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M747DRAFT_297059-T1, M747DRAFT_297059-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_297059-T1
Unique NameM747DRAFT_297059-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851922.1:456484..457735-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_297059-T1 ID=M747DRAFT_297059-T1|Name=M747DRAFT_297059-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1252bp|location=Sequence derived from alignment at KZ851922.1:456484..457735- (Aspergillus niger ATCC 13496)
CCTCCCTCGGCAACAGGTGCATACGTCGACCAAAATGTCTGAACACGGCG
AAGTCGAGGTCGAAAACCCCGCTGCGGCCTTCCAGGTCCTGCCCAAGGAG
GCTATCGCGGAGATGGGATCCGTGAAGCTGTTCAACAAGTGGAGCTACGA
GGATGTTGAGATCAGGGACATCTCCTTGACGTAGGTGCTTCCCAATCCAT
CGCGATTTTGATTGTTCTACGAGCATGGGTTTATGTCGACCGGTGGAAAA
AACGCCATTATCTGTTGGAAGACAGTGGACTCGGCATGCAGGGAGGAAAA
CGCACGACAATTCGGGATATCTGCGAAGGGAATCACGATGGAAAAATTTT
TTGCGAAATGGCACAGAAACGAGATATGCTGACTCGGCTTCACGTTCAAT
AGCGACTACGTCCAGATCCGCTCCCCTGTCTACCTTCCTCACTCCGCTGG
CCGTTATGCCGCCAAGCGTTTCCGCAAGGCTCAGTGCCCCATCATCGAGC
GCCTGACCAACTCCCTCATGATGAACGGCCGCAACAACGGAAAGAAGCTC
ATGGCTGTCCGCATCGTTGCCCACGCCTTCGAGATCGTACGTCACCTATT
TTCTGCCCCCATTGCCTTCCGCACGCAGAACGGCTAGGGTCTGCAAAATC
CCAGAACCAGACGCAGAAAGCTGACCGGGTAATCTTTTCTAGATCCACAT
CATGACCGACCAGAACCCTCTCCAGGTCGCCGTTGACGCCATTGTCAACT
GCGGTCCTCGCGAAGACAGCACCCGTATCGGTTCCGCTGGTACCGTCCGT
CGTCAGGCCGTCGATGTGTCTCCTCTCCGCCGTGTCAACCAGGCTATTGC
CCTCCTGACCATCGGTGCTCGCGAGGCCTCTTTCCGTAACATCAAGAGCA
TTGCTGAGTGCCTGGCTGAAGAGCTCATCAACGCCGCCAAGGGTTCCTCC
AACTCCTATGCCATCAAGAAGAAGGACGAGCTCGAGCGTGTTGCCAAGTC
CAACCGGTAAAGTGGGAATTTTGGGCGTATTCTCCGTTTGGTCCTGGTTT
TGCGTGTACTGGAGTGGACGGGGGGTTTATTAGGATTCAGTCGATTTGCA
TGCATCTGCGCGACTGTACATACCTGAAAACAGTCACGGGAGGGAGCGAG
ATCCTAAAAATGAGAGAATCGGACGGCTTTCTTCTACAGTAGTTGAGATG
CGATCATGAAGACCTCTGGCTTGTGAAGTCAATACCTTTATCTATTTTTT
TA
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Coding sequence (CDS) from alignment at KZ851922.1:456484..457735-

>M747DRAFT_297059-T1 ID=M747DRAFT_297059-T1|Name=M747DRAFT_297059-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1944bp|location=Sequence derived from alignment at KZ851922.1:456484..457735- (Aspergillus niger ATCC 13496)
ATCCACATCATGACCGACCAGAACCCTCTCCAGGTCGCCGTTGACGCCAT
TGTCAACTGCGGTCCTCGCGAAGACAGCACCCGTATCGGTTCCGCTGGTA
CCGTCCGTCGTCAGGCCGTCGATGTGTCTCCTCTCCGCCGTGTCAACCAG
GCTATTGCCCTCCTGACCATCGGTGCTCGCGAGGCCTCTTTCCGTAACAT
CAAGAGCATTGCTGAGTGCCTGGCTGAAGAGCTCATCAACGCCGCCAAGG
GTTCCTCCAACTCCTATGCCATCAAGAAGAAGGACGAGCTCGAGCGTGTT
GCCAAGTCCAACCGGTAACGACTACGTCCAGATCCGCTCCCCTGTCTACC
TTCCTCACTCCGCTGGCCGTTATGCCGCCAAGCGTTTCCGCAAGGCTCAG
TGCCCCATCATCGAGCGCCTGACCAACTCCCTCATGATGAACGGCCGCAA
CAACGGAAAGAAGCTCATGGCTGTCCGCATCGTTGCCCACGCCTTCGAGA
TCATGTCTGAACACGGCGAAGTCGAGGTCGAAAACCCCGCTGCGGCCTTC
CAGGTCCTGCCCAAGGAGGCTATCGCGGAGATGGGATCCGTGAAGCTGTT
CAACAAGTGGAGCTACGAGGATGTTGAGATCAGGGACATCTCCTTGACAT
CCACATCATGACCGACCAGAACCCTCTCCAGGTCGCCGTTGACGCCATTG
TCAACTGCGGTCCTCGCGAAGACAGCACCCGTATCGGTTCCGCTGGTACC
GTCCGTCGTCAGGCCGTCGATGTGTCTCCTCTCCGCCGTGTCAACCAGGC
TATTGCCCTCCTGACCATCGGTGCTCGCGAGGCCTCTTTCCGTAACATCA
AGAGCATTGCTGAGTGCCTGGCTGAAGAGCTCATCAACGCCGCCAAGGGT
TCCTCCAACTCCTATGCCATCAAGAAGAAGGACGAGCTCGAGCGTGTTGC
CAAGTCCAACCGGTAACGACTACGTCCAGATCCGCTCCCCTGTCTACCTT
CCTCACTCCGCTGGCCGTTATGCCGCCAAGCGTTTCCGCAAGGCTCAGTG
CCCCATCATCGAGCGCCTGACCAACTCCCTCATGATGAACGGCCGCAACA
ACGGAAAGAAGCTCATGGCTGTCCGCATCGTTGCCCACGCCTTCGAGATC
ATGTCTGAACACGGCGAAGTCGAGGTCGAAAACCCCGCTGCGGCCTTCCA
GGTCCTGCCCAAGGAGGCTATCGCGGAGATGGGATCCGTGAAGCTGTTCA
ACAAGTGGAGCTACGAGGATGTTGAGATCAGGGACATCTCCTTGACATCC
ACATCATGACCGACCAGAACCCTCTCCAGGTCGCCGTTGACGCCATTGTC
AACTGCGGTCCTCGCGAAGACAGCACCCGTATCGGTTCCGCTGGTACCGT
CCGTCGTCAGGCCGTCGATGTGTCTCCTCTCCGCCGTGTCAACCAGGCTA
TTGCCCTCCTGACCATCGGTGCTCGCGAGGCCTCTTTCCGTAACATCAAG
AGCATTGCTGAGTGCCTGGCTGAAGAGCTCATCAACGCCGCCAAGGGTTC
CTCCAACTCCTATGCCATCAAGAAGAAGGACGAGCTCGAGCGTGTTGCCA
AGTCCAACCGGTAACGACTACGTCCAGATCCGCTCCCCTGTCTACCTTCC
TCACTCCGCTGGCCGTTATGCCGCCAAGCGTTTCCGCAAGGCTCAGTGCC
CCATCATCGAGCGCCTGACCAACTCCCTCATGATGAACGGCCGCAACAAC
GGAAAGAAGCTCATGGCTGTCCGCATCGTTGCCCACGCCTTCGAGATCAT
GTCTGAACACGGCGAAGTCGAGGTCGAAAACCCCGCTGCGGCCTTCCAGG
TCCTGCCCAAGGAGGCTATCGCGGAGATGGGATCCGTGAAGCTGTTCAAC
AAGTGGAGCTACGAGGATGTTGAGATCAGGGACATCTCCTTGAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015935small ribosomal subunit
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS5M747DRAFT_297059Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297059-T1M747DRAFT_297059-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297059-T1.cdsM747DRAFT_297059-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297059-T1.utr3p1M747DRAFT_297059-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297059-T1.exon3M747DRAFT_297059-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_297059-T1.exon2M747DRAFT_297059-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_297059-T1.exon1M747DRAFT_297059-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297059-T1.utr5p1M747DRAFT_297059-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_8519221.2
DBxrefInterPro:IPR020606
DBxrefInterPro:IPR000235
DBxrefInterPro:IPR023798
DBxrefInterPro:IPR005716
DBxrefInterPro:IPR036823
DBxrefPFAM:PF00177
Productribosomal protein S5
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851922.1supercontigKZ851922.1:456484..457735 -
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