACCCGAGCCCTGAGCGGTCGTCC
GGAGCAGTTCGAGCGGATAGAAGACGAGGACGATACTCCCGGCCTGAAAG
ATGGGTTTGAATGGTACATGAACCCGTCTGATAAGTCTAAATATGAAGAA
ATTTATCTCGCGAACAAAAACCGCCGCGGGGAAATCTCATATGTCAACCA
AGAAGATCGAGCAGTGGGAAATCGAACGGTACTGGGAGATCTTCGCATCG
CTGGCAGGCGGCCAGCCGCGTCTGAACAACTCCCAAGCGGCCTCGGTACT
CAGGAACAGTCGGCTTCGTGATGACCAACTGGAAAAGGTCTGGGACCTGG
CAGATGTCGACGGCGATGGCGAACTAGACTTTGAGGAGTTCTGTGTTGCC
ATGCGATTGGTGTTCGACCTTGTGAACGGGTCGAATCATTACAGCCTCTT
TACGACTCTCTCGACGTCCCGGACACGGACATCCGCTCTGCATGGAACTT
GGTCAACCCTTCTGCATCCCCGACCATCAACAAAGACGCTACCCTTGCAT
TTCTGCATATGCTCAACTACCGCCACGAGGGCTTCCGCATTCCCCGCGCC
ATTCCTGCGTCTCTGCGCGCTTCATTCGAGAACAACCATATTGACTACCA
AGTCGACAATGCCCGTCCCGCCCAGAAATGGGGCGCAAGCGGCGATACGG
AGACCCTCACAGGCCGGAAGGCCAAGTTCGGAGATACCTATCTGAGTCGG
TTGGGTGCTGGAGGAAAGACCTCCTATACACCCAAGGGAACAGATTTCAG
CGACACCATCCAGGATGAAGAGTGGGAGAAGGTCCGGTTGAGGCGCGAGC
TGGCGGAAATGGAGTCTAAGCTGGATTCCGCTAGGAAGGCCTCCGAAGGC
CGACGCGATCGACCTCGAAACGACGGTCGGCCCAACTGGGTGTTGATCAA
GAAAGAAGCACTCCAGCTGCTGGAGTACAAGGAGCGGGAGCTACGGGAGC
TGCGTGAAGGCGCAGGCCGATCCAAAGACGGCCAGAACGTAGAACGTCTC
AGAGATGATGTCAAGACCGTTGGCGAGCAGGTCGAGGGATTGAAGAGCCA
TCTGGCGCAACGGAAGGAAGTGCTCTCTGATCTGCGGGCACAGGTCGAAG
AGGCAAAGTTGTCCCGATAAGAATTACAAGCAGTCCCAAACGTCCTGCCG
GACTGGCTCGTGCCCGAATCCAAAGCTCATTTAGTCCATGCGACCCGAGC
CCTGAGCGGTCGTCCGGAGCAGTTCGAGCGGATAGAAGACGAGGACGATA
CTCCCGGCCTGAAAGATGGGTTTGAATGGTACATGAACCCGTCTGATAAG
TCTAAATATGAAGAAATTTATCTCGCGAACAAAAACCGCCGCGGGGAAAT
CTCATATGTCAACCAAGAAGATCGAGCAGTGGGAAATCGAACGGTACTGG
GAGATCTTCGCATCGCTGGCAGGCGGCCAGCCGCGTCTGAACAACTCCCA
AGCGGCCTCGGTACTCAGGAACAGTCGGCTTCGTGATGACCAACTGGAAA
AGGTCTGGGACCTGGCAGATGTCGACGGCGATGGCGAACTAGACTTTGAG
GAGTTCTGTGTTGCCATGCGATTGGTGTTCGACCTTGTGAACGGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006897endocytosis
GO:0007015actin filament organization
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
END3M747DRAFT_296665Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296665-T1M747DRAFT_296665-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296665-T1.cdsM747DRAFT_296665-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296665-T1.utr3p1M747DRAFT_296665-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296665-T1.exon3M747DRAFT_296665-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_296665-T1.exon2M747DRAFT_296665-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_296665-T1.exon1M747DRAFT_296665-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296665-T1.utr5p1M747DRAFT_296665-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011992
DBxrefInterPro:IPR018247
DBxrefInterPro:IPR025604
DBxrefInterPro:IPR002048
DBxrefInterPro:IPR000261
DBxrefPFAM:PF12761
DBxrefPFAM:PF12763
DBxrefPFAM:PF00036
Productendocytosis defective- protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851920.1supercontigKZ851920.1:136003..137915 -
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